RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 MRPL35Q9NZE8 188 aaKnown RBP11.67□□□□□ -0.54
PCDHGB1-202ENST00000611598 MED13LQ71F56 2210 aa11.67□□□□□ -0.54
PCDHGB1-202ENST00000611598 SMIM17P0DL12 118 aa11.67□□□□□ -0.54
PCDHGB1-202ENST00000611598 CEND1Q8N111 149 aa11.66□□□□□ -0.54
PCDHGB1-202ENST00000611598 Q8N8P6 123 aa11.66□□□□□ -0.54
PCDHGB1-202ENST00000611598 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.65□□□□□ -0.55
PCDHGB1-202ENST00000611598 TLN1Q9Y490 2541 aaKnown RBP11.64□□□□□ -0.55
PCDHGB1-202ENST00000611598 AGRNO00468 2067 aa11.64□□□□□ -0.55
PCDHGB1-202ENST00000611598 IGHV3-49A0A0A0MS15 119 aa11.64□□□□□ -0.55
PCDHGB1-202ENST00000611598 IGHV7-81A0A0B4J1V7 117 aa11.64□□□□□ -0.55
PCDHGB1-202ENST00000611598 ZNF207O43670 478 aaKnown RBP11.64□□□□□ -0.55
PCDHGB1-202ENST00000611598 ATP5LO75964 103 aa11.64□□□□□ -0.55
PCDHGB1-202ENST00000611598 EFNA4P52798 201 aa11.64□□□□□ -0.55
PCDHGB1-202ENST00000611598 NRACQ8N912 160 aa11.64□□□□□ -0.55
PCDHGB1-202ENST00000611598 TM2D2Q9BX73 214 aa11.64□□□□□ -0.55
PCDHGB1-202ENST00000611598 AGPAT4-IT1Q9H0P7 198 aa11.64□□□□□ -0.55
PCDHGB1-202ENST00000611598 UFC1Q9Y3C8 167 aa11.64□□□□□ -0.55
PCDHGB1-202ENST00000611598 GOSR1O95249 250 aa11.64□□□□□ -0.55
PCDHGB1-202ENST00000611598 Q8N6K4 173 aa11.64□□□□□ -0.55
PCDHGB1-202ENST00000611598 ZFAND3Q9H8U3 227 aa11.64□□□□□ -0.55
PCDHGB1-202ENST00000611598 HRNRQ86YZ3 2850 aaPredicted RBP11.63□□□□□ -0.55
PCDHGB1-202ENST00000611598 BUB3O43684 328 aa11.63□□□□□ -0.55
PCDHGB1-202ENST00000611598 PRTN3P24158 256 aa11.63□□□□□ -0.55
PCDHGB1-202ENST00000611598 C15orf32Q32M92 178 aa11.63□□□□□ -0.55
PCDHGB1-202ENST00000611598 VMO1Q7Z5L0 202 aa11.63□□□□□ -0.55
PCDHGB1-202ENST00000611598 IGHV7-4-1A0A0J9YVY3 117 aa11.63□□□□□ -0.55
PCDHGB1-202ENST00000611598 FAM90A27PA6NNH2 459 aa11.63□□□□□ -0.55
PCDHGB1-202ENST00000611598 WFDC2Q14508 124 aa11.62□□□□□ -0.55
PCDHGB1-202ENST00000611598 SMPXQ9UHP9 88 aa11.62□□□□□ -0.55
PCDHGB1-202ENST00000611598 ZFHX3Q15911 3703 aa11.62□□□□□ -0.55
PCDHGB1-202ENST00000611598 IGLL5B9A064 214 aa11.62□□□□□ -0.55
PCDHGB1-202ENST00000611598 E9PLD3 99 aa11.62□□□□□ -0.55
PCDHGB1-202ENST00000611598 CLEC3BP05452 202 aa11.62□□□□□ -0.55
PCDHGB1-202ENST00000611598 TMEM11P17152 192 aa11.62□□□□□ -0.55
PCDHGB1-202ENST00000611598 PTPRZ1P23471 2315 aaPredicted RBP11.62□□□□□ -0.55
PCDHGB1-202ENST00000611598 LAGE3Q14657 143 aa11.62□□□□□ -0.55
PCDHGB1-202ENST00000611598 ECSCRQ19T08 205 aa11.62□□□□□ -0.55
PCDHGB1-202ENST00000611598 PSMG4Q5JS54 123 aa11.62□□□□□ -0.55
PCDHGB1-202ENST00000611598 CLPSL1A2RUU4 121 aa11.61□□□□□ -0.55
PCDHGB1-202ENST00000611598 M0R1W7 72 aa11.61□□□□□ -0.55
PCDHGB1-202ENST00000611598 ZNF502Q8TBZ5 544 aa11.61□□□□□ -0.55
PCDHGB1-202ENST00000611598 MTURNQ8N3F0 131 aa11.61□□□□□ -0.55
PCDHGB1-202ENST00000611598 MYOZ3Q8TDC0 251 aa11.61□□□□□ -0.55
PCDHGB1-202ENST00000611598 TRAV8-2A0A0B4J237 113 aa11.6□□□□□ -0.55
PCDHGB1-202ENST00000611598 SPRY2O43597 315 aa11.6□□□□□ -0.55
PCDHGB1-202ENST00000611598 SCGB2A1O75556 95 aa11.6□□□□□ -0.55
PCDHGB1-202ENST00000611598 AMTNQ6UX39 209 aa11.6□□□□□ -0.55
PCDHGB1-202ENST00000611598 Q8N9W7 124 aa11.6□□□□□ -0.55
PCDHGB1-202ENST00000611598 GTSF1LQ9H1H1 148 aa11.6□□□□□ -0.55
PCDHGB1-202ENST00000611598 A0A087WX48 190 aa11.6□□□□□ -0.55
PCDHGB1-202ENST00000611598 RBAKDNA6NC62 111 aa11.6□□□□□ -0.55
PCDHGB1-202ENST00000611598 H3BMG7 143 aa11.6□□□□□ -0.55
PCDHGB1-202ENST00000611598 ZNF479Q96JC4 524 aa11.6□□□□□ -0.55
PCDHGB1-202ENST00000611598 C12orf74Q32Q52 190 aa11.59□□□□□ -0.55
PCDHGB1-202ENST00000611598 MSRB2Q9Y3D2 182 aa11.59□□□□□ -0.55
PCDHGB1-202ENST00000611598 NBASA2RRP1 2371 aa11.59□□□□□ -0.55
PCDHGB1-202ENST00000611598 HLA-DRB4P13762 266 aa11.59□□□□□ -0.55
PCDHGB1-202ENST00000611598 SAMD13Q5VXD3 122 aa11.59□□□□□ -0.55
PCDHGB1-202ENST00000611598 CCDC144NLQ6NUI1 221 aa11.59□□□□□ -0.55
PCDHGB1-202ENST00000611598 CLEC19AQ6UXS0 136 aa11.59□□□□□ -0.55
PCDHGB1-202ENST00000611598 FOXI2Q6ZQN5 318 aa11.59□□□□□ -0.55
PCDHGB1-202ENST00000611598 SH2D6Q7Z4S9 175 aa11.59□□□□□ -0.55
PCDHGB1-202ENST00000611598 CCDC140Q96MF4 163 aa11.59□□□□□ -0.55
PCDHGB1-202ENST00000611598 KLK15Q9H2R5 256 aa11.59□□□□□ -0.55
PCDHGB1-202ENST00000611598 SPANXB1Q9NS25 103 aaPredicted RBP11.59□□□□□ -0.55
PCDHGB1-202ENST00000611598 HLA-DRB4X5D2U9 266 aa11.59□□□□□ -0.55
PCDHGB1-202ENST00000611598 SRSF1Q07955 248 aaKnown RBP eCLIP11.58□□□□□ -0.56
PCDHGB1-202ENST00000611598 SPANXN1Q5VSR9 72 aa11.58□□□□□ -0.56
PCDHGB1-202ENST00000611598 TIMD4Q96H15 378 aa11.58□□□□□ -0.56
PCDHGB1-202ENST00000611598 HIST1H4GQ99525 98 aa11.58□□□□□ -0.56
PCDHGB1-202ENST00000611598 SLC50A1Q9BRV3 221 aa11.58□□□□□ -0.56
PCDHGB1-202ENST00000611598 H3BVH4 76 aa11.58□□□□□ -0.56
PCDHGB1-202ENST00000611598 EBI3Q14213 229 aa11.58□□□□□ -0.56
PCDHGB1-202ENST00000611598 TMEM78Q5T7P6 136 aa11.58□□□□□ -0.56
PCDHGB1-202ENST00000611598 SPTA1P02549 2419 aa11.57□□□□□ -0.56
PCDHGB1-202ENST00000611598 G3V318 75 aa11.57□□□□□ -0.56
PCDHGB1-202ENST00000611598 ATP6V0E1O15342 81 aa11.57□□□□□ -0.56
PCDHGB1-202ENST00000611598 AZU1P20160 251 aa11.57□□□□□ -0.56
PCDHGB1-202ENST00000611598 CDSNQ15517 529 aa11.57□□□□□ -0.56
PCDHGB1-202ENST00000611598 PRR9Q5T870 116 aa11.57□□□□□ -0.56
PCDHGB1-202ENST00000611598 VKORC1Q9BQB6 163 aa11.57□□□□□ -0.56
PCDHGB1-202ENST00000611598 TSSC4Q9Y5U2 329 aaPredicted RBP11.57□□□□□ -0.56
PCDHGB1-202ENST00000611598 LINC01548A6NM66 108 aa11.57□□□□□ -0.56
PCDHGB1-202ENST00000611598 PRSS47A8MTI9 375 aa11.57□□□□□ -0.56
PCDHGB1-202ENST00000611598 J3KRW8 73 aa11.57□□□□□ -0.56
PCDHGB1-202ENST00000611598 IGF1P05019 195 aa11.57□□□□□ -0.56
PCDHGB1-202ENST00000611598 ZFP36P26651 326 aaKnown RBP11.57□□□□□ -0.56
PCDHGB1-202ENST00000611598 LCNL1Q6ZST4 164 aa11.57□□□□□ -0.56
PCDHGB1-202ENST00000611598 C8orf86Q6ZUL3 223 aa11.57□□□□□ -0.56
PCDHGB1-202ENST00000611598 SMAGPQ0VAQ4 97 aa11.56□□□□□ -0.56
PCDHGB1-202ENST00000611598 ETDBQ3ZM63 59 aa11.56□□□□□ -0.56
PCDHGB1-202ENST00000611598 FAM110DQ8TAY7 271 aaPredicted RBP11.56□□□□□ -0.56
PCDHGB1-202ENST00000611598 TRBV7-3A0A075B6L6 115 aa11.55□□□□□ -0.56
PCDHGB1-202ENST00000611598 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.55□□□□□ -0.56
PCDHGB1-202ENST00000611598 PLNP26678 52 aa11.55□□□□□ -0.56
PCDHGB1-202ENST00000611598 CEP295Q9C0D2 2601 aa11.55□□□□□ -0.56
PCDHGB1-202ENST00000611598 F8W1H4 67 aa11.55□□□□□ -0.56
PCDHGB1-202ENST00000611598 SMIM2Q9BVW6 85 aa11.55□□□□□ -0.56
PCDHGB1-202ENST00000611598 F8VRH5 84 aa11.54□□□□□ -0.56
PCDHGB1-202ENST00000611598 RAB9AP51151 201 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms