RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 SLURP1P55000 103 aa4.73□□□□□ -1.65
CBWD3-210ENST00000614398 AMMECR1LQ6DCA0 310 aa4.73□□□□□ -1.65
CBWD3-210ENST00000614398 MRPL54Q6P161 138 aaKnown RBP4.73□□□□□ -1.65
CBWD3-210ENST00000614398 MIR17HGQ75NE6 70 aa4.73□□□□□ -1.65
CBWD3-210ENST00000614398 BPIFA4PQ86YQ2 179 aa4.73□□□□□ -1.65
CBWD3-210ENST00000614398 LYPD1Q8N2G4 141 aa4.73□□□□□ -1.65
CBWD3-210ENST00000614398 DLX4Q92988 240 aaPredicted RBP4.73□□□□□ -1.65
CBWD3-210ENST00000614398 ZNF503Q96F45 646 aa4.73□□□□□ -1.65
CBWD3-210ENST00000614398 TXNDC17Q9BRA2 123 aa4.73□□□□□ -1.65
CBWD3-210ENST00000614398 MCRIP2Q9BUT9 160 aaKnown RBP4.73□□□□□ -1.65
CBWD3-210ENST00000614398 PARLQ9H300 379 aa4.73□□□□□ -1.65
CBWD3-210ENST00000614398 NF1P21359 2839 aa4.73□□□□□ -1.65
CBWD3-210ENST00000614398 TRBV7-9A0A0J9YWB2 115 aa4.73□□□□□ -1.65
CBWD3-210ENST00000614398 HIST1H1EP10412 219 aaKnown RBP4.73□□□□□ -1.65
CBWD3-210ENST00000614398 BCL2P10415 239 aa4.73□□□□□ -1.65
CBWD3-210ENST00000614398 GCHFRP30047 84 aa4.73□□□□□ -1.65
CBWD3-210ENST00000614398 SYNJ2BPP57105 145 aa4.73□□□□□ -1.65
CBWD3-210ENST00000614398 DEFB136Q30KP8 78 aa4.73□□□□□ -1.65
CBWD3-210ENST00000614398 SPATA31B1PQ5VZV4 182 aa4.73□□□□□ -1.65
CBWD3-210ENST00000614398 ADAMTSL5Q6ZMM2 481 aa4.73□□□□□ -1.65
CBWD3-210ENST00000614398 FXYD5Q96DB9 178 aa4.73□□□□□ -1.65
CBWD3-210ENST00000614398 MRPL53Q96EL3 112 aaKnown RBP4.73□□□□□ -1.65
CBWD3-210ENST00000614398 SPATA25Q9BR10 227 aa4.73□□□□□ -1.65
CBWD3-210ENST00000614398 SLC25A22Q9H936 323 aa4.73□□□□□ -1.65
CBWD3-210ENST00000614398 TRAPPC1Q9Y5R8 145 aa4.73□□□□□ -1.65
CBWD3-210ENST00000614398 CBLN1P23435 193 aa4.72□□□□□ -1.65
CBWD3-210ENST00000614398 PSG9Q00887 426 aa4.72□□□□□ -1.65
CBWD3-210ENST00000614398 CD300EQ496F6 205 aaPredicted RBP4.72□□□□□ -1.65
CBWD3-210ENST00000614398 MORN5Q5VZ52 161 aa4.72□□□□□ -1.65
CBWD3-210ENST00000614398 CST9LP1Q5W188 147 aa4.72□□□□□ -1.65
CBWD3-210ENST00000614398 C3orf56Q8N813 242 aa4.72□□□□□ -1.65
CBWD3-210ENST00000614398 OR5A1Q8NGJ0 315 aa4.72□□□□□ -1.65
CBWD3-210ENST00000614398 PAXXQ9BUH6 204 aa4.72□□□□□ -1.65
CBWD3-210ENST00000614398 A0A1W2PRE2 83 aa4.72□□□□□ -1.65
CBWD3-210ENST00000614398 ZNF785A8K8V0 405 aa4.72□□□□□ -1.65
CBWD3-210ENST00000614398 NUPR1O60356 82 aa4.72□□□□□ -1.65
CBWD3-210ENST00000614398 IFNA1P01562 189 aa4.72□□□□□ -1.65
CBWD3-210ENST00000614398 ARL14EPLP0DKL9 152 aa4.72□□□□□ -1.65
CBWD3-210ENST00000614398 HSD52Q0P140 79 aa4.72□□□□□ -1.65
CBWD3-210ENST00000614398 NSUN5P1Q3KNT7 163 aa4.72□□□□□ -1.65
CBWD3-210ENST00000614398 TM4SF20Q53R12 229 aa4.72□□□□□ -1.65
CBWD3-210ENST00000614398 LCN15Q6UWW0 184 aa4.72□□□□□ -1.65
CBWD3-210ENST00000614398 Q6ZVH6 145 aa4.72□□□□□ -1.65
CBWD3-210ENST00000614398 C17orf77Q96MU5 243 aa4.72□□□□□ -1.65
CBWD3-210ENST00000614398 SLC50A1Q9BRV3 221 aa4.72□□□□□ -1.65
CBWD3-210ENST00000614398 RHPN1-AS1Q9BWJ2 59 aa4.72□□□□□ -1.65
CBWD3-210ENST00000614398 GEMIN7Q9H840 131 aaKnown RBP4.72□□□□□ -1.65
CBWD3-210ENST00000614398 SPANXA1Q9NS26 97 aa4.72□□□□□ -1.65
CBWD3-210ENST00000614398 ZFHX3Q15911 3703 aa4.72□□□□□ -1.65
CBWD3-210ENST00000614398 TRBV19A0A075B6N1 114 aa4.71□□□□□ -1.65
CBWD3-210ENST00000614398 A0A1W2PRX2 142 aa4.71□□□□□ -1.65
CBWD3-210ENST00000614398 TMEM250H0YL14 139 aa4.71□□□□□ -1.65
CBWD3-210ENST00000614398 SOCS3O14543 225 aa4.71□□□□□ -1.65
CBWD3-210ENST00000614398 SIGLEC15Q6ZMC9 328 aa4.71□□□□□ -1.65
CBWD3-210ENST00000614398 C11orf44Q8N8P7 122 aa4.71□□□□□ -1.65
CBWD3-210ENST00000614398 SPATA3Q8NHX4 192 aa4.71□□□□□ -1.65
CBWD3-210ENST00000614398 SMAD5-AS1Q9Y6J3 95 aa4.71□□□□□ -1.65
CBWD3-210ENST00000614398 CUBNO60494 3623 aa4.71□□□□□ -1.66
CBWD3-210ENST00000614398 TRAV9-2A0A087WT02 112 aa4.71□□□□□ -1.66
CBWD3-210ENST00000614398 GAGE10A6NGK3 116 aa4.71□□□□□ -1.66
CBWD3-210ENST00000614398 IGLV1-51P01701 117 aa4.71□□□□□ -1.66
CBWD3-210ENST00000614398 APOHP02749 345 aaPredicted RBP4.71□□□□□ -1.66
CBWD3-210ENST00000614398 PF4P02776 101 aa4.71□□□□□ -1.66
CBWD3-210ENST00000614398 GPX1P07203 203 aa4.71□□□□□ -1.66
CBWD3-210ENST00000614398 LINC00310P59036 64 aa4.71□□□□□ -1.66
CBWD3-210ENST00000614398 RPL23P62829 140 aaKnown RBP4.71□□□□□ -1.66
CBWD3-210ENST00000614398 HERV-K104P63124 156 aa4.71□□□□□ -1.66
CBWD3-210ENST00000614398 UBE2L3P68036 154 aaKnown RBP4.71□□□□□ -1.66
CBWD3-210ENST00000614398 DEFB114Q30KQ6 69 aa4.71□□□□□ -1.66
CBWD3-210ENST00000614398 BVES-AS1Q5T3Y7 98 aa4.71□□□□□ -1.66
CBWD3-210ENST00000614398 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.71□□□□□ -1.66
CBWD3-210ENST00000614398 OR8I2Q8N0Y5 310 aa4.71□□□□□ -1.66
CBWD3-210ENST00000614398 OTORQ9NRC9 128 aa4.71□□□□□ -1.66
CBWD3-210ENST00000614398 TP53TG3Q9ULZ0 132 aa4.71□□□□□ -1.66
CBWD3-210ENST00000614398 TRAV5A0A0B4J249 113 aa4.7□□□□□ -1.66
CBWD3-210ENST00000614398 IGHV3-35A0A0C4DH35 117 aa4.7□□□□□ -1.66
CBWD3-210ENST00000614398 J3QR89 54 aa4.7□□□□□ -1.66
CBWD3-210ENST00000614398 K7EQM0 130 aa4.7□□□□□ -1.66
CBWD3-210ENST00000614398 CMC4P56277 68 aaPredicted RBP4.7□□□□□ -1.66
CBWD3-210ENST00000614398 C9orf66Q5T8R8 295 aa4.7□□□□□ -1.66
CBWD3-210ENST00000614398 FOXI2Q6ZQN5 318 aa4.7□□□□□ -1.66
CBWD3-210ENST00000614398 SPAG8Q99932 426 aaPredicted RBP4.7□□□□□ -1.66
CBWD3-210ENST00000614398 NIPBLQ6KC79 2804 aaeCLIP4.7□□□□□ -1.66
CBWD3-210ENST00000614398 LOC102724200A0A096LPH7 203 aaPredicted RBP4.7□□□□□ -1.66
CBWD3-210ENST00000614398 TRBV6-1A0A0K0K1D8 114 aa4.7□□□□□ -1.66
CBWD3-210ENST00000614398 FBLL1A6NHQ2 334 aaKnown RBP4.7□□□□□ -1.66
CBWD3-210ENST00000614398 K7EP34 96 aa4.7□□□□□ -1.66
CBWD3-210ENST00000614398 K7EQG2 157 aa4.7□□□□□ -1.66
CBWD3-210ENST00000614398 SLC17A3O00476 420 aa4.7□□□□□ -1.66
CBWD3-210ENST00000614398 ISLRO14498 428 aa4.7□□□□□ -1.66
CBWD3-210ENST00000614398 PDE6DO43924 150 aa4.7□□□□□ -1.66
CBWD3-210ENST00000614398 NDUFB4O95168 129 aa4.7□□□□□ -1.66
CBWD3-210ENST00000614398 COX19Q49B96 90 aa4.7□□□□□ -1.66
CBWD3-210ENST00000614398 PRR31Q5SQ13 230 aa4.7□□□□□ -1.66
CBWD3-210ENST00000614398 C11orf52Q96A22 123 aa4.7□□□□□ -1.66
CBWD3-210ENST00000614398 NRN1Q9NPD7 142 aa4.7□□□□□ -1.66
CBWD3-210ENST00000614398 ZNF331Q9NQX6 463 aaPredicted RBP4.7□□□□□ -1.66
CBWD3-210ENST00000614398 MRPL16Q9NX20 251 aaKnown RBP4.7□□□□□ -1.66
CBWD3-210ENST00000614398 TEP1Q99973 2627 aaKnown RBP4.69□□□□□ -1.66
CBWD3-210ENST00000614398 GAGE12HA6NDE8 117 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms