RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 HMSDA8MTL9 139 aa16.7■□□□□ 0.26
SSX2IP-209ENST00000603677 ARPC5O15511 151 aa16.7■□□□□ 0.26
SSX2IP-209ENST00000603677 NKX6-2Q9C056 277 aaPredicted RBP16.7■□□□□ 0.26
SSX2IP-209ENST00000603677 TP53TG3Q9ULZ0 132 aa16.7■□□□□ 0.26
SSX2IP-209ENST00000603677 CTXND1A0A1B0GTU2 59 aa16.69■□□□□ 0.26
SSX2IP-209ENST00000603677 A0A1W2PRE2 83 aa16.69■□□□□ 0.26
SSX2IP-209ENST00000603677 Q8TAT8 98 aa16.69■□□□□ 0.26
SSX2IP-209ENST00000603677 ARPC5LQ9BPX5 153 aa16.69■□□□□ 0.26
SSX2IP-209ENST00000603677 HMGB3O15347 200 aaKnown RBP16.68■□□□□ 0.26
SSX2IP-209ENST00000603677 TDRG1Q3Y452 100 aa16.68■□□□□ 0.26
SSX2IP-209ENST00000603677 AKR1C8PQ5T2L2 129 aa16.68■□□□□ 0.26
SSX2IP-209ENST00000603677 GOLT1AQ6ZVE7 132 aa16.68■□□□□ 0.26
SSX2IP-209ENST00000603677 UBE2DNLQ8IWF7 75 aa16.68■□□□□ 0.26
SSX2IP-209ENST00000603677 GSN-AS1Q9NRJ2 163 aa16.68■□□□□ 0.26
SSX2IP-209ENST00000603677 SPINK4O60575 86 aa16.67■□□□□ 0.26
SSX2IP-209ENST00000603677 PRR9Q5T870 116 aa16.67■□□□□ 0.26
SSX2IP-209ENST00000603677 NDFIP1Q9BT67 221 aa16.67■□□□□ 0.26
SSX2IP-209ENST00000603677 KLF12Q9Y4X4 402 aa16.67■□□□□ 0.26
SSX2IP-209ENST00000603677 A0A0D9SG52 128 aa16.66■□□□□ 0.26
SSX2IP-209ENST00000603677 GAGE12BA1L429 117 aa16.66■□□□□ 0.26
SSX2IP-209ENST00000603677 GAGE7O76087 117 aa16.66■□□□□ 0.26
SSX2IP-209ENST00000603677 GAGE12FP0CL80 117 aa16.66■□□□□ 0.26
SSX2IP-209ENST00000603677 GAGE12GP0CL81 117 aa16.66■□□□□ 0.26
SSX2IP-209ENST00000603677 GAGE12IP0CL82 117 aa16.66■□□□□ 0.26
SSX2IP-209ENST00000603677 ZNF415Q09FC8 603 aa16.66■□□□□ 0.26
SSX2IP-209ENST00000603677 FAM159AQ6UWV7 190 aa16.66■□□□□ 0.26
SSX2IP-209ENST00000603677 KCNRGQ8N5I3 272 aa16.66■□□□□ 0.26
SSX2IP-209ENST00000603677 VPS13DQ5THJ4 4388 aa16.66■□□□□ 0.26
SSX2IP-209ENST00000603677 TRGV11A0A075B6L2 103 aa16.65■□□□□ 0.26
SSX2IP-209ENST00000603677 TRAV21A0A0B4J279 112 aa16.65■□□□□ 0.26
SSX2IP-209ENST00000603677 EIF3GO75821 320 aaKnown RBP eCLIP16.65■□□□□ 0.26
SSX2IP-209ENST00000603677 TCRAP04437 139 aa16.65■□□□□ 0.26
SSX2IP-209ENST00000603677 SPXQ9BT56 116 aa16.65■□□□□ 0.26
SSX2IP-209ENST00000603677 CYTL1Q9NRR1 136 aa16.65■□□□□ 0.26
SSX2IP-209ENST00000603677 TRGV2A0A075B6R0 118 aa16.64■□□□□ 0.25
SSX2IP-209ENST00000603677 SUMO1P63165 101 aaKnown RBP16.64■□□□□ 0.25
SSX2IP-209ENST00000603677 EIF5AP63241 154 aaKnown RBP16.64■□□□□ 0.25
SSX2IP-209ENST00000603677 Q6ZTI0 123 aa16.64■□□□□ 0.25
SSX2IP-209ENST00000603677 KCNS1Q96KK3 526 aa16.64■□□□□ 0.25
SSX2IP-209ENST00000603677 TREM1Q9NP99 234 aa16.64■□□□□ 0.25
SSX2IP-209ENST00000603677 EPDR1Q9UM22 224 aa16.64■□□□□ 0.25
SSX2IP-209ENST00000603677 CCL18P55774 89 aa16.63■□□□□ 0.25
SSX2IP-209ENST00000603677 SLAQ13239 276 aa16.63■□□□□ 0.25
SSX2IP-209ENST00000603677 ATG101Q9BSB4 218 aa16.63■□□□□ 0.25
SSX2IP-209ENST00000603677 RPH3ALQ9UNE2 315 aa16.63■□□□□ 0.25
SSX2IP-209ENST00000603677 TRGV1A0A0A0MS02 117 aa16.62■□□□□ 0.25
SSX2IP-209ENST00000603677 SEC11BP0C7V7 166 aa16.62■□□□□ 0.25
SSX2IP-209ENST00000603677 OR5I1Q13606 314 aa16.62■□□□□ 0.25
SSX2IP-209ENST00000603677 LINC00336Q6ZUF6 198 aa16.62■□□□□ 0.25
SSX2IP-209ENST00000603677 CYB561D1Q8N8Q1 229 aa16.62■□□□□ 0.25
SSX2IP-209ENST00000603677 TMEM75Q8N9X5 138 aa16.62■□□□□ 0.25
SSX2IP-209ENST00000603677 UMAD1C9J7I0 102 aa16.61■□□□□ 0.25
SSX2IP-209ENST00000603677 ZNF726P1Q15940 193 aa16.61■□□□□ 0.25
SSX2IP-209ENST00000603677 SAPCD1Q5SSQ6 148 aa16.61■□□□□ 0.25
SSX2IP-209ENST00000603677 STOML3Q8TAV4 291 aa16.61■□□□□ 0.25
SSX2IP-209ENST00000603677 TCEAL7Q9BRU2 100 aa16.61■□□□□ 0.25
SSX2IP-209ENST00000603677 GGTLC3B5MD39 225 aa16.6■□□□□ 0.25
SSX2IP-209ENST00000603677 NUDT3O95989 172 aa16.6■□□□□ 0.25
SSX2IP-209ENST00000603677 ARL2-SNX15V9GYD0 113 aa16.6■□□□□ 0.25
SSX2IP-209ENST00000603677 DNAH6Q9C0G6 4158 aa16.6■□□□□ 0.25
SSX2IP-209ENST00000603677 MUC4Q99102 2169 aa16.6■□□□□ 0.25
SSX2IP-209ENST00000603677 TRAV26-1A0A087WT03 109 aa16.59■□□□□ 0.25
SSX2IP-209ENST00000603677 GNG5P63218 68 aa16.59■□□□□ 0.25
SSX2IP-209ENST00000603677 ZFP69Q49AA0 526 aa16.59■□□□□ 0.25
SSX2IP-209ENST00000603677 SSX7Q7RTT5 188 aa16.59■□□□□ 0.25
SSX2IP-209ENST00000603677 RASL10AQ92737 203 aa16.59■□□□□ 0.25
SSX2IP-209ENST00000603677 HIST1H2BAQ96A08 127 aa16.59■□□□□ 0.25
SSX2IP-209ENST00000603677 TRAV8-1A0A0A6YYK1 113 aa16.58■□□□□ 0.24
SSX2IP-209ENST00000603677 KANTRA0A1W2PQU2 76 aa16.58■□□□□ 0.24
SSX2IP-209ENST00000603677 PPT1P50897 306 aa16.58■□□□□ 0.24
SSX2IP-209ENST00000603677 FLI1Q01543 452 aaPredicted RBP16.58■□□□□ 0.24
SSX2IP-209ENST00000603677 DPPA3Q6W0C5 159 aa16.58■□□□□ 0.24
SSX2IP-209ENST00000603677 IQCF2Q8IXL9 164 aa16.58■□□□□ 0.24
SSX2IP-209ENST00000603677 TVP23CQ96ET8 276 aa16.58■□□□□ 0.24
SSX2IP-209ENST00000603677 TMPRSS5Q9H3S3 457 aa16.58■□□□□ 0.24
SSX2IP-209ENST00000603677 PSG8Q9UQ74 426 aa16.58■□□□□ 0.24
SSX2IP-209ENST00000603677 HOXA5P20719 270 aa16.57■□□□□ 0.24
SSX2IP-209ENST00000603677 FHITP49789 147 aa16.57■□□□□ 0.24
SSX2IP-209ENST00000603677 MUC21Q5SSG8 566 aa16.57■□□□□ 0.24
SSX2IP-209ENST00000603677 NACAE9PAV3 2078 aa16.57■□□□□ 0.24
SSX2IP-209ENST00000603677 MAP1LC3B2A6NCE7 125 aa16.56■□□□□ 0.24
SSX2IP-209ENST00000603677 SMLR1H3BR10 107 aa16.56■□□□□ 0.24
SSX2IP-209ENST00000603677 BCL2L11O43521 198 aa16.56■□□□□ 0.24
SSX2IP-209ENST00000603677 SMUG1Q53HV7 270 aa16.56■□□□□ 0.24
SSX2IP-209ENST00000603677 Q6ZQT7 251 aa16.56■□□□□ 0.24
SSX2IP-209ENST00000603677 Q6ZR54 194 aa16.56■□□□□ 0.24
SSX2IP-209ENST00000603677 OR11H4Q8NGC9 324 aa16.56■□□□□ 0.24
SSX2IP-209ENST00000603677 MAP1LC3BQ9GZQ8 125 aa16.56■□□□□ 0.24
SSX2IP-209ENST00000603677 SDF2L1Q9HCN8 221 aa16.56■□□□□ 0.24
SSX2IP-209ENST00000603677 EPPK1P58107 5090 aaKnown RBP16.56■□□□□ 0.24
SSX2IP-209ENST00000603677 F6UZH7 168 aa16.55■□□□□ 0.24
SSX2IP-209ENST00000603677 IGLV2-11P01706 119 aa16.55■□□□□ 0.24
SSX2IP-209ENST00000603677 PFN1P07737 140 aaKnown RBP16.55■□□□□ 0.24
SSX2IP-209ENST00000603677 TMEM183BQ1AE95 376 aa16.55■□□□□ 0.24
SSX2IP-209ENST00000603677 TMEM183AQ8IXX5 376 aa16.55■□□□□ 0.24
SSX2IP-209ENST00000603677 PRO0255Q9UI72 69 aa16.55■□□□□ 0.24
SSX2IP-209ENST00000603677 FAM74A7A6NL05 159 aa16.54■□□□□ 0.24
SSX2IP-209ENST00000603677 IFNA7P01567 189 aa16.54■□□□□ 0.24
SSX2IP-209ENST00000603677 LGALSLQ3ZCW2 172 aaPredicted RBP16.54■□□□□ 0.24
SSX2IP-209ENST00000603677 SOHLH1Q5JUK2 328 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms