RNA–Protein interactions for RNA: ENST00000608456.5

HDDC2-205, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-205ENST00000608456 IGHV3-72A0A0B4J1Y9 119 aa4.95□□□□□ -1.62
HDDC2-205ENST00000608456 BUB3O43684 328 aa4.95□□□□□ -1.62
HDDC2-205ENST00000608456 APOMO95445 188 aa4.95□□□□□ -1.62
HDDC2-205ENST00000608456 CTSGP08311 255 aa4.95□□□□□ -1.62
HDDC2-205ENST00000608456 CNTFRP26992 372 aa4.95□□□□□ -1.62
HDDC2-205ENST00000608456 ZNF80P51504 273 aaPredicted RBP4.95□□□□□ -1.62
HDDC2-205ENST00000608456 HERVK_113P61574 105 aa4.95□□□□□ -1.62
HDDC2-205ENST00000608456 ERCC8Q13216 396 aa4.95□□□□□ -1.62
HDDC2-205ENST00000608456 TMEM78Q5T7P6 136 aa4.95□□□□□ -1.62
HDDC2-205ENST00000608456 Q6Q795 121 aa4.95□□□□□ -1.62
HDDC2-205ENST00000608456 TEN1Q86WV5 123 aa4.95□□□□□ -1.62
HDDC2-205ENST00000608456 Q8N6K4 173 aa4.95□□□□□ -1.62
HDDC2-205ENST00000608456 GLMPQ8WWB7 406 aa4.95□□□□□ -1.62
HDDC2-205ENST00000608456 TMEM141Q96I45 108 aa4.95□□□□□ -1.62
HDDC2-205ENST00000608456 SMIM2Q9BVW6 85 aa4.95□□□□□ -1.62
HDDC2-205ENST00000608456 SMAD5-AS1Q9Y6J3 95 aa4.95□□□□□ -1.62
HDDC2-205ENST00000608456 PLCE1Q9P212 2302 aa4.95□□□□□ -1.62
HDDC2-205ENST00000608456 MALRD1Q5VYJ5 2156 aa4.94□□□□□ -1.62
HDDC2-205ENST00000608456 TMSB15BA0A087X1C1 80 aa4.94□□□□□ -1.62
HDDC2-205ENST00000608456 IGHV3-21A0A0B4J1V1 117 aa4.94□□□□□ -1.62
HDDC2-205ENST00000608456 IGHV7-4-1A0A0J9YVY3 117 aa4.94□□□□□ -1.62
HDDC2-205ENST00000608456 ODF3BA8MYP8 253 aa4.94□□□□□ -1.62
HDDC2-205ENST00000608456 BRI3O95415 125 aa4.94□□□□□ -1.62
HDDC2-205ENST00000608456 SUMO2P61956 95 aaKnown RBP4.94□□□□□ -1.62
HDDC2-205ENST00000608456 BSPH1Q075Z2 132 aa4.94□□□□□ -1.62
HDDC2-205ENST00000608456 MRPL23Q16540 153 aaKnown RBP4.94□□□□□ -1.62
HDDC2-205ENST00000608456 MORN3Q6PF18 240 aaPredicted RBP4.94□□□□□ -1.62
HDDC2-205ENST00000608456 MAPKAPK5-AS1Q8N8E1 139 aa4.94□□□□□ -1.62
HDDC2-205ENST00000608456 FAM110DQ8TAY7 271 aaPredicted RBP4.94□□□□□ -1.62
HDDC2-205ENST00000608456 C18orf15Q96N68 181 aa4.94□□□□□ -1.62
HDDC2-205ENST00000608456 SCGB3A1Q96QR1 104 aa4.94□□□□□ -1.62
HDDC2-205ENST00000608456 SH3BGRL2Q9UJC5 107 aa4.94□□□□□ -1.62
HDDC2-205ENST00000608456 IGKV2-40A0A087WW87 121 aaPredicted RBP4.93□□□□□ -1.62
HDDC2-205ENST00000608456 TRBV7-1A0A0A6YYK4 115 aa4.93□□□□□ -1.62
HDDC2-205ENST00000608456 IGKV3D-20A0A0C4DH25 116 aa4.93□□□□□ -1.62
HDDC2-205ENST00000608456 E7EQL1 145 aa4.93□□□□□ -1.62
HDDC2-205ENST00000608456 SMKR1H3BMG3 65 aa4.93□□□□□ -1.62
HDDC2-205ENST00000608456 OVOL1O14753 267 aa4.93□□□□□ -1.62
HDDC2-205ENST00000608456 TIMM23O14925 209 aa4.93□□□□□ -1.62
HDDC2-205ENST00000608456 TSPAN13O95857 204 aa4.93□□□□□ -1.62
HDDC2-205ENST00000608456 IGKV2D-40P01614 121 aaPredicted RBP4.93□□□□□ -1.62
HDDC2-205ENST00000608456 LGALS1P09382 135 aaKnown RBP4.93□□□□□ -1.62
HDDC2-205ENST00000608456 CD7P09564 240 aa4.93□□□□□ -1.62
HDDC2-205ENST00000608456 COX6B1P14854 86 aa4.93□□□□□ -1.62
HDDC2-205ENST00000608456 HLA-DMBP28068 263 aa4.93□□□□□ -1.62
HDDC2-205ENST00000608456 DNAH14Q0VDD8 3507 aa4.93□□□□□ -1.62
HDDC2-205ENST00000608456 DEFB109BQ30KR1 87 aa4.93□□□□□ -1.62
HDDC2-205ENST00000608456 SPANXN1Q5VSR9 72 aa4.93□□□□□ -1.62
HDDC2-205ENST00000608456 C9orf139Q6ZV77 190 aa4.93□□□□□ -1.62
HDDC2-205ENST00000608456 WFDC3Q8IUB2 231 aa4.93□□□□□ -1.62
HDDC2-205ENST00000608456 APRG1Q8IVJ8 170 aa4.93□□□□□ -1.62
HDDC2-205ENST00000608456 RNF183Q96D59 192 aa4.93□□□□□ -1.62
HDDC2-205ENST00000608456 TIMM17AQ99595 171 aa4.93□□□□□ -1.62
HDDC2-205ENST00000608456 NAA38Q9BRA0 125 aaKnown RBP4.93□□□□□ -1.62
HDDC2-205ENST00000608456 AGPAT4-IT1Q9H0P7 198 aa4.93□□□□□ -1.62
HDDC2-205ENST00000608456 DPH3P1Q9H4G8 78 aa4.93□□□□□ -1.62
HDDC2-205ENST00000608456 GEMIN7Q9H840 131 aaKnown RBP4.93□□□□□ -1.62
HDDC2-205ENST00000608456 MSRB1Q9NZV6 116 aa4.93□□□□□ -1.62
HDDC2-205ENST00000608456 LAMA2P24043 3122 aaKnown RBP4.92□□□□□ -1.62
HDDC2-205ENST00000608456 ABCA1O95477 2261 aa4.92□□□□□ -1.62
HDDC2-205ENST00000608456 TRAV21A0A0B4J279 112 aa4.92□□□□□ -1.62
HDDC2-205ENST00000608456 A0A0G2JNJ9 132 aa4.92□□□□□ -1.62
HDDC2-205ENST00000608456 A0A0J9YX75 114 aa4.92□□□□□ -1.62
HDDC2-205ENST00000608456 C11orf86A6NJI1 115 aa4.92□□□□□ -1.62
HDDC2-205ENST00000608456 A8MWV9 139 aa4.92□□□□□ -1.62
HDDC2-205ENST00000608456 PLXNB1O43157 2135 aa4.92□□□□□ -1.62
HDDC2-205ENST00000608456 SPINK8P0C7L1 97 aa4.92□□□□□ -1.62
HDDC2-205ENST00000608456 ZNF688P0C7X2 276 aa4.92□□□□□ -1.62
HDDC2-205ENST00000608456 P0DMU3 169 aa4.92□□□□□ -1.62
HDDC2-205ENST00000608456 FAM231AP0DMU4 169 aa4.92□□□□□ -1.62
HDDC2-205ENST00000608456 FAM231CP0DMU5 169 aa4.92□□□□□ -1.62
HDDC2-205ENST00000608456 FBXL19-AS1Q494R0 122 aa4.92□□□□□ -1.62
HDDC2-205ENST00000608456 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.92□□□□□ -1.62
HDDC2-205ENST00000608456 SH2D6Q7Z4S9 175 aa4.92□□□□□ -1.62
HDDC2-205ENST00000608456 DYNAPQ8N1N2 210 aa4.92□□□□□ -1.62
HDDC2-205ENST00000608456 SLC25A29Q8N8R3 303 aa4.92□□□□□ -1.62
HDDC2-205ENST00000608456 TIMD4Q96H15 378 aa4.92□□□□□ -1.62
HDDC2-205ENST00000608456 CDIP1Q9H305 208 aa4.92□□□□□ -1.62
HDDC2-205ENST00000608456 Q9UFV3 132 aa4.92□□□□□ -1.62
HDDC2-205ENST00000608456 ERG28Q9UKR5 140 aa4.92□□□□□ -1.62
HDDC2-205ENST00000608456 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.91□□□□□ -1.62
HDDC2-205ENST00000608456 PRSS29PA6NIE9 313 aa4.91□□□□□ -1.62
HDDC2-205ENST00000608456 K7ERJ3 54 aa4.91□□□□□ -1.62
HDDC2-205ENST00000608456 VCYO14598 125 aa4.91□□□□□ -1.62
HDDC2-205ENST00000608456 NXPH4O95158 308 aa4.91□□□□□ -1.62
HDDC2-205ENST00000608456 SCGB1C2P0DMR2 95 aa4.91□□□□□ -1.62
HDDC2-205ENST00000608456 SRD5A1P18405 259 aa4.91□□□□□ -1.62
HDDC2-205ENST00000608456 CRIP2P52943 208 aaPredicted RBP4.91□□□□□ -1.62
HDDC2-205ENST00000608456 SRSF9Q13242 221 aaKnown RBP eCLIP4.91□□□□□ -1.62
HDDC2-205ENST00000608456 LPAL2Q16609 132 aa4.91□□□□□ -1.62
HDDC2-205ENST00000608456 PRR31Q5SQ13 230 aa4.91□□□□□ -1.62
HDDC2-205ENST00000608456 C2orf66Q6UXQ4 117 aa4.91□□□□□ -1.62
HDDC2-205ENST00000608456 Q6ZUT4 128 aa4.91□□□□□ -1.62
HDDC2-205ENST00000608456 NDUFA11Q86Y39 141 aa4.91□□□□□ -1.62
HDDC2-205ENST00000608456 Q8N1Y9 231 aa4.91□□□□□ -1.62
HDDC2-205ENST00000608456 C10orf126Q8N4M7 172 aa4.91□□□□□ -1.62
HDDC2-205ENST00000608456 SYT8Q8NBV8 401 aa4.91□□□□□ -1.62
HDDC2-205ENST00000608456 EEF1AKMT3Q96AZ1 226 aa4.91□□□□□ -1.62
HDDC2-205ENST00000608456 METTL26Q96S19 204 aa4.91□□□□□ -1.62
HDDC2-205ENST00000608456 A0A0B4J2C4 111 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms