RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 ZNF266Q14584 549 aa15.7■□□□□ 0.1
SSBP4-209ENST00000601357 VSIG2Q96IQ7 327 aa15.7■□□□□ 0.1
SSBP4-209ENST00000601357 EIF3GO75821 320 aaKnown RBP eCLIP15.69■□□□□ 0.1
SSBP4-209ENST00000601357 ESRGQ1W209 222 aa15.69■□□□□ 0.1
SSBP4-209ENST00000601357 UPK3BQ9BT76 320 aa15.69■□□□□ 0.1
SSBP4-209ENST00000601357 PTTG1O95997 202 aa15.68■□□□□ 0.1
SSBP4-209ENST00000601357 C6orf223Q8N319 242 aa15.68■□□□□ 0.1
SSBP4-209ENST00000601357 Q9H8V8 135 aa15.68■□□□□ 0.1
SSBP4-209ENST00000601357 LENEPQ9Y5L5 61 aa15.68■□□□□ 0.1
SSBP4-209ENST00000601357 MED14OSP0DP75 135 aa15.67■□□□□ 0.1
SSBP4-209ENST00000601357 ACOT6Q3I5F7 207 aaPredicted RBP15.67■□□□□ 0.1
SSBP4-209ENST00000601357 PQLC2Q6ZP29 291 aa15.67■□□□□ 0.1
SSBP4-209ENST00000601357 TMED6Q8WW62 240 aa15.67■□□□□ 0.1
SSBP4-209ENST00000601357 ST6GAL2Q96JF0 529 aa15.67■□□□□ 0.1
SSBP4-209ENST00000601357 OTORQ9NRC9 128 aa15.67■□□□□ 0.1
SSBP4-209ENST00000601357 RAB2AP61019 212 aa15.66■□□□□ 0.1
SSBP4-209ENST00000601357 Q6AWC8 147 aa15.66■□□□□ 0.1
SSBP4-209ENST00000601357 KRTAP17-1Q9BYP8 105 aa15.66■□□□□ 0.1
SSBP4-209ENST00000601357 MUC4Q99102 2169 aa15.65■□□□□ 0.1
SSBP4-209ENST00000601357 A0A096LPF7 62 aa15.65■□□□□ 0.1
SSBP4-209ENST00000601357 TNP2Q05952 138 aa15.65■□□□□ 0.1
SSBP4-209ENST00000601357 ARPC5LQ9BPX5 153 aa15.65■□□□□ 0.1
SSBP4-209ENST00000601357 MRPL16Q9NX20 251 aaKnown RBP15.65■□□□□ 0.1
SSBP4-209ENST00000601357 MRPS16Q9Y3D3 137 aaKnown RBP15.65■□□□□ 0.1
SSBP4-209ENST00000601357 A0A1W2PPV4 95 aa15.64■□□□□ 0.09
SSBP4-209ENST00000601357 ZNF415Q09FC8 603 aa15.64■□□□□ 0.09
SSBP4-209ENST00000601357 ARL6IP6Q8N6S5 226 aa15.64■□□□□ 0.09
SSBP4-209ENST00000601357 HYLS1Q96M11 299 aa15.64■□□□□ 0.09
SSBP4-209ENST00000601357 AQP10Q96PS8 301 aa15.64■□□□□ 0.09
SSBP4-209ENST00000601357 KRTAP1-5Q9BYS1 174 aa15.64■□□□□ 0.09
SSBP4-209ENST00000601357 PGPA6NDG6 321 aa15.63■□□□□ 0.09
SSBP4-209ENST00000601357 MUC21Q5SSG8 566 aa15.63■□□□□ 0.09
SSBP4-209ENST00000601357 OR10G4Q8NGN3 311 aa15.63■□□□□ 0.09
SSBP4-209ENST00000601357 OR10G9Q8NGN4 311 aa15.63■□□□□ 0.09
SSBP4-209ENST00000601357 OR10G7Q8NGN6 311 aa15.63■□□□□ 0.09
SSBP4-209ENST00000601357 OR2G3Q8NGZ4 309 aa15.63■□□□□ 0.09
SSBP4-209ENST00000601357 TTC32Q5I0X7 151 aa15.62■□□□□ 0.09
SSBP4-209ENST00000601357 FAM74A1Q5RGS3 127 aa15.62■□□□□ 0.09
SSBP4-209ENST00000601357 MDFICQ9P1T7 246 aa15.62■□□□□ 0.09
SSBP4-209ENST00000601357 RYR1P21817 5038 aa15.62■□□□□ 0.09
SSBP4-209ENST00000601357 TDRG1Q3Y452 100 aa15.61■□□□□ 0.09
SSBP4-209ENST00000601357 CMTM2Q8TAZ6 248 aa15.61■□□□□ 0.09
SSBP4-209ENST00000601357 MED28Q9H204 178 aa15.61■□□□□ 0.09
SSBP4-209ENST00000601357 HMGB3O15347 200 aaKnown RBP15.6■□□□□ 0.09
SSBP4-209ENST00000601357 IGHV3-53P01767 116 aa15.6■□□□□ 0.09
SSBP4-209ENST00000601357 Q5BKY6 102 aa15.6■□□□□ 0.09
SSBP4-209ENST00000601357 GOLT1AQ6ZVE7 132 aa15.6■□□□□ 0.09
SSBP4-209ENST00000601357 ZNF575Q86XF7 245 aa15.6■□□□□ 0.09
SSBP4-209ENST00000601357 HSD17B11Q8NBQ5 300 aa15.6■□□□□ 0.09
SSBP4-209ENST00000601357 PSMG3Q9BT73 122 aaPredicted RBP15.6■□□□□ 0.09
SSBP4-209ENST00000601357 PRO0255Q9UI72 69 aa15.6■□□□□ 0.09
SSBP4-209ENST00000601357 A0A1W2PPQ1 181 aa15.59■□□□□ 0.09
SSBP4-209ENST00000601357 PAX4O43316 350 aa15.59■□□□□ 0.09
SSBP4-209ENST00000601357 STAG3L2P0CL84 134 aa15.59■□□□□ 0.09
SSBP4-209ENST00000601357 STAG3L3P0CL85 134 aa15.59■□□□□ 0.09
SSBP4-209ENST00000601357 ARL14EPLP0DKL9 152 aa15.59■□□□□ 0.09
SSBP4-209ENST00000601357 CDC34P49427 236 aaPredicted RBP15.59■□□□□ 0.09
SSBP4-209ENST00000601357 FHL2Q14192 279 aa15.59■□□□□ 0.09
SSBP4-209ENST00000601357 SUN5Q8TC36 379 aa15.59■□□□□ 0.09
SSBP4-209ENST00000601357 TVP23CQ96ET8 276 aa15.59■□□□□ 0.09
SSBP4-209ENST00000601357 RPH3ALQ9UNE2 315 aa15.59■□□□□ 0.09
SSBP4-209ENST00000601357 CRYBA4P53673 196 aa15.58■□□□□ 0.08
SSBP4-209ENST00000601357 SLAQ13239 276 aa15.58■□□□□ 0.08
SSBP4-209ENST00000601357 TMEM183BQ1AE95 376 aa15.58■□□□□ 0.08
SSBP4-209ENST00000601357 FAM159AQ6UWV7 190 aa15.58■□□□□ 0.08
SSBP4-209ENST00000601357 TMEM183AQ8IXX5 376 aa15.58■□□□□ 0.08
SSBP4-209ENST00000601357 RASL10AQ92737 203 aa15.58■□□□□ 0.08
SSBP4-209ENST00000601357 ICOSQ9Y6W8 199 aa15.58■□□□□ 0.08
SSBP4-209ENST00000601357 TRGV11A0A075B6L2 103 aa15.57■□□□□ 0.08
SSBP4-209ENST00000601357 TRAV8-1A0A0A6YYK1 113 aa15.57■□□□□ 0.08
SSBP4-209ENST00000601357 GIPP09681 153 aaPredicted RBP15.57■□□□□ 0.08
SSBP4-209ENST00000601357 ATP6V0CP27449 155 aa15.57■□□□□ 0.08
SSBP4-209ENST00000601357 ASB13Q8WXK3 278 aa15.57■□□□□ 0.08
SSBP4-209ENST00000601357 RAB24Q969Q5 203 aa15.57■□□□□ 0.08
SSBP4-209ENST00000601357 SPXQ9BT56 116 aa15.57■□□□□ 0.08
SSBP4-209ENST00000601357 HHLA3Q9XRX5 114 aa15.57■□□□□ 0.08
SSBP4-209ENST00000601357 GNG5P63218 68 aa15.56■□□□□ 0.08
SSBP4-209ENST00000601357 SERF2P84101 59 aa15.56■□□□□ 0.08
SSBP4-209ENST00000601357 IQCF2Q8IXL9 164 aa15.56■□□□□ 0.08
SSBP4-209ENST00000601357 BTF3P20290 206 aaKnown RBP15.55■□□□□ 0.08
SSBP4-209ENST00000601357 C8orf49Q96NF6 230 aa15.55■□□□□ 0.08
SSBP4-209ENST00000601357 SH3BGRL3Q9H299 93 aa15.55■□□□□ 0.08
SSBP4-209ENST00000601357 TREM1Q9NP99 234 aa15.55■□□□□ 0.08
SSBP4-209ENST00000601357 TRAV21A0A0B4J279 112 aa15.54■□□□□ 0.08
SSBP4-209ENST00000601357 F6UZH7 168 aa15.54■□□□□ 0.08
SSBP4-209ENST00000601357 MBP02144 154 aa15.54■□□□□ 0.08
SSBP4-209ENST00000601357 GCHFRP30047 84 aa15.54■□□□□ 0.08
SSBP4-209ENST00000601357 ZNF479Q96JC4 524 aa15.54■□□□□ 0.08
SSBP4-209ENST00000601357 NAGKQ9UJ70 344 aa15.54■□□□□ 0.08
SSBP4-209ENST00000601357 IGHV3-16A0A0C4DH30 117 aa15.53■□□□□ 0.08
SSBP4-209ENST00000601357 SERTM2A0A1B0GWG4 89 aa15.53■□□□□ 0.08
SSBP4-209ENST00000601357 RNF222A6NCQ9 220 aa15.53■□□□□ 0.08
SSBP4-209ENST00000601357 GNRH2O43555 120 aa15.53■□□□□ 0.08
SSBP4-209ENST00000601357 SFTA3P0C7M3 94 aa15.53■□□□□ 0.08
SSBP4-209ENST00000601357 C5orf17Q8NAS9 161 aa15.53■□□□□ 0.08
SSBP4-209ENST00000601357 TNFSF18Q9UNG2 199 aa15.53■□□□□ 0.08
SSBP4-209ENST00000601357 TCRAP04437 139 aa15.52■□□□□ 0.08
SSBP4-209ENST00000601357 MRPL23Q16540 153 aaKnown RBP15.52■□□□□ 0.08
SSBP4-209ENST00000601357 TRGV4A0A0C4DH28 118 aa15.51■□□□□ 0.07
SSBP4-209ENST00000601357 SIVA1O15304 175 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms