RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 IGHV7-4-1A0A0J9YVY3 117 aa17.22■□□□□ 0.35
SHANK2-220ENST00000608988 RRN3P1Q2M238 152 aa17.22■□□□□ 0.35
SHANK2-220ENST00000608988 MAPKAPK5-AS1Q8N8E1 139 aa17.22■□□□□ 0.35
SHANK2-220ENST00000608988 Q8NA96 180 aa17.22■□□□□ 0.35
SHANK2-220ENST00000608988 AGPAT4-IT1Q9H0P7 198 aa17.22■□□□□ 0.35
SHANK2-220ENST00000608988 TRBV7-3A0A075B6L6 115 aa17.21■□□□□ 0.35
SHANK2-220ENST00000608988 IGHV7-81A0A0B4J1V7 117 aa17.21■□□□□ 0.35
SHANK2-220ENST00000608988 F8VRH5 84 aa17.21■□□□□ 0.35
SHANK2-220ENST00000608988 KLRD1Q13241 179 aa17.21■□□□□ 0.35
SHANK2-220ENST00000608988 ORMDL2Q53FV1 153 aa17.21■□□□□ 0.35
SHANK2-220ENST00000608988 C9orf47Q6ZRZ4 202 aa17.21■□□□□ 0.35
SHANK2-220ENST00000608988 VMO1Q7Z5L0 202 aa17.21■□□□□ 0.35
SHANK2-220ENST00000608988 HIST1H4GQ99525 98 aa17.21■□□□□ 0.35
SHANK2-220ENST00000608988 SPATA25Q9BR10 227 aa17.21■□□□□ 0.35
SHANK2-220ENST00000608988 ABCA1O95477 2261 aa17.21■□□□□ 0.35
SHANK2-220ENST00000608988 TRGV3P03979 118 aa17.2■□□□□ 0.34
SHANK2-220ENST00000608988 VKORC1Q9BQB6 163 aa17.2■□□□□ 0.34
SHANK2-220ENST00000608988 LENEPQ9Y5L5 61 aa17.2■□□□□ 0.34
SHANK2-220ENST00000608988 TMEM11P17152 192 aa17.2■□□□□ 0.34
SHANK2-220ENST00000608988 PPIFP30405 207 aaKnown RBP17.2■□□□□ 0.34
SHANK2-220ENST00000608988 C11orf21Q9P2W6 132 aa17.2■□□□□ 0.34
SHANK2-220ENST00000608988 GAGE12HA6NDE8 117 aa17.19■□□□□ 0.34
SHANK2-220ENST00000608988 AZU1P20160 251 aa17.19■□□□□ 0.34
SHANK2-220ENST00000608988 NBL1P41271 181 aa17.19■□□□□ 0.34
SHANK2-220ENST00000608988 SMIM2Q9BVW6 85 aa17.19■□□□□ 0.34
SHANK2-220ENST00000608988 NDUFS8O00217 210 aa17.18■□□□□ 0.34
SHANK2-220ENST00000608988 DMXL1Q9Y485 3027 aa17.18■□□□□ 0.34
SHANK2-220ENST00000608988 RIF1Q5UIP0 2472 aaKnown RBP17.18■□□□□ 0.34
SHANK2-220ENST00000608988 MYMXA0A1B0GTQ4 84 aa17.18■□□□□ 0.34
SHANK2-220ENST00000608988 OR11H12B2RN74 326 aa17.18■□□□□ 0.34
SHANK2-220ENST00000608988 GAGE13Q4V321 117 aa17.18■□□□□ 0.34
SHANK2-220ENST00000608988 OR11H1Q8NG94 326 aa17.18■□□□□ 0.34
SHANK2-220ENST00000608988 OR11H2Q8NH07 326 aa17.18■□□□□ 0.34
SHANK2-220ENST00000608988 C20orf78Q9BR46 151 aa17.18■□□□□ 0.34
SHANK2-220ENST00000608988 WFDC2Q14508 124 aa17.17■□□□□ 0.34
SHANK2-220ENST00000608988 C15orf32Q32M92 178 aa17.17■□□□□ 0.34
SHANK2-220ENST00000608988 FBXL19-AS1Q494R0 122 aa17.17■□□□□ 0.34
SHANK2-220ENST00000608988 SPANXN1Q5VSR9 72 aa17.17■□□□□ 0.34
SHANK2-220ENST00000608988 UFC1Q9Y3C8 167 aa17.17■□□□□ 0.34
SHANK2-220ENST00000608988 RNF182Q8N6D2 247 aa17.16■□□□□ 0.34
SHANK2-220ENST00000608988 Q8N9W7 124 aa17.16■□□□□ 0.34
SHANK2-220ENST00000608988 TOMM6Q96B49 74 aa17.16■□□□□ 0.34
SHANK2-220ENST00000608988 TRAV8-2A0A0B4J237 113 aa17.16■□□□□ 0.34
SHANK2-220ENST00000608988 ATP6V0BQ99437 205 aa17.16■□□□□ 0.34
SHANK2-220ENST00000608988 TSSC4Q9Y5U2 329 aaPredicted RBP17.16■□□□□ 0.34
SHANK2-220ENST00000608988 CLPSL1A2RUU4 121 aa17.15■□□□□ 0.34
SHANK2-220ENST00000608988 METTL26Q96S19 204 aa17.15■□□□□ 0.34
SHANK2-220ENST00000608988 PRO0461Q9UI25 63 aa17.15■□□□□ 0.34
SHANK2-220ENST00000608988 CENPVL3A0A0U1RRI6 287 aa17.14■□□□□ 0.33
SHANK2-220ENST00000608988 U3KQE9 123 aa17.14■□□□□ 0.33
SHANK2-220ENST00000608988 GVINP1Q7Z2Y8 2422 aa17.14■□□□□ 0.33
SHANK2-220ENST00000608988 CLEC3BP05452 202 aa17.14■□□□□ 0.33
SHANK2-220ENST00000608988 ATP6V0E2Q8NHE4 81 aa17.14■□□□□ 0.33
SHANK2-220ENST00000608988 TRBV7-1A0A0A6YYK4 115 aa17.13■□□□□ 0.33
SHANK2-220ENST00000608988 TMEM238LA0A1B0GVL6 79 aa17.13■□□□□ 0.33
SHANK2-220ENST00000608988 A6NJY4 79 aa17.13■□□□□ 0.33
SHANK2-220ENST00000608988 NEXN-AS1Q8NBZ9 246 aa17.13■□□□□ 0.33
SHANK2-220ENST00000608988 EEF1AKMT3Q96AZ1 226 aa17.13■□□□□ 0.33
SHANK2-220ENST00000608988 SCGB3A1Q96QR1 104 aa17.13■□□□□ 0.33
SHANK2-220ENST00000608988 MSRB2Q9Y3D2 182 aa17.13■□□□□ 0.33
SHANK2-220ENST00000608988 H3BMG7 143 aa17.12■□□□□ 0.33
SHANK2-220ENST00000608988 M0R381 172 aa17.12■□□□□ 0.33
SHANK2-220ENST00000608988 C8orf86Q6ZUL3 223 aa17.12■□□□□ 0.33
SHANK2-220ENST00000608988 GTSF1LQ9H1H1 148 aa17.12■□□□□ 0.33
SHANK2-220ENST00000608988 PPP1R17O96001 155 aa17.12■□□□□ 0.33
SHANK2-220ENST00000608988 MED14OSP0DP75 135 aa17.12■□□□□ 0.33
SHANK2-220ENST00000608988 EFNA4P52798 201 aa17.12■□□□□ 0.33
SHANK2-220ENST00000608988 LINC01560Q8TB33 94 aa17.12■□□□□ 0.33
SHANK2-220ENST00000608988 SPAG8Q99932 426 aaPredicted RBP17.12■□□□□ 0.33
SHANK2-220ENST00000608988 ZFHX2Q9C0A1 2572 aaPredicted RBP17.11■□□□□ 0.33
SHANK2-220ENST00000608988 TRAV26-2A0A0B4J265 109 aa17.11■□□□□ 0.33
SHANK2-220ENST00000608988 A0A1B0GV72 72 aa17.11■□□□□ 0.33
SHANK2-220ENST00000608988 LINC01549A6NIU2 74 aa17.11■□□□□ 0.33
SHANK2-220ENST00000608988 HOXA3O43365 443 aaPredicted RBP17.11■□□□□ 0.33
SHANK2-220ENST00000608988 PKDREJQ9NTG1 2253 aa17.1■□□□□ 0.33
SHANK2-220ENST00000608988 SUMO2P61956 95 aaKnown RBP17.1■□□□□ 0.33
SHANK2-220ENST00000608988 ROS1P08922 2347 aa17.1■□□□□ 0.33
SHANK2-220ENST00000608988 IGHV3OR16-8A0A075B7F1 116 aa17.1■□□□□ 0.33
SHANK2-220ENST00000608988 C9orf139Q6ZV77 190 aa17.1■□□□□ 0.33
SHANK2-220ENST00000608988 RAXQ9Y2V3 346 aa17.1■□□□□ 0.33
SHANK2-220ENST00000608988 ETDBQ3ZM63 59 aa17.09■□□□□ 0.33
SHANK2-220ENST00000608988 CCDC140Q96MF4 163 aa17.09■□□□□ 0.33
SHANK2-220ENST00000608988 DPH3P1Q9H4G8 78 aa17.09■□□□□ 0.33
SHANK2-220ENST00000608988 IGHV3-35A0A0C4DH35 117 aa17.08■□□□□ 0.33
SHANK2-220ENST00000608988 LGALS1P09382 135 aaKnown RBP17.08■□□□□ 0.33
SHANK2-220ENST00000608988 SMAGPQ0VAQ4 97 aa17.08■□□□□ 0.33
SHANK2-220ENST00000608988 LINC00477Q96M19 166 aa17.08■□□□□ 0.33
SHANK2-220ENST00000608988 H3BVH4 76 aa17.07■□□□□ 0.32
SHANK2-220ENST00000608988 LYRM7Q5U5X0 104 aa17.07■□□□□ 0.32
SHANK2-220ENST00000608988 ECSCRQ19T08 205 aa17.07■□□□□ 0.32
SHANK2-220ENST00000608988 CNOT1A5YKK6 2376 aaKnown RBP17.06■□□□□ 0.32
SHANK2-220ENST00000608988 ATP6V0E1O15342 81 aa17.06■□□□□ 0.32
SHANK2-220ENST00000608988 MORN3Q6PF18 240 aaPredicted RBP17.06■□□□□ 0.32
SHANK2-220ENST00000608988 CLEC19AQ6UXS0 136 aa17.06■□□□□ 0.32
SHANK2-220ENST00000608988 SH2D6Q7Z4S9 175 aa17.06■□□□□ 0.32
SHANK2-220ENST00000608988 RASL10AQ92737 203 aa17.06■□□□□ 0.32
SHANK2-220ENST00000608988 SPENQ96T58 3664 aaKnown RBP17.05■□□□□ 0.32
SHANK2-220ENST00000608988 TRAV21A0A0B4J279 112 aa17.05■□□□□ 0.32
SHANK2-220ENST00000608988 TCTEX1D4Q5JR98 221 aa17.05■□□□□ 0.32
SHANK2-220ENST00000608988 PAPPA-AS1Q5QFB9 102 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms