RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 FAM162BQ5T6X4 162 aa12.96□□□□□ -0.33
SREK1-216ENST00000612404 COX8CQ7Z4L0 72 aa12.96□□□□□ -0.33
SREK1-216ENST00000612404 ZFAND2AQ8N6M9 145 aa12.96□□□□□ -0.33
SREK1-216ENST00000612404 C15orf54Q8N8G6 183 aa12.96□□□□□ -0.33
SREK1-216ENST00000612404 OR10G8Q8NGN5 311 aa12.96□□□□□ -0.33
SREK1-216ENST00000612404 TRBV7-9A0A0J9YWB2 115 aa12.95□□□□□ -0.34
SREK1-216ENST00000612404 RNASE4P34096 147 aaKnown RBP12.95□□□□□ -0.34
SREK1-216ENST00000612404 LEPP41159 167 aa12.95□□□□□ -0.34
SREK1-216ENST00000612404 FXYD7P58549 80 aa12.95□□□□□ -0.34
SREK1-216ENST00000612404 KIR3DS1Q14943 382 aa12.95□□□□□ -0.34
SREK1-216ENST00000612404 SPINK13Q1W4C9 94 aa12.95□□□□□ -0.34
SREK1-216ENST00000612404 PRR9Q5T870 116 aa12.95□□□□□ -0.34
SREK1-216ENST00000612404 DEFB125Q8N687 156 aa12.95□□□□□ -0.34
SREK1-216ENST00000612404 NUDT10Q8NFP7 164 aa12.95□□□□□ -0.34
SREK1-216ENST00000612404 NUDT11Q96G61 164 aa12.95□□□□□ -0.34
SREK1-216ENST00000612404 ODF3Q96PU9 254 aa12.95□□□□□ -0.34
SREK1-216ENST00000612404 CRISP2P16562 243 aa12.95□□□□□ -0.34
SREK1-216ENST00000612404 AMTNQ6UX39 209 aa12.95□□□□□ -0.34
SREK1-216ENST00000612404 RBMY1BA6NDE4 496 aaKnown RBP12.94□□□□□ -0.34
SREK1-216ENST00000612404 RBMY1EA6NEQ0 496 aaKnown RBP12.94□□□□□ -0.34
SREK1-216ENST00000612404 SH2D1AO60880 128 aa12.94□□□□□ -0.34
SREK1-216ENST00000612404 P01737 135 aa12.94□□□□□ -0.34
SREK1-216ENST00000612404 RBMY1DP0C7P1 496 aaKnown RBP12.94□□□□□ -0.34
SREK1-216ENST00000612404 TSPOP30536 169 aa12.94□□□□□ -0.34
SREK1-216ENST00000612404 ANAPC16Q96DE5 110 aa12.94□□□□□ -0.34
SREK1-216ENST00000612404 OSTCQ9NRP0 149 aa12.94□□□□□ -0.34
SREK1-216ENST00000612404 NOTCH1P46531 2555 aa12.94□□□□□ -0.34
SREK1-216ENST00000612404 MGAM2Q2M2H8 2515 aa12.94□□□□□ -0.34
SREK1-216ENST00000612404 TRAV12-2A0A075B6T6 113 aa12.94□□□□□ -0.34
SREK1-216ENST00000612404 C19orf71A6NCJ1 209 aa12.94□□□□□ -0.34
SREK1-216ENST00000612404 ZNF705GA8MUZ8 300 aaPredicted RBP12.94□□□□□ -0.34
SREK1-216ENST00000612404 H7BYZ3 331 aa12.94□□□□□ -0.34
SREK1-216ENST00000612404 CDKN1BP46527 198 aa12.94□□□□□ -0.34
SREK1-216ENST00000612404 BTN1A1Q13410 526 aa12.94□□□□□ -0.34
SREK1-216ENST00000612404 FAM231DQ6ZW35 169 aa12.94□□□□□ -0.34
SREK1-216ENST00000612404 A0A087WWC5 75 aa12.93□□□□□ -0.34
SREK1-216ENST00000612404 A8MTW9 85 aa12.93□□□□□ -0.34
SREK1-216ENST00000612404 FABP5P3A8MUU1 101 aa12.93□□□□□ -0.34
SREK1-216ENST00000612404 G3V4G9 280 aa12.93□□□□□ -0.34
SREK1-216ENST00000612404 PPP1R2P9O14990 202 aa12.93□□□□□ -0.34
SREK1-216ENST00000612404 PFN1P07737 140 aaKnown RBP12.93□□□□□ -0.34
SREK1-216ENST00000612404 TRPT1Q86TN4 253 aaKnown RBP12.93□□□□□ -0.34
SREK1-216ENST00000612404 CTDSP1Q9GZU7 261 aa12.93□□□□□ -0.34
SREK1-216ENST00000612404 NBEAL1Q6ZS30 2694 aa12.93□□□□□ -0.34
SREK1-216ENST00000612404 KLLNB2CW77 178 aa12.92□□□□□ -0.34
SREK1-216ENST00000612404 GATCO43716 136 aaKnown RBP12.92□□□□□ -0.34
SREK1-216ENST00000612404 KRTAP10-11P60412 298 aa12.92□□□□□ -0.34
SREK1-216ENST00000612404 TMEM88Q6PEY1 159 aa12.92□□□□□ -0.34
SREK1-216ENST00000612404 Q6ZQT7 251 aa12.92□□□□□ -0.34
SREK1-216ENST00000612404 V9GYV3 84 aa12.92□□□□□ -0.34
SREK1-216ENST00000612404 RPL35AP18077 110 aaKnown RBP12.91□□□□□ -0.34
SREK1-216ENST00000612404 CLUHP3Q96NS8 147 aa12.91□□□□□ -0.34
SREK1-216ENST00000612404 RPP21Q9H633 154 aaKnown RBP12.91□□□□□ -0.34
SREK1-216ENST00000612404 TRAV12-3A0A0B4J271 114 aa12.91□□□□□ -0.34
SREK1-216ENST00000612404 CA1P00915 261 aaPredicted RBP12.91□□□□□ -0.34
SREK1-216ENST00000612404 ORM1P02763 201 aa12.91□□□□□ -0.34
SREK1-216ENST00000612404 NUTF2P61970 127 aaKnown RBP12.91□□□□□ -0.34
SREK1-216ENST00000612404 EGFEM1PQ0D2K5 195 aa12.91□□□□□ -0.34
SREK1-216ENST00000612404 GFI1BQ5VTD9 330 aa12.91□□□□□ -0.34
SREK1-216ENST00000612404 CBLN2Q8IUK8 224 aa12.91□□□□□ -0.34
SREK1-216ENST00000612404 Q8N1Y9 231 aa12.91□□□□□ -0.34
SREK1-216ENST00000612404 SRD5A3Q9H8P0 318 aa12.91□□□□□ -0.34
SREK1-216ENST00000612404 ZMAT5Q9UDW3 170 aaKnown RBP12.91□□□□□ -0.34
SREK1-216ENST00000612404 TRAV21A0A0B4J279 112 aa12.9□□□□□ -0.34
SREK1-216ENST00000612404 C7orf71A4D174 169 aa12.9□□□□□ -0.34
SREK1-216ENST00000612404 RPL19P84098 196 aaKnown RBP12.9□□□□□ -0.34
SREK1-216ENST00000612404 OR2D3Q8NGH3 330 aa12.9□□□□□ -0.34
SREK1-216ENST00000612404 TMSB15BA0A087X1C1 80 aa12.89□□□□□ -0.35
SREK1-216ENST00000612404 TMEM242Q9NWH2 141 aa12.89□□□□□ -0.35
SREK1-216ENST00000612404 NAGKQ9UJ70 344 aa12.89□□□□□ -0.35
SREK1-216ENST00000612404 Q6AWC8 147 aa12.89□□□□□ -0.35
SREK1-216ENST00000612404 DNHD1Q96M86 4753 aa12.89□□□□□ -0.35
SREK1-216ENST00000612404 TMEM189A5PLL7 270 aa12.88□□□□□ -0.35
SREK1-216ENST00000612404 SAMD5Q5TGI4 173 aa12.88□□□□□ -0.35
SREK1-216ENST00000612404 SMCO4Q9NRQ5 59 aa12.88□□□□□ -0.35
SREK1-216ENST00000612404 C11orf21Q9P2W6 132 aa12.88□□□□□ -0.35
SREK1-216ENST00000612404 XCL2Q9UBD3 114 aa12.88□□□□□ -0.35
SREK1-216ENST00000612404 URGCP-MRPS24S4R325 110 aa12.88□□□□□ -0.35
SREK1-216ENST00000612404 DNAH3Q8TD57 4116 aa12.88□□□□□ -0.35
SREK1-216ENST00000612404 CRXO43186 299 aaPredicted RBP12.87□□□□□ -0.35
SREK1-216ENST00000612404 MUC21Q5SSG8 566 aa12.87□□□□□ -0.35
SREK1-216ENST00000612404 TUBA4BQ9H853 241 aa12.87□□□□□ -0.35
SREK1-216ENST00000612404 GZMBP10144 247 aa12.86□□□□□ -0.35
SREK1-216ENST00000612404 TCL1AP56279 114 aa12.86□□□□□ -0.35
SREK1-216ENST00000612404 KRTAP21-3Q3LHN1 58 aa12.86□□□□□ -0.35
SREK1-216ENST00000612404 IL36BQ9NZH7 164 aa12.86□□□□□ -0.35
SREK1-216ENST00000612404 A8MWL6 223 aa12.86□□□□□ -0.35
SREK1-216ENST00000612404 ZNF324O75467 553 aaPredicted RBP12.86□□□□□ -0.35
SREK1-216ENST00000612404 CT83Q5H943 113 aa12.86□□□□□ -0.35
SREK1-216ENST00000612404 CXorf65A6NEN9 183 aa12.85□□□□□ -0.35
SREK1-216ENST00000612404 INSP01308 110 aa12.85□□□□□ -0.35
SREK1-216ENST00000612404 AMBPP02760 352 aa12.85□□□□□ -0.35
SREK1-216ENST00000612404 LINC01559Q495D7 138 aa12.85□□□□□ -0.35
SREK1-216ENST00000612404 TSKUQ8WUA8 353 aa12.85□□□□□ -0.35
SREK1-216ENST00000612404 IGKV3D-20A0A0C4DH25 116 aa12.85□□□□□ -0.35
SREK1-216ENST00000612404 XKRY2A2RUG3 117 aa12.85□□□□□ -0.35
SREK1-216ENST00000612404 S100PP25815 95 aa12.85□□□□□ -0.35
SREK1-216ENST00000612404 FAM3BP58499 235 aaPredicted RBP12.85□□□□□ -0.35
SREK1-216ENST00000612404 MORN3Q6PF18 240 aaPredicted RBP12.85□□□□□ -0.35
SREK1-216ENST00000612404 GRIFINA4D1Z8 144 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms