RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 LINC00479Q96M42 142 aa11.9□□□□□ -0.5
IRF1-211ENST00000613424 PYGO2Q9BRQ0 406 aa11.9□□□□□ -0.5
IRF1-211ENST00000613424 PSG8Q9UQ74 426 aa11.9□□□□□ -0.5
IRF1-211ENST00000613424 PEX7O00628 323 aa11.89□□□□□ -0.51
IRF1-211ENST00000613424 ATP5G3P48201 142 aa11.89□□□□□ -0.51
IRF1-211ENST00000613424 PPT1P50897 306 aa11.89□□□□□ -0.51
IRF1-211ENST00000613424 TMEM75Q8N9X5 138 aa11.89□□□□□ -0.51
IRF1-211ENST00000613424 HIST1H2BAQ96A08 127 aa11.89□□□□□ -0.51
IRF1-211ENST00000613424 TREM1Q9NP99 234 aa11.89□□□□□ -0.51
IRF1-211ENST00000613424 DKK2Q9UBU2 259 aa11.89□□□□□ -0.51
IRF1-211ENST00000613424 TRAV34A0A0B4J273 112 aa11.88□□□□□ -0.51
IRF1-211ENST00000613424 PLAC8L1A1L4L8 177 aa11.88□□□□□ -0.51
IRF1-211ENST00000613424 TEX46H3BTG2 121 aa11.88□□□□□ -0.51
IRF1-211ENST00000613424 SPART-AS1P0CW21 52 aa11.88□□□□□ -0.51
IRF1-211ENST00000613424 FLI1Q01543 452 aaPredicted RBP11.88□□□□□ -0.51
IRF1-211ENST00000613424 C12orf74Q32Q52 190 aa11.88□□□□□ -0.51
IRF1-211ENST00000613424 FAM222AQ5U5X8 452 aa11.88□□□□□ -0.51
IRF1-211ENST00000613424 PRNTQ86SH4 94 aa11.88□□□□□ -0.51
IRF1-211ENST00000613424 C16orf74Q96GX8 76 aa11.88□□□□□ -0.51
IRF1-211ENST00000613424 PLECQ15149 4684 aaKnown RBP11.88□□□□□ -0.51
IRF1-211ENST00000613424 FBLL1A6NHQ2 334 aaKnown RBP11.87□□□□□ -0.51
IRF1-211ENST00000613424 F6UZH7 168 aa11.87□□□□□ -0.51
IRF1-211ENST00000613424 Q6AWC8 147 aa11.87□□□□□ -0.51
IRF1-211ENST00000613424 ZNF493Q6ZR52 646 aa11.87□□□□□ -0.51
IRF1-211ENST00000613424 ZNF767PQ75MW2 155 aa11.87□□□□□ -0.51
IRF1-211ENST00000613424 RNASE8Q8TDE3 154 aaKnown RBP11.87□□□□□ -0.51
IRF1-211ENST00000613424 TMEM263Q8WUH6 116 aaKnown RBP11.87□□□□□ -0.51
IRF1-211ENST00000613424 PHLDA1Q8WV24 401 aaPredicted RBP11.87□□□□□ -0.51
IRF1-211ENST00000613424 LINC00467Q9BRT7 94 aa11.87□□□□□ -0.51
IRF1-211ENST00000613424 NDFIP1Q9BT67 221 aa11.87□□□□□ -0.51
IRF1-211ENST00000613424 EIF4E3Q8N5X7 224 aaKnown RBP11.86□□□□□ -0.51
IRF1-211ENST00000613424 C8orf49Q96NF6 230 aa11.86□□□□□ -0.51
IRF1-211ENST00000613424 TCEAL7Q9BRU2 100 aa11.86□□□□□ -0.51
IRF1-211ENST00000613424 MANBALQ9NQG1 85 aa11.86□□□□□ -0.51
IRF1-211ENST00000613424 GNG13Q9P2W3 67 aa11.86□□□□□ -0.51
IRF1-211ENST00000613424 IGHV1OR15-1A0A075B7D0 117 aa11.85□□□□□ -0.51
IRF1-211ENST00000613424 TEX48A0A1B0GUV7 120 aa11.85□□□□□ -0.51
IRF1-211ENST00000613424 RGS13O14921 159 aa11.85□□□□□ -0.51
IRF1-211ENST00000613424 SAPCD1Q5SSQ6 148 aa11.85□□□□□ -0.51
IRF1-211ENST00000613424 CEMP1Q6PRD7 247 aaPredicted RBP11.85□□□□□ -0.51
IRF1-211ENST00000613424 Q6ZTC4 211 aa11.85□□□□□ -0.51
IRF1-211ENST00000613424 NUPR2A6NF83 97 aa11.84□□□□□ -0.51
IRF1-211ENST00000613424 CBY3A6NI87 242 aa11.84□□□□□ -0.51
IRF1-211ENST00000613424 LYRM9A8MSI8 78 aa11.84□□□□□ -0.51
IRF1-211ENST00000613424 C11orf94C9JXX5 98 aa11.84□□□□□ -0.51
IRF1-211ENST00000613424 BLOC1S1P78537 153 aa11.84□□□□□ -0.51
IRF1-211ENST00000613424 ANXA2RQ3ZCQ2 193 aa11.84□□□□□ -0.51
IRF1-211ENST00000613424 NOP10Q9NPE3 64 aaKnown RBP11.84□□□□□ -0.51
IRF1-211ENST00000613424 TP53TG3Q9ULZ0 132 aa11.84□□□□□ -0.51
IRF1-211ENST00000613424 KLF12Q9Y4X4 402 aa11.84□□□□□ -0.51
IRF1-211ENST00000613424 TIMM8BQ9Y5J9 83 aaPredicted RBP11.84□□□□□ -0.51
IRF1-211ENST00000613424 TRAV21A0A0B4J279 112 aa11.83□□□□□ -0.52
IRF1-211ENST00000613424 SCO2A0A1W2PP80 73 aa11.83□□□□□ -0.52
IRF1-211ENST00000613424 ZNF80P51504 273 aaPredicted RBP11.83□□□□□ -0.52
IRF1-211ENST00000613424 SMUG1Q53HV7 270 aa11.83□□□□□ -0.52
IRF1-211ENST00000613424 MUC21Q5SSG8 566 aa11.83□□□□□ -0.52
IRF1-211ENST00000613424 FMC1Q96HJ9 113 aa11.83□□□□□ -0.52
IRF1-211ENST00000613424 SNURFLB1AK76 121 aa11.82□□□□□ -0.52
IRF1-211ENST00000613424 AKR1C3P42330 323 aa11.82□□□□□ -0.52
IRF1-211ENST00000613424 DAD1P61803 113 aa11.82□□□□□ -0.52
IRF1-211ENST00000613424 UBE2G1P62253 170 aa11.82□□□□□ -0.52
IRF1-211ENST00000613424 TMEM183BQ1AE95 376 aa11.82□□□□□ -0.52
IRF1-211ENST00000613424 FAM159AQ6UWV7 190 aa11.82□□□□□ -0.52
IRF1-211ENST00000613424 Q86TA4 180 aa11.82□□□□□ -0.52
IRF1-211ENST00000613424 C11orf72Q8NBR9 251 aa11.82□□□□□ -0.52
IRF1-211ENST00000613424 ZNF680Q8NEM1 530 aa11.82□□□□□ -0.52
IRF1-211ENST00000613424 GSN-AS1Q9NRJ2 163 aa11.82□□□□□ -0.52
IRF1-211ENST00000613424 TRAV10A0A0B4J240 114 aa11.81□□□□□ -0.52
IRF1-211ENST00000613424 TRBV6-1A0A0K0K1D8 114 aa11.81□□□□□ -0.52
IRF1-211ENST00000613424 GCGP01275 180 aa11.81□□□□□ -0.52
IRF1-211ENST00000613424 IFNA1P01562 189 aa11.81□□□□□ -0.52
IRF1-211ENST00000613424 DEFB130BP0DP73 79 aa11.81□□□□□ -0.52
IRF1-211ENST00000613424 DEFB130AP0DP74 79 aa11.81□□□□□ -0.52
IRF1-211ENST00000613424 C2CD4CQ8TF44 421 aa11.81□□□□□ -0.52
IRF1-211ENST00000613424 TXNDC17Q9BRA2 123 aa11.81□□□□□ -0.52
IRF1-211ENST00000613424 ZFP30Q9Y2G7 519 aa11.81□□□□□ -0.52
IRF1-211ENST00000613424 KLK5Q9Y337 293 aaPredicted RBP11.81□□□□□ -0.52
IRF1-211ENST00000613424 TENM2Q9NT68 2774 aa11.8□□□□□ -0.52
IRF1-211ENST00000613424 DEFB131BA0A096LNP1 70 aa11.8□□□□□ -0.52
IRF1-211ENST00000613424 TDRG1Q3Y452 100 aa11.8□□□□□ -0.52
IRF1-211ENST00000613424 LYPD6BQ8NI32 183 aa11.8□□□□□ -0.52
IRF1-211ENST00000613424 NAGKQ9UJ70 344 aa11.8□□□□□ -0.52
IRF1-211ENST00000613424 KMT2CQ8NEZ4 4911 aaKnown RBP11.8□□□□□ -0.52
IRF1-211ENST00000613424 LYSTQ99698 3801 aa11.79□□□□□ -0.52
IRF1-211ENST00000613424 GNRH2O43555 120 aa11.79□□□□□ -0.52
IRF1-211ENST00000613424 LTAP01374 205 aa11.79□□□□□ -0.52
IRF1-211ENST00000613424 S100A9P06702 114 aaKnown RBP11.79□□□□□ -0.52
IRF1-211ENST00000613424 PFN1P07737 140 aaKnown RBP11.79□□□□□ -0.52
IRF1-211ENST00000613424 BCL2P10415 239 aa11.79□□□□□ -0.52
IRF1-211ENST00000613424 DAZ2Q13117 558 aaKnown RBP11.79□□□□□ -0.52
IRF1-211ENST00000613424 IBA57Q5T440 356 aaKnown RBP11.79□□□□□ -0.52
IRF1-211ENST00000613424 TEX261Q6UWH6 196 aa11.79□□□□□ -0.52
IRF1-211ENST00000613424 C11orf21Q9P2W6 132 aa11.79□□□□□ -0.52
IRF1-211ENST00000613424 TCL1AP56279 114 aa11.78□□□□□ -0.52
IRF1-211ENST00000613424 MEF2BQ02080 365 aaPredicted RBP11.78□□□□□ -0.52
IRF1-211ENST00000613424 COX8CQ7Z4L0 72 aa11.78□□□□□ -0.52
IRF1-211ENST00000613424 TMEM183AQ8IXX5 376 aa11.78□□□□□ -0.52
IRF1-211ENST00000613424 C11orf52Q96A22 123 aa11.78□□□□□ -0.52
IRF1-211ENST00000613424 ZC2HC1AQ96GY0 325 aa11.78□□□□□ -0.52
IRF1-211ENST00000613424 MDFICQ9P1T7 246 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms