RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 DEFB130AP0DP74 79 aa11.26□□□□□ -0.61
PCDHB16-201ENST00000609684 ESDP10768 282 aa11.26□□□□□ -0.61
PCDHB16-201ENST00000609684 HLA-DMBP28068 263 aa11.26□□□□□ -0.61
PCDHB16-201ENST00000609684 LY6G5BQ8NDX9 201 aa11.25□□□□□ -0.61
PCDHB16-201ENST00000609684 OR11H6Q8NGC7 330 aa11.25□□□□□ -0.61
PCDHB16-201ENST00000609684 EML6Q6ZMW3 1958 aa11.25□□□□□ -0.61
PCDHB16-201ENST00000609684 A0A1B0GV72 72 aa11.25□□□□□ -0.61
PCDHB16-201ENST00000609684 CKS1BP61024 79 aa11.25□□□□□ -0.61
PCDHB16-201ENST00000609684 TIMM21Q9BVV7 248 aa11.25□□□□□ -0.61
PCDHB16-201ENST00000609684 CACNA1AO00555 2505 aa11.25□□□□□ -0.61
PCDHB16-201ENST00000609684 IGHV1OR15-1A0A075B7D0 117 aa11.25□□□□□ -0.61
PCDHB16-201ENST00000609684 OBSL1O75147 1896 aa11.24□□□□□ -0.61
PCDHB16-201ENST00000609684 ZNF106Q9H2Y7 1883 aaKnown RBP11.24□□□□□ -0.61
PCDHB16-201ENST00000609684 NPYP01303 97 aa11.24□□□□□ -0.61
PCDHB16-201ENST00000609684 SIGLEC8Q9NYZ4 499 aa11.24□□□□□ -0.61
PCDHB16-201ENST00000609684 CD5LO43866 347 aa11.24□□□□□ -0.61
PCDHB16-201ENST00000609684 RNF114Q9Y508 228 aa11.24□□□□□ -0.61
PCDHB16-201ENST00000609684 PCDH15Q96QU1 1955 aa11.24□□□□□ -0.61
PCDHB16-201ENST00000609684 J3QLI3 93 aa11.24□□□□□ -0.61
PCDHB16-201ENST00000609684 RITA1Q96K30 269 aa11.24□□□□□ -0.61
PCDHB16-201ENST00000609684 SLC25A20O43772 301 aa11.24□□□□□ -0.61
PCDHB16-201ENST00000609684 IGLC2P0DOY2 106 aa11.24□□□□□ -0.61
PCDHB16-201ENST00000609684 IGLC3P0DOY3 106 aa11.24□□□□□ -0.61
PCDHB16-201ENST00000609684 CDKN1BP46527 198 aa11.24□□□□□ -0.61
PCDHB16-201ENST00000609684 SNHG12Q9BXW3 62 aa11.24□□□□□ -0.61
PCDHB16-201ENST00000609684 IGHV7-4-1A0A0J9YVY3 117 aa11.23□□□□□ -0.61
PCDHB16-201ENST00000609684 SDHAF1A6NFY7 115 aa11.23□□□□□ -0.61
PCDHB16-201ENST00000609684 IGHV3-16A0A0C4DH30 117 aa11.23□□□□□ -0.61
PCDHB16-201ENST00000609684 RHODO00212 210 aa11.23□□□□□ -0.61
PCDHB16-201ENST00000609684 PAX4O43316 350 aa11.23□□□□□ -0.61
PCDHB16-201ENST00000609684 UBE2V1Q13404 147 aa11.23□□□□□ -0.61
PCDHB16-201ENST00000609684 PGPEP1Q9NXJ5 209 aa11.23□□□□□ -0.61
PCDHB16-201ENST00000609684 ATXN8Q156A1 80 aa11.22□□□□□ -0.61
PCDHB16-201ENST00000609684 MSMPQ1L6U9 139 aa11.22□□□□□ -0.61
PCDHB16-201ENST00000609684 DYNAPQ8N1N2 210 aa11.22□□□□□ -0.61
PCDHB16-201ENST00000609684 ADAMTS9Q9P2N4 1935 aa11.22□□□□□ -0.61
PCDHB16-201ENST00000609684 IGLV2-14P01704 120 aa11.21□□□□□ -0.61
PCDHB16-201ENST00000609684 IGLL1P15814 213 aa11.21□□□□□ -0.61
PCDHB16-201ENST00000609684 MORN5Q5VZ52 161 aa11.21□□□□□ -0.61
PCDHB16-201ENST00000609684 NEGR1Q7Z3B1 354 aa11.21□□□□□ -0.61
PCDHB16-201ENST00000609684 CENPVL3A0A0U1RRI6 287 aa11.21□□□□□ -0.61
PCDHB16-201ENST00000609684 PRIMA1Q86XR5 153 aa11.21□□□□□ -0.61
PCDHB16-201ENST00000609684 MYMXA0A1B0GTQ4 84 aa11.21□□□□□ -0.61
PCDHB16-201ENST00000609684 C6orf226Q5I0X4 101 aa11.21□□□□□ -0.62
PCDHB16-201ENST00000609684 S100A7L2Q5SY68 101 aa11.21□□□□□ -0.62
PCDHB16-201ENST00000609684 AGPAT4-IT1Q9H0P7 198 aa11.21□□□□□ -0.62
PCDHB16-201ENST00000609684 K7EIM0 57 aa11.2□□□□□ -0.62
PCDHB16-201ENST00000609684 IGKV1-17P01599 117 aa11.2□□□□□ -0.62
PCDHB16-201ENST00000609684 COX11Q9Y6N1 276 aa11.2□□□□□ -0.62
PCDHB16-201ENST00000609684 IGHV4-61A0A0C4DH41 118 aa11.2□□□□□ -0.62
PCDHB16-201ENST00000609684 GAGE12JA6NER3 117 aa11.2□□□□□ -0.62
PCDHB16-201ENST00000609684 F6UB75 175 aa11.2□□□□□ -0.62
PCDHB16-201ENST00000609684 I3L2K1 104 aa11.2□□□□□ -0.62
PCDHB16-201ENST00000609684 CFHR3Q02985 330 aa11.2□□□□□ -0.62
PCDHB16-201ENST00000609684 GAGE1Q13065 139 aa11.2□□□□□ -0.62
PCDHB16-201ENST00000609684 GAGE4Q13068 117 aa11.2□□□□□ -0.62
PCDHB16-201ENST00000609684 GAGE5Q13069 117 aa11.2□□□□□ -0.62
PCDHB16-201ENST00000609684 IGHV4-59P01825 116 aa11.2□□□□□ -0.62
PCDHB16-201ENST00000609684 DEFB112Q30KQ8 113 aa11.2□□□□□ -0.62
PCDHB16-201ENST00000609684 PATE2Q6UY27 113 aa11.2□□□□□ -0.62
PCDHB16-201ENST00000609684 DLX4Q92988 240 aaPredicted RBP11.2□□□□□ -0.62
PCDHB16-201ENST00000609684 DENND4AQ7Z401 1863 aa11.2□□□□□ -0.62
PCDHB16-201ENST00000609684 IGHV7-81A0A0B4J1V7 117 aa11.2□□□□□ -0.62
PCDHB16-201ENST00000609684 SMIM2Q9BVW6 85 aa11.2□□□□□ -0.62
PCDHB16-201ENST00000609684 I3L3M4 83 aa11.19□□□□□ -0.62
PCDHB16-201ENST00000609684 ELANEP08246 267 aa11.19□□□□□ -0.62
PCDHB16-201ENST00000609684 EGR2P11161 476 aaPredicted RBP11.19□□□□□ -0.62
PCDHB16-201ENST00000609684 DYSFO75923 2080 aa11.19□□□□□ -0.62
PCDHB16-201ENST00000609684 KIAA1549LQ6ZVL6 1849 aa11.19□□□□□ -0.62
PCDHB16-201ENST00000609684 TRAV8-4A0A0B4J246 113 aa11.19□□□□□ -0.62
PCDHB16-201ENST00000609684 GP9P14770 177 aa11.19□□□□□ -0.62
PCDHB16-201ENST00000609684 PMVKQ15126 192 aa11.19□□□□□ -0.62
PCDHB16-201ENST00000609684 GATD1Q8NB37 220 aa11.19□□□□□ -0.62
PCDHB16-201ENST00000609684 LGALS9BQ3B8N2 356 aa11.19□□□□□ -0.62
PCDHB16-201ENST00000609684 LGALS9CQ6DKI2 356 aa11.19□□□□□ -0.62
PCDHB16-201ENST00000609684 TMEM141Q96I45 108 aa11.19□□□□□ -0.62
PCDHB16-201ENST00000609684 SIGMAR1Q99720 223 aa11.19□□□□□ -0.62
PCDHB16-201ENST00000609684 H3BUA1 57 aa11.18□□□□□ -0.62
PCDHB16-201ENST00000609684 ADORA2A-AS1P86434 159 aa11.18□□□□□ -0.62
PCDHB16-201ENST00000609684 NPBQ8NG41 125 aa11.18□□□□□ -0.62
PCDHB16-201ENST00000609684 JPT2Q9H910 190 aa11.18□□□□□ -0.62
PCDHB16-201ENST00000609684 CSPG4Q6UVK1 2322 aa11.18□□□□□ -0.62
PCDHB16-201ENST00000609684 GHRHP01286 108 aa11.18□□□□□ -0.62
PCDHB16-201ENST00000609684 ZNF625Q96I27 306 aaPredicted RBP11.18□□□□□ -0.62
PCDHB16-201ENST00000609684 PRR14LQ5THK1 2151 aa11.18□□□□□ -0.62
PCDHB16-201ENST00000609684 FOXE3Q13461 319 aa11.18□□□□□ -0.62
PCDHB16-201ENST00000609684 MRPL35Q9NZE8 188 aaKnown RBP11.18□□□□□ -0.62
PCDHB16-201ENST00000609684 PYGO2Q9BRQ0 406 aa11.18□□□□□ -0.62
PCDHB16-201ENST00000609684 IGLV11-55A0A075B6I3 123 aa11.17□□□□□ -0.62
PCDHB16-201ENST00000609684 GAGE12BA1L429 117 aa11.17□□□□□ -0.62
PCDHB16-201ENST00000609684 AZU1P20160 251 aa11.17□□□□□ -0.62
PCDHB16-201ENST00000609684 TMEM131Q92545 1883 aa11.17□□□□□ -0.62
PCDHB16-201ENST00000609684 ODF3L1Q8IXM7 274 aa11.17□□□□□ -0.62
PCDHB16-201ENST00000609684 WIPF2Q8TF74 440 aaPredicted RBP11.17□□□□□ -0.62
PCDHB16-201ENST00000609684 IGHV3-38A0A0C4DH36 116 aa11.16□□□□□ -0.62
PCDHB16-201ENST00000609684 IGHV4-38-2P0DP08 117 aa11.16□□□□□ -0.62
PCDHB16-201ENST00000609684 CFHR4Q92496 578 aa11.16□□□□□ -0.62
PCDHB16-201ENST00000609684 KMT2EQ8IZD2 1858 aa11.16□□□□□ -0.62
PCDHB16-201ENST00000609684 IGHV4-30-2A0A087WSY4 118 aa11.16□□□□□ -0.62
PCDHB16-201ENST00000609684 COX8AP10176 69 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms