RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 SMPXQ9UHP9 88 aa6.78□□□□□ -1.32
LIG4-204ENST00000611712 TMEM238LA0A1B0GVL6 79 aa6.77□□□□□ -1.33
LIG4-204ENST00000611712 A6NJY4 79 aa6.77□□□□□ -1.33
LIG4-204ENST00000611712 FAM223BA6NKX1 122 aa6.77□□□□□ -1.33
LIG4-204ENST00000611712 VWC2LB2RUY7 222 aa6.77□□□□□ -1.33
LIG4-204ENST00000611712 KIR3DS1Q14943 382 aa6.77□□□□□ -1.33
LIG4-204ENST00000611712 TMEM170BQ5T4T1 132 aa6.77□□□□□ -1.33
LIG4-204ENST00000611712 DTX2Q86UW9 622 aa6.77□□□□□ -1.33
LIG4-204ENST00000611712 FAM223AQ8IWN6 122 aa6.77□□□□□ -1.33
LIG4-204ENST00000611712 TRAV26-2A0A0B4J265 109 aa6.77□□□□□ -1.33
LIG4-204ENST00000611712 TNFRSF13BO14836 293 aaPredicted RBP6.77□□□□□ -1.33
LIG4-204ENST00000611712 TGFAP01135 160 aa6.77□□□□□ -1.33
LIG4-204ENST00000611712 LY6G5BQ8NDX9 201 aa6.77□□□□□ -1.33
LIG4-204ENST00000611712 RHPN1-AS1Q9BWJ2 59 aa6.77□□□□□ -1.33
LIG4-204ENST00000611712 LINC01559Q495D7 138 aa6.77□□□□□ -1.33
LIG4-204ENST00000611712 ZNF256Q9Y2P7 627 aaPredicted RBP6.77□□□□□ -1.33
LIG4-204ENST00000611712 WDFY4Q6ZS81 3184 aa6.77□□□□□ -1.33
LIG4-204ENST00000611712 FCN3O75636 299 aa6.76□□□□□ -1.33
LIG4-204ENST00000611712 CTRLP40313 264 aa6.76□□□□□ -1.33
LIG4-204ENST00000611712 LYRM7Q5U5X0 104 aa6.76□□□□□ -1.33
LIG4-204ENST00000611712 LINC01545Q5VT33 79 aa6.76□□□□□ -1.33
LIG4-204ENST00000611712 DGAT2L7PQ6IED9 249 aa6.76□□□□□ -1.33
LIG4-204ENST00000611712 DYNLRB2Q8TF09 96 aa6.76□□□□□ -1.33
LIG4-204ENST00000611712 CFHR4Q92496 578 aa6.76□□□□□ -1.33
LIG4-204ENST00000611712 IGHV1-69DA0A0B4J2H0 117 aa6.76□□□□□ -1.33
LIG4-204ENST00000611712 TRBV6-1A0A0K0K1D8 114 aa6.76□□□□□ -1.33
LIG4-204ENST00000611712 PRAC2D3DTV9 90 aa6.76□□□□□ -1.33
LIG4-204ENST00000611712 LY6LH3BQJ8 138 aa6.76□□□□□ -1.33
LIG4-204ENST00000611712 OVOL3O00110 214 aa6.76□□□□□ -1.33
LIG4-204ENST00000611712 IGHV1-69P01742 117 aa6.76□□□□□ -1.33
LIG4-204ENST00000611712 GATA1P15976 413 aaPredicted RBP6.76□□□□□ -1.33
LIG4-204ENST00000611712 PSMB2P49721 201 aa6.76□□□□□ -1.33
LIG4-204ENST00000611712 DKK2Q9UBU2 259 aa6.76□□□□□ -1.33
LIG4-204ENST00000611712 CHTOPQ9Y3Y2 248 aaKnown RBP6.76□□□□□ -1.33
LIG4-204ENST00000611712 CENPVL3A0A0U1RRI6 287 aa6.76□□□□□ -1.33
LIG4-204ENST00000611712 BUB3O43684 328 aa6.76□□□□□ -1.33
LIG4-204ENST00000611712 USMG5Q96IX5 58 aa6.76□□□□□ -1.33
LIG4-204ENST00000611712 DPH3P1Q9H4G8 78 aa6.76□□□□□ -1.33
LIG4-204ENST00000611712 PIEZO1Q92508 2521 aa6.76□□□□□ -1.33
LIG4-204ENST00000611712 GAGE12BA1L429 117 aa6.76□□□□□ -1.33
LIG4-204ENST00000611712 TMEM8BA6NDV4 472 aa6.76□□□□□ -1.33
LIG4-204ENST00000611712 CCL25O15444 150 aa6.76□□□□□ -1.33
LIG4-204ENST00000611712 ZNF688P0C7X2 276 aa6.76□□□□□ -1.33
LIG4-204ENST00000611712 NPIPB6E9PJ23 425 aa6.75□□□□□ -1.33
LIG4-204ENST00000611712 ANKRD39Q53RE8 183 aa6.75□□□□□ -1.33
LIG4-204ENST00000611712 SAMD5Q5TGI4 173 aa6.75□□□□□ -1.33
LIG4-204ENST00000611712 Q8N8P6 123 aa6.75□□□□□ -1.33
LIG4-204ENST00000611712 JMJD8Q96S16 334 aa6.75□□□□□ -1.33
LIG4-204ENST00000611712 TP73-AS1Q9UF72 201 aa6.75□□□□□ -1.33
LIG4-204ENST00000611712 CYSLTR1Q9Y271 337 aa6.75□□□□□ -1.33
LIG4-204ENST00000611712 IGLV2-11P01706 119 aa6.75□□□□□ -1.33
LIG4-204ENST00000611712 FOXE3Q13461 319 aa6.75□□□□□ -1.33
LIG4-204ENST00000611712 CELSR3Q9NYQ7 3312 aa6.75□□□□□ -1.33
LIG4-204ENST00000611712 COX6B1P14854 86 aa6.75□□□□□ -1.33
LIG4-204ENST00000611712 LCNL1Q6ZST4 164 aa6.75□□□□□ -1.33
LIG4-204ENST00000611712 SPTBN4Q9H254 2564 aa6.74□□□□□ -1.33
LIG4-204ENST00000611712 CHD8Q9HCK8 2581 aa6.74□□□□□ -1.33
LIG4-204ENST00000611712 ODF3BA8MYP8 253 aa6.74□□□□□ -1.33
LIG4-204ENST00000611712 LGALS3P17931 250 aaKnown RBP6.74□□□□□ -1.33
LIG4-204ENST00000611712 CRIP1P50238 77 aa6.74□□□□□ -1.33
LIG4-204ENST00000611712 PAX2Q02962 417 aa6.74□□□□□ -1.33
LIG4-204ENST00000611712 LOXL1Q08397 574 aaPredicted RBP6.74□□□□□ -1.33
LIG4-204ENST00000611712 SCRT2Q9NQ03 307 aa6.74□□□□□ -1.33
LIG4-204ENST00000611712 TRAV12-3A0A0B4J271 114 aa6.74□□□□□ -1.33
LIG4-204ENST00000611712 SPRY2O43597 315 aa6.74□□□□□ -1.33
LIG4-204ENST00000611712 DUX5Q96PT3 197 aa6.74□□□□□ -1.33
LIG4-204ENST00000611712 CHAC1Q9BUX1 264 aa6.74□□□□□ -1.33
LIG4-204ENST00000611712 MRPL16Q9NX20 251 aaKnown RBP6.74□□□□□ -1.33
LIG4-204ENST00000611712 H7C2G1 150 aa6.74□□□□□ -1.33
LIG4-204ENST00000611712 ZNF80P51504 273 aaPredicted RBP6.74□□□□□ -1.33
LIG4-204ENST00000611712 CD300EQ496F6 205 aaPredicted RBP6.74□□□□□ -1.33
LIG4-204ENST00000611712 DEFB125Q8N687 156 aa6.74□□□□□ -1.33
LIG4-204ENST00000611712 ZNF48Q96MX3 618 aaPredicted RBP6.74□□□□□ -1.33
LIG4-204ENST00000611712 DAZ1Q9NQZ3 744 aaKnown RBP6.74□□□□□ -1.33
LIG4-204ENST00000611712 H7C1H1 209 aa6.73□□□□□ -1.33
LIG4-204ENST00000611712 APOMO95445 188 aa6.73□□□□□ -1.33
LIG4-204ENST00000611712 PLNP26678 52 aa6.73□□□□□ -1.33
LIG4-204ENST00000611712 SFTA2Q6UW10 78 aa6.73□□□□□ -1.33
LIG4-204ENST00000611712 PCP2Q8IVA1 136 aa6.73□□□□□ -1.33
LIG4-204ENST00000611712 Q8N976 141 aa6.73□□□□□ -1.33
LIG4-204ENST00000611712 CSTL1Q9H114 145 aa6.73□□□□□ -1.33
LIG4-204ENST00000611712 ZNF815PA8K554 130 aa6.73□□□□□ -1.33
LIG4-204ENST00000611712 B4DSR2 109 aa6.73□□□□□ -1.33
LIG4-204ENST00000611712 SAMD13Q5VXD3 122 aa6.73□□□□□ -1.33
LIG4-204ENST00000611712 SIRPDQ9H106 197 aa6.73□□□□□ -1.33
LIG4-204ENST00000611712 MEGF9Q9H1U4 602 aa6.73□□□□□ -1.33
LIG4-204ENST00000611712 MRPL35Q9NZE8 188 aaKnown RBP6.73□□□□□ -1.33
LIG4-204ENST00000611712 FSTL3O95633 263 aa6.73□□□□□ -1.33
LIG4-204ENST00000611712 SUMO2P61956 95 aaKnown RBP6.73□□□□□ -1.33
LIG4-204ENST00000611712 ANXA2RQ3ZCQ2 193 aa6.73□□□□□ -1.33
LIG4-204ENST00000611712 ARL6IP6Q8N6S5 226 aa6.73□□□□□ -1.33
LIG4-204ENST00000611712 OR5A1Q8NGJ0 315 aa6.73□□□□□ -1.33
LIG4-204ENST00000611712 NDUFA4O00483 81 aa6.72□□□□□ -1.33
LIG4-204ENST00000611712 PRSS2P07478 247 aa6.72□□□□□ -1.33
LIG4-204ENST00000611712 MRAP2Q96G30 205 aa6.72□□□□□ -1.33
LIG4-204ENST00000611712 ZNF479Q96JC4 524 aa6.72□□□□□ -1.33
LIG4-204ENST00000611712 CST9LQ9H4G1 147 aa6.72□□□□□ -1.33
LIG4-204ENST00000611712 IGHV3OR16-12A0A075B7B8 117 aa6.72□□□□□ -1.33
LIG4-204ENST00000611712 A0A087WWL8 130 aa6.72□□□□□ -1.33
LIG4-204ENST00000611712 RBAKDNA6NC62 111 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms