RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 IGLC7A0M8Q6 106 aa3.81□□□□□ -1.8
VRK3-226ENST00000602029 FAM231BA6NCW3 169 aa3.81□□□□□ -1.8
VRK3-226ENST00000602029 HELTA6NFD8 242 aa3.81□□□□□ -1.8
VRK3-226ENST00000602029 FBLL1A6NHQ2 334 aaKnown RBP3.81□□□□□ -1.8
VRK3-226ENST00000602029 PRSS29PA6NIE9 313 aa3.81□□□□□ -1.8
VRK3-226ENST00000602029 SCGB2A1O75556 95 aa3.81□□□□□ -1.8
VRK3-226ENST00000602029 HLA-DQA1P01909 254 aa3.81□□□□□ -1.8
VRK3-226ENST00000602029 LINC00869P0C866 280 aa3.81□□□□□ -1.8
VRK3-226ENST00000602029 FABP4P15090 132 aa3.81□□□□□ -1.8
VRK3-226ENST00000602029 HLA-DMBP28068 263 aa3.81□□□□□ -1.8
VRK3-226ENST00000602029 S100A7P31151 101 aa3.81□□□□□ -1.8
VRK3-226ENST00000602029 ATP5G3P48201 142 aa3.81□□□□□ -1.8
VRK3-226ENST00000602029 EMP1P54849 157 aa3.81□□□□□ -1.8
VRK3-226ENST00000602029 TCTAP57738 103 aa3.81□□□□□ -1.8
VRK3-226ENST00000602029 PLP1P60201 277 aa3.81□□□□□ -1.8
VRK3-226ENST00000602029 RAB4BP61018 213 aa3.81□□□□□ -1.8
VRK3-226ENST00000602029 GAMTQ14353 236 aa3.81□□□□□ -1.8
VRK3-226ENST00000602029 CT83Q5H943 113 aa3.81□□□□□ -1.8
VRK3-226ENST00000602029 FAM78BQ5VT40 261 aa3.81□□□□□ -1.8
VRK3-226ENST00000602029 LINC00336Q6ZUF6 198 aa3.81□□□□□ -1.8
VRK3-226ENST00000602029 ARL6IP6Q8N6S5 226 aa3.81□□□□□ -1.8
VRK3-226ENST00000602029 TRGV9Q99603 122 aa3.81□□□□□ -1.8
VRK3-226ENST00000602029 C11orf68Q9H3H3 251 aaKnown RBP3.81□□□□□ -1.8
VRK3-226ENST00000602029 CLEC5AQ9NY25 188 aa3.81□□□□□ -1.8
VRK3-226ENST00000602029 TRAPPC1Q9Y5R8 145 aa3.81□□□□□ -1.8
VRK3-226ENST00000602029 LRP1BQ9NZR2 4599 aa3.81□□□□□ -1.8
VRK3-226ENST00000602029 MYCBP2O75592 4640 aa3.8□□□□□ -1.8
VRK3-226ENST00000602029 TRBV20OR9-2A0A075B6H5 130 aa3.8□□□□□ -1.8
VRK3-226ENST00000602029 IGLV2-18A0A075B6J9 118 aa3.8□□□□□ -1.8
VRK3-226ENST00000602029 IGHV3OR16-12A0A075B7B8 117 aa3.8□□□□□ -1.8
VRK3-226ENST00000602029 DEFB131BA0A096LNP1 70 aa3.8□□□□□ -1.8
VRK3-226ENST00000602029 IGHV4-28A0A0C4DH34 117 aa3.8□□□□□ -1.8
VRK3-226ENST00000602029 TRBV6-1A0A0K0K1D8 114 aa3.8□□□□□ -1.8
VRK3-226ENST00000602029 SCO2A0A1W2PP80 73 aa3.8□□□□□ -1.8
VRK3-226ENST00000602029 LINC00587B1AMM8 73 aa3.8□□□□□ -1.8
VRK3-226ENST00000602029 K7EMT4 169 aa3.8□□□□□ -1.8
VRK3-226ENST00000602029 CHEK1O14757 476 aa3.8□□□□□ -1.8
VRK3-226ENST00000602029 COX7A2P2O60397 106 aa3.8□□□□□ -1.8
VRK3-226ENST00000602029 OR7C2O60412 319 aa3.8□□□□□ -1.8
VRK3-226ENST00000602029 AMBPP02760 352 aa3.8□□□□□ -1.8
VRK3-226ENST00000602029 P0DMU3 169 aa3.8□□□□□ -1.8
VRK3-226ENST00000602029 FAM231AP0DMU4 169 aa3.8□□□□□ -1.8
VRK3-226ENST00000602029 FAM231CP0DMU5 169 aa3.8□□□□□ -1.8
VRK3-226ENST00000602029 GZMBP10144 247 aa3.8□□□□□ -1.8
VRK3-226ENST00000602029 HIST1H1EP10412 219 aaKnown RBP3.8□□□□□ -1.8
VRK3-226ENST00000602029 HTN3P15516 51 aa3.8□□□□□ -1.8
VRK3-226ENST00000602029 NPPCP23582 126 aa3.8□□□□□ -1.8
VRK3-226ENST00000602029 DDTP30046 118 aa3.8□□□□□ -1.8
VRK3-226ENST00000602029 ADMP35318 185 aa3.8□□□□□ -1.8
VRK3-226ENST00000602029 MFAP4P55083 255 aa3.8□□□□□ -1.8
VRK3-226ENST00000602029 SSTP61278 116 aa3.8□□□□□ -1.8
VRK3-226ENST00000602029 ZNF90Q03938 601 aa3.8□□□□□ -1.8
VRK3-226ENST00000602029 WT1-ASQ06250 92 aa3.8□□□□□ -1.8
VRK3-226ENST00000602029 C10orf113Q5VZT2 155 aa3.8□□□□□ -1.8
VRK3-226ENST00000602029 Q6ZTC4 211 aa3.8□□□□□ -1.8
VRK3-226ENST00000602029 OCC1Q8TAD7 63 aa3.8□□□□□ -1.8
VRK3-226ENST00000602029 IGF2BP2-AS1Q96M15 143 aa3.8□□□□□ -1.8
VRK3-226ENST00000602029 NDUFAF3Q9BU61 184 aa3.8□□□□□ -1.8
VRK3-226ENST00000602029 SEPSECSQ9HD40 501 aaKnown RBP3.8□□□□□ -1.8
VRK3-226ENST00000602029 DNAJC4Q9NNZ3 241 aa3.8□□□□□ -1.8
VRK3-226ENST00000602029 YTHDF2Q9Y5A9 579 aaKnown RBP3.8□□□□□ -1.8
VRK3-226ENST00000602029 F11RQ9Y624 299 aaKnown RBP3.8□□□□□ -1.8
VRK3-226ENST00000602029 IGKV1OR2-108A0A075B7D4 117 aa3.79□□□□□ -1.8
VRK3-226ENST00000602029 SERTM2A0A1B0GWG4 89 aa3.79□□□□□ -1.8
VRK3-226ENST00000602029 SMIM27A0A1W2PRY6 76 aa3.79□□□□□ -1.8
VRK3-226ENST00000602029 CGB1A6NKQ9 187 aa3.79□□□□□ -1.8
VRK3-226ENST00000602029 KNCNA6PVL3 124 aa3.79□□□□□ -1.8
VRK3-226ENST00000602029 J3QL48 77 aa3.79□□□□□ -1.8
VRK3-226ENST00000602029 ZNF688P0C7X2 276 aa3.79□□□□□ -1.8
VRK3-226ENST00000602029 CRISP2P16562 243 aa3.79□□□□□ -1.8
VRK3-226ENST00000602029 OR10J1P30954 320 aa3.79□□□□□ -1.8
VRK3-226ENST00000602029 UBE2G2P60604 165 aa3.79□□□□□ -1.8
VRK3-226ENST00000602029 ERVFC1-1P60608 527 aa3.79□□□□□ -1.8
VRK3-226ENST00000602029 UBE2L3P68036 154 aaKnown RBP3.79□□□□□ -1.8
VRK3-226ENST00000602029 SPINK9Q5DT21 86 aa3.79□□□□□ -1.8
VRK3-226ENST00000602029 CENPWQ5EE01 88 aa3.79□□□□□ -1.8
VRK3-226ENST00000602029 GCSAMLQ5JQS6 135 aa3.79□□□□□ -1.8
VRK3-226ENST00000602029 IBA57Q5T440 356 aaKnown RBP3.79□□□□□ -1.8
VRK3-226ENST00000602029 LYPD1Q8N2G4 141 aa3.79□□□□□ -1.8
VRK3-226ENST00000602029 C5orf17Q8NAS9 161 aa3.79□□□□□ -1.8
VRK3-226ENST00000602029 GRAMD2BQ96HH9 432 aa3.79□□□□□ -1.8
VRK3-226ENST00000602029 FMC1Q96HJ9 113 aa3.79□□□□□ -1.8
VRK3-226ENST00000602029 METTL26Q96S19 204 aa3.79□□□□□ -1.8
VRK3-226ENST00000602029 DERL1Q9BUN8 251 aa3.79□□□□□ -1.8
VRK3-226ENST00000602029 GFRA4Q9GZZ7 299 aa3.79□□□□□ -1.8
VRK3-226ENST00000602029 MS4A6AQ9H2W1 248 aa3.79□□□□□ -1.8
VRK3-226ENST00000602029 TMEM14CQ9P0S9 112 aa3.79□□□□□ -1.8
VRK3-226ENST00000602029 ZNF492Q9P255 531 aa3.79□□□□□ -1.8
VRK3-226ENST00000602029 APLNQ9ULZ1 77 aa3.79□□□□□ -1.8
VRK3-226ENST00000602029 KLF12Q9Y4X4 402 aa3.79□□□□□ -1.8
VRK3-226ENST00000602029 V9GYV3 84 aa3.79□□□□□ -1.8
VRK3-226ENST00000602029 TRAV30A0A087WSZ9 112 aa3.78□□□□□ -1.8
VRK3-226ENST00000602029 A0A1B0GW15 77 aa3.78□□□□□ -1.8
VRK3-226ENST00000602029 A0A1W2PS18 150 aa3.78□□□□□ -1.8
VRK3-226ENST00000602029 GGTLC3B5MD39 225 aa3.78□□□□□ -1.8
VRK3-226ENST00000602029 K7EIM0 57 aa3.78□□□□□ -1.8
VRK3-226ENST00000602029 K7EN84 100 aa3.78□□□□□ -1.8
VRK3-226ENST00000602029 PEX7O00628 323 aa3.78□□□□□ -1.8
VRK3-226ENST00000602029 MED14OSP0DP75 135 aa3.78□□□□□ -1.8
VRK3-226ENST00000602029 MIFP14174 115 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms