RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 ATG101Q9BSB4 218 aa5□□□□□ -1.61
PTCHD3P1-201ENST00000612350 C1QTNF4Q9BXJ3 329 aa5□□□□□ -1.61
PTCHD3P1-201ENST00000612350 SH3BGRL3Q9H299 93 aa5□□□□□ -1.61
PTCHD3P1-201ENST00000612350 AAMDCQ9H7C9 122 aa5□□□□□ -1.61
PTCHD3P1-201ENST00000612350 ZNF586Q9NXT0 402 aa5□□□□□ -1.61
PTCHD3P1-201ENST00000612350 A0A0J9YX75 114 aa4.99□□□□□ -1.61
PTCHD3P1-201ENST00000612350 CTXND1A0A1B0GTU2 59 aa4.99□□□□□ -1.61
PTCHD3P1-201ENST00000612350 A8MTW9 85 aa4.99□□□□□ -1.61
PTCHD3P1-201ENST00000612350 CXorf1O96002 111 aa4.99□□□□□ -1.61
PTCHD3P1-201ENST00000612350 OXTP01178 125 aa4.99□□□□□ -1.61
PTCHD3P1-201ENST00000612350 SPART-AS1P0CW21 52 aa4.99□□□□□ -1.61
PTCHD3P1-201ENST00000612350 PYYP10082 97 aa4.99□□□□□ -1.61
PTCHD3P1-201ENST00000612350 UBE2L3P68036 154 aaKnown RBP4.99□□□□□ -1.61
PTCHD3P1-201ENST00000612350 FAM74A1Q5RGS3 127 aa4.99□□□□□ -1.61
PTCHD3P1-201ENST00000612350 FAM122CQ6P4D5 195 aa4.99□□□□□ -1.61
PTCHD3P1-201ENST00000612350 ZNF738Q8NE65 137 aa4.99□□□□□ -1.61
PTCHD3P1-201ENST00000612350 SVIPQ8NHG7 77 aa4.99□□□□□ -1.61
PTCHD3P1-201ENST00000612350 SUN5Q8TC36 379 aa4.99□□□□□ -1.61
PTCHD3P1-201ENST00000612350 RXFP4Q8TDU9 374 aa4.99□□□□□ -1.61
PTCHD3P1-201ENST00000612350 RAB24Q969Q5 203 aa4.99□□□□□ -1.61
PTCHD3P1-201ENST00000612350 FXYD5Q96DB9 178 aa4.99□□□□□ -1.61
PTCHD3P1-201ENST00000612350 TMEM167BQ9NRX6 74 aa4.99□□□□□ -1.61
PTCHD3P1-201ENST00000612350 LINC00588Q9Y4M8 146 aa4.99□□□□□ -1.61
PTCHD3P1-201ENST00000612350 KNCNA6PVL3 124 aa4.98□□□□□ -1.61
PTCHD3P1-201ENST00000612350 SLC17A3O00476 420 aa4.98□□□□□ -1.61
PTCHD3P1-201ENST00000612350 NDUFB4O95168 129 aa4.98□□□□□ -1.61
PTCHD3P1-201ENST00000612350 OR10J4P0C629 311 aa4.98□□□□□ -1.61
PTCHD3P1-201ENST00000612350 CSN1S1P47710 185 aa4.98□□□□□ -1.61
PTCHD3P1-201ENST00000612350 Q6ZRN7 208 aaPredicted RBP4.98□□□□□ -1.61
PTCHD3P1-201ENST00000612350 C9orf62Q8N4C0 152 aa4.98□□□□□ -1.61
PTCHD3P1-201ENST00000612350 RNF182Q8N6D2 247 aa4.98□□□□□ -1.61
PTCHD3P1-201ENST00000612350 OR8A1Q8NGG7 326 aa4.98□□□□□ -1.61
PTCHD3P1-201ENST00000612350 OR10J6PQ8NGY7 276 aa4.98□□□□□ -1.61
PTCHD3P1-201ENST00000612350 BLNKQ8WV28 456 aa4.98□□□□□ -1.61
PTCHD3P1-201ENST00000612350 RPUSD4Q96CM3 377 aaKnown RBP4.98□□□□□ -1.61
PTCHD3P1-201ENST00000612350 PHYHIPLQ96FC7 376 aa4.98□□□□□ -1.61
PTCHD3P1-201ENST00000612350 C20orf173Q96LM9 149 aa4.98□□□□□ -1.61
PTCHD3P1-201ENST00000612350 NKX6-2Q9C056 277 aaPredicted RBP4.98□□□□□ -1.61
PTCHD3P1-201ENST00000612350 OTORQ9NRC9 128 aa4.98□□□□□ -1.61
PTCHD3P1-201ENST00000612350 RFNGQ9Y644 331 aa4.98□□□□□ -1.61
PTCHD3P1-201ENST00000612350 LRP2P98164 4655 aa4.97□□□□□ -1.61
PTCHD3P1-201ENST00000612350 SERTM2A0A1B0GWG4 89 aa4.97□□□□□ -1.61
PTCHD3P1-201ENST00000612350 RBAKDNA6NC62 111 aa4.97□□□□□ -1.61
PTCHD3P1-201ENST00000612350 TEX46H3BTG2 121 aa4.97□□□□□ -1.61
PTCHD3P1-201ENST00000612350 SLC25A5P05141 298 aaKnown RBP4.97□□□□□ -1.61
PTCHD3P1-201ENST00000612350 ARL14EPLP0DKL9 152 aa4.97□□□□□ -1.61
PTCHD3P1-201ENST00000612350 HTN3P15516 51 aa4.97□□□□□ -1.61
PTCHD3P1-201ENST00000612350 HOXA5P20719 270 aa4.97□□□□□ -1.61
PTCHD3P1-201ENST00000612350 GCHFRP30047 84 aa4.97□□□□□ -1.61
PTCHD3P1-201ENST00000612350 CNN1P51911 297 aaKnown RBP4.97□□□□□ -1.61
PTCHD3P1-201ENST00000612350 RANP62826 216 aaKnown RBP4.97□□□□□ -1.61
PTCHD3P1-201ENST00000612350 CD300CQ08708 224 aa4.97□□□□□ -1.61
PTCHD3P1-201ENST00000612350 NDUFA5Q16718 116 aa4.97□□□□□ -1.61
PTCHD3P1-201ENST00000612350 IGFL4Q6B9Z1 124 aa4.97□□□□□ -1.61
PTCHD3P1-201ENST00000612350 OR4B1Q8NGF8 309 aa4.97□□□□□ -1.61
PTCHD3P1-201ENST00000612350 MBD3L1Q8WWY6 194 aa4.97□□□□□ -1.61
PTCHD3P1-201ENST00000612350 LINC00477Q96M19 166 aa4.97□□□□□ -1.61
PTCHD3P1-201ENST00000612350 ODF3Q96PU9 254 aa4.97□□□□□ -1.61
PTCHD3P1-201ENST00000612350 NIPSNAP3BQ9BS92 247 aa4.97□□□□□ -1.61
PTCHD3P1-201ENST00000612350 Q9H3A6 140 aa4.97□□□□□ -1.61
PTCHD3P1-201ENST00000612350 Q9H8V8 135 aa4.97□□□□□ -1.61
PTCHD3P1-201ENST00000612350 DKK2Q9UBU2 259 aa4.97□□□□□ -1.61
PTCHD3P1-201ENST00000612350 ARL2-SNX15V9GYD0 113 aa4.97□□□□□ -1.61
PTCHD3P1-201ENST00000612350 TRBV7-9A0A0J9YWB2 115 aa4.96□□□□□ -1.62
PTCHD3P1-201ENST00000612350 A0A1W2PRE2 83 aa4.96□□□□□ -1.62
PTCHD3P1-201ENST00000612350 MAP1LC3B2A6NCE7 125 aa4.96□□□□□ -1.62
PTCHD3P1-201ENST00000612350 H3BTX0 84 aa4.96□□□□□ -1.62
PTCHD3P1-201ENST00000612350 PLA2G1BP04054 148 aaKnown RBP4.96□□□□□ -1.62
PTCHD3P1-201ENST00000612350 NMBP08949 121 aa4.96□□□□□ -1.62
PTCHD3P1-201ENST00000612350 SNRPCP09234 159 aaKnown RBP4.96□□□□□ -1.62
PTCHD3P1-201ENST00000612350 PRB4P10163 310 aaPredicted RBP4.96□□□□□ -1.62
PTCHD3P1-201ENST00000612350 TSPOP30536 169 aa4.96□□□□□ -1.62
PTCHD3P1-201ENST00000612350 SULT1A2P50226 295 aa4.96□□□□□ -1.62
PTCHD3P1-201ENST00000612350 PPT1P50897 306 aa4.96□□□□□ -1.62
PTCHD3P1-201ENST00000612350 NKX2-5P52952 324 aaPredicted RBP4.96□□□□□ -1.62
PTCHD3P1-201ENST00000612350 EMP1P54849 157 aa4.96□□□□□ -1.62
PTCHD3P1-201ENST00000612350 CCL18P55774 89 aa4.96□□□□□ -1.62
PTCHD3P1-201ENST00000612350 HIST1H1AQ02539 215 aaPredicted RBP4.96□□□□□ -1.62
PTCHD3P1-201ENST00000612350 ZNF726P1Q15940 193 aa4.96□□□□□ -1.62
PTCHD3P1-201ENST00000612350 GDF5OSQ5U4N7 250 aa4.96□□□□□ -1.62
PTCHD3P1-201ENST00000612350 FAM222AQ5U5X8 452 aa4.96□□□□□ -1.62
PTCHD3P1-201ENST00000612350 C9orf47Q6ZRZ4 202 aa4.96□□□□□ -1.62
PTCHD3P1-201ENST00000612350 EXOC3-AS1Q8N2X6 119 aa4.96□□□□□ -1.62
PTCHD3P1-201ENST00000612350 CMTM2Q8TAZ6 248 aa4.96□□□□□ -1.62
PTCHD3P1-201ENST00000612350 TMED6Q8WW62 240 aa4.96□□□□□ -1.62
PTCHD3P1-201ENST00000612350 NEU1Q99519 415 aa4.96□□□□□ -1.62
PTCHD3P1-201ENST00000612350 TCEAL7Q9BRU2 100 aa4.96□□□□□ -1.62
PTCHD3P1-201ENST00000612350 MAP1LC3BQ9GZQ8 125 aa4.96□□□□□ -1.62
PTCHD3P1-201ENST00000612350 PPP1R14DQ9NXH3 145 aa4.96□□□□□ -1.62
PTCHD3P1-201ENST00000612350 TRAV1-1A0A0B4J248 108 aa4.95□□□□□ -1.62
PTCHD3P1-201ENST00000612350 PGPA6NDG6 321 aa4.95□□□□□ -1.62
PTCHD3P1-201ENST00000612350 SMIM9A6NGZ8 99 aa4.95□□□□□ -1.62
PTCHD3P1-201ENST00000612350 FBLL1A6NHQ2 334 aaKnown RBP4.95□□□□□ -1.62
PTCHD3P1-201ENST00000612350 ZNF705FA8MVS1 300 aaPredicted RBP4.95□□□□□ -1.62
PTCHD3P1-201ENST00000612350 DIRC3C9JPN6 131 aa4.95□□□□□ -1.62
PTCHD3P1-201ENST00000612350 F6UB75 175 aa4.95□□□□□ -1.62
PTCHD3P1-201ENST00000612350 K7EQM0 130 aa4.95□□□□□ -1.62
PTCHD3P1-201ENST00000612350 HMGB3O15347 200 aaKnown RBP4.95□□□□□ -1.62
PTCHD3P1-201ENST00000612350 HBE1P02100 147 aa4.95□□□□□ -1.62
PTCHD3P1-201ENST00000612350 ASIPP42127 132 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms