RNA–Protein interactions for RNA: ENST00000608158.5

CTCFL-215, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-215ENST00000608158 LINC00477Q96M19 166 aa12.44□□□□□ -0.42
CTCFL-215ENST00000608158 SNRPD3P62318 126 aaKnown RBP12.43□□□□□ -0.42
CTCFL-215ENST00000608158 TMEM136Q6ZRR5 245 aa12.43□□□□□ -0.42
CTCFL-215ENST00000608158 PGLYRP4Q96LB8 373 aa12.43□□□□□ -0.42
CTCFL-215ENST00000608158 GNB1LQ9BYB4 327 aa12.43□□□□□ -0.42
CTCFL-215ENST00000608158 A0A1B0GXF2 115 aa12.43□□□□□ -0.42
CTCFL-215ENST00000608158 TMEM189A5PLL7 270 aa12.43□□□□□ -0.42
CTCFL-215ENST00000608158 C5orf52A6NGY3 159 aa12.43□□□□□ -0.42
CTCFL-215ENST00000608158 MT-ND6P03923 174 aa12.43□□□□□ -0.42
CTCFL-215ENST00000608158 SNRPEP62304 92 aaKnown RBP12.43□□□□□ -0.42
CTCFL-215ENST00000608158 PSMG4Q5JS54 123 aa12.43□□□□□ -0.42
CTCFL-215ENST00000608158 RASL11AQ6T310 242 aa12.43□□□□□ -0.42
CTCFL-215ENST00000608158 DYNLRB2Q8TF09 96 aa12.43□□□□□ -0.42
CTCFL-215ENST00000608158 MRPL18Q9H0U6 180 aaKnown RBP12.43□□□□□ -0.42
CTCFL-215ENST00000608158 SAV1Q9H4B6 383 aaPredicted RBP12.43□□□□□ -0.42
CTCFL-215ENST00000608158 TMSB15BA0A087X1C1 80 aa12.41□□□□□ -0.42
CTCFL-215ENST00000608158 XKRY2A2RUG3 117 aa12.41□□□□□ -0.42
CTCFL-215ENST00000608158 ADARB2-AS1A8MUL3 147 aa12.41□□□□□ -0.42
CTCFL-215ENST00000608158 FABP5P3A8MUU1 101 aa12.41□□□□□ -0.42
CTCFL-215ENST00000608158 FOXA3P55318 350 aaPredicted RBP12.41□□□□□ -0.42
CTCFL-215ENST00000608158 PAFAH1B2P68402 229 aa12.41□□□□□ -0.42
CTCFL-215ENST00000608158 Q6AWC8 147 aa12.41□□□□□ -0.42
CTCFL-215ENST00000608158 TMEM61Q8N0U2 210 aa12.41□□□□□ -0.42
CTCFL-215ENST00000608158 HLA-DQA1P01909 254 aa12.41□□□□□ -0.42
CTCFL-215ENST00000608158 PRR9Q5T870 116 aa12.41□□□□□ -0.42
CTCFL-215ENST00000608158 ZFAND2AQ8N6M9 145 aa12.41□□□□□ -0.42
CTCFL-215ENST00000608158 FAM19A4Q96LR4 140 aa12.41□□□□□ -0.42
CTCFL-215ENST00000608158 SETD2Q9BYW2 2564 aaPredicted RBP12.41□□□□□ -0.42
CTCFL-215ENST00000608158 NDUFA6P56556 154 aa12.4□□□□□ -0.42
CTCFL-215ENST00000608158 RPS20P60866 119 aaKnown RBP12.4□□□□□ -0.42
CTCFL-215ENST00000608158 RAB4BP61018 213 aa12.4□□□□□ -0.42
CTCFL-215ENST00000608158 HBBP68871 147 aa12.4□□□□□ -0.42
CTCFL-215ENST00000608158 LINC01559Q495D7 138 aa12.4□□□□□ -0.42
CTCFL-215ENST00000608158 TRAV2A0A0B4J234 112 aa12.39□□□□□ -0.43
CTCFL-215ENST00000608158 TRBV7-9A0A0J9YWB2 115 aa12.39□□□□□ -0.43
CTCFL-215ENST00000608158 UBE2CO00762 179 aa12.39□□□□□ -0.43
CTCFL-215ENST00000608158 F8P00451 2351 aa12.39□□□□□ -0.43
CTCFL-215ENST00000608158 ORM1P02763 201 aa12.39□□□□□ -0.43
CTCFL-215ENST00000608158 KRTAP10-3P60369 221 aa12.39□□□□□ -0.43
CTCFL-215ENST00000608158 GDF5OSQ5U4N7 250 aa12.39□□□□□ -0.43
CTCFL-215ENST00000608158 CRISP2P16562 243 aa12.38□□□□□ -0.43
CTCFL-215ENST00000608158 CAMPP49913 170 aa12.38□□□□□ -0.43
CTCFL-215ENST00000608158 DEFB114Q30KQ6 69 aa12.38□□□□□ -0.43
CTCFL-215ENST00000608158 TPPP3Q9BW30 176 aa12.38□□□□□ -0.43
CTCFL-215ENST00000608158 C11orf21Q9P2W6 132 aa12.38□□□□□ -0.43
CTCFL-215ENST00000608158 C2CD3Q4AC94 2353 aa12.38□□□□□ -0.43
CTCFL-215ENST00000608158 A0A0J9YX75 114 aa12.38□□□□□ -0.43
CTCFL-215ENST00000608158 NSUN5P1Q3KNT7 163 aa12.38□□□□□ -0.43
CTCFL-215ENST00000608158 APRG1Q8IVJ8 170 aa12.38□□□□□ -0.43
CTCFL-215ENST00000608158 A0A1B0GUS0 222 aa12.37□□□□□ -0.43
CTCFL-215ENST00000608158 A0A1B0GUT8 65 aa12.37□□□□□ -0.43
CTCFL-215ENST00000608158 J3KRW8 73 aa12.37□□□□□ -0.43
CTCFL-215ENST00000608158 ARMS2P0C7Q2 107 aa12.37□□□□□ -0.43
CTCFL-215ENST00000608158 CD33P20138 364 aa12.37□□□□□ -0.43
CTCFL-215ENST00000608158 CTRLP40313 264 aa12.37□□□□□ -0.43
CTCFL-215ENST00000608158 CD300EQ496F6 205 aaPredicted RBP12.37□□□□□ -0.43
CTCFL-215ENST00000608158 NDUFA11Q86Y39 141 aa12.37□□□□□ -0.43
CTCFL-215ENST00000608158 SIGLEC8Q9NYZ4 499 aa12.37□□□□□ -0.43
CTCFL-215ENST00000608158 IGKV3D-20A0A0C4DH25 116 aa12.36□□□□□ -0.43
CTCFL-215ENST00000608158 IGLC6P0CF74 106 aa12.36□□□□□ -0.43
CTCFL-215ENST00000608158 SLAQ13239 276 aa12.36□□□□□ -0.43
CTCFL-215ENST00000608158 ZNF575Q86XF7 245 aa12.36□□□□□ -0.43
CTCFL-215ENST00000608158 HOXA5P20719 270 aa12.36□□□□□ -0.43
CTCFL-215ENST00000608158 EBLN2Q6P2I7 272 aa12.36□□□□□ -0.43
CTCFL-215ENST00000608158 FOXI2Q6ZQN5 318 aa12.36□□□□□ -0.43
CTCFL-215ENST00000608158 Q6ZQT7 251 aa12.36□□□□□ -0.43
CTCFL-215ENST00000608158 FER1L6-AS1Q8NA97 138 aa12.36□□□□□ -0.43
CTCFL-215ENST00000608158 BORCS7Q96B45 105 aa12.36□□□□□ -0.43
CTCFL-215ENST00000608158 ODF3Q96PU9 254 aa12.36□□□□□ -0.43
CTCFL-215ENST00000608158 TRAV21A0A0B4J279 112 aa12.35□□□□□ -0.43
CTCFL-215ENST00000608158 APCSP02743 223 aa12.35□□□□□ -0.43
CTCFL-215ENST00000608158 RIGQ13278 110 aa12.35□□□□□ -0.43
CTCFL-215ENST00000608158 COA6Q5JTJ3 125 aaKnown RBP12.35□□□□□ -0.43
CTCFL-215ENST00000608158 LYZL1Q6UWQ5 148 aa12.35□□□□□ -0.43
CTCFL-215ENST00000608158 SPAG8Q99932 426 aaPredicted RBP12.35□□□□□ -0.43
CTCFL-215ENST00000608158 SSBP4Q9BWG4 385 aaPredicted RBP12.35□□□□□ -0.43
CTCFL-215ENST00000608158 GRIFINA4D1Z8 144 aa12.34□□□□□ -0.43
CTCFL-215ENST00000608158 KLLNB2CW77 178 aa12.34□□□□□ -0.43
CTCFL-215ENST00000608158 GPX1P07203 203 aa12.34□□□□□ -0.43
CTCFL-215ENST00000608158 TRAV25A0A0B4J276 109 aa12.34□□□□□ -0.43
CTCFL-215ENST00000608158 OR4C46A6NHA9 309 aa12.34□□□□□ -0.43
CTCFL-215ENST00000608158 DEFB131AP59861 70 aa12.34□□□□□ -0.43
CTCFL-215ENST00000608158 KIR3DS1Q14943 382 aa12.34□□□□□ -0.43
CTCFL-215ENST00000608158 KIAA1644Q3SXP7 199 aa12.34□□□□□ -0.43
CTCFL-215ENST00000608158 GFI1BQ5VTD9 330 aa12.34□□□□□ -0.43
CTCFL-215ENST00000608158 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.34□□□□□ -0.43
CTCFL-215ENST00000608158 A0A1B0GW15 77 aa12.33□□□□□ -0.44
CTCFL-215ENST00000608158 DUSP14O95147 198 aaKnown RBP12.33□□□□□ -0.44
CTCFL-215ENST00000608158 S100A8P05109 93 aa12.32□□□□□ -0.44
CTCFL-215ENST00000608158 RNASE4P34096 147 aaKnown RBP12.32□□□□□ -0.44
CTCFL-215ENST00000608158 LEPP41159 167 aa12.32□□□□□ -0.44
CTCFL-215ENST00000608158 PRR31Q5SQ13 230 aa12.32□□□□□ -0.44
CTCFL-215ENST00000608158 HIST3H2BBQ8N257 126 aa12.32□□□□□ -0.44
CTCFL-215ENST00000608158 GATD1Q8NB37 220 aa12.32□□□□□ -0.44
CTCFL-215ENST00000608158 MAP6D1Q9H9H5 199 aa12.32□□□□□ -0.44
CTCFL-215ENST00000608158 NAGKQ9UJ70 344 aa12.32□□□□□ -0.44
CTCFL-215ENST00000608158 IGKV3-20P01619 116 aa12.32□□□□□ -0.44
CTCFL-215ENST00000608158 AKR1D1P51857 326 aa12.32□□□□□ -0.44
CTCFL-215ENST00000608158 ZNF256Q9Y2P7 627 aaPredicted RBP12.32□□□□□ -0.44
CTCFL-215ENST00000608158 SRIP30626 198 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms