RNA–Protein interactions for RNA: ENST00000601038.5

SCAF1-204, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-204ENST00000601038 PHYHIPLQ96FC7 376 aa11.65□□□□□ -0.54
SCAF1-204ENST00000601038 HHLA3Q9XRX5 114 aa11.65□□□□□ -0.54
SCAF1-204ENST00000601038 OR7C2O60412 319 aa11.64□□□□□ -0.55
SCAF1-204ENST00000601038 PRAF2O60831 178 aa11.64□□□□□ -0.55
SCAF1-204ENST00000601038 CRYBA4P53673 196 aa11.64□□□□□ -0.55
SCAF1-204ENST00000601038 RANP62826 216 aaKnown RBP11.64□□□□□ -0.55
SCAF1-204ENST00000601038 ZNF415Q09FC8 603 aa11.64□□□□□ -0.55
SCAF1-204ENST00000601038 FHL2Q14192 279 aa11.64□□□□□ -0.55
SCAF1-204ENST00000601038 ZNF266Q14584 549 aa11.64□□□□□ -0.55
SCAF1-204ENST00000601038 Q6ZRN7 208 aaPredicted RBP11.64□□□□□ -0.55
SCAF1-204ENST00000601038 Q8N1X5 172 aa11.64□□□□□ -0.55
SCAF1-204ENST00000601038 Q8TAT8 98 aa11.64□□□□□ -0.55
SCAF1-204ENST00000601038 ABCA13Q86UQ4 5058 aa11.63□□□□□ -0.55
SCAF1-204ENST00000601038 UPK1BO75841 260 aa11.63□□□□□ -0.55
SCAF1-204ENST00000601038 NXPH4O95158 308 aa11.63□□□□□ -0.55
SCAF1-204ENST00000601038 MRPL23Q16540 153 aaKnown RBP11.63□□□□□ -0.55
SCAF1-204ENST00000601038 ATP5SQ99766 215 aa11.63□□□□□ -0.55
SCAF1-204ENST00000601038 INMT-MINDY4F8WBC2 141 aa11.62□□□□□ -0.55
SCAF1-204ENST00000601038 H2BFSP57053 126 aa11.62□□□□□ -0.55
SCAF1-204ENST00000601038 LYPD5Q6UWN5 251 aa11.62□□□□□ -0.55
SCAF1-204ENST00000601038 PPP1R1CQ8WVI7 109 aa11.62□□□□□ -0.55
SCAF1-204ENST00000601038 C8orf49Q96NF6 230 aa11.62□□□□□ -0.55
SCAF1-204ENST00000601038 LENEPQ9Y5L5 61 aa11.62□□□□□ -0.55
SCAF1-204ENST00000601038 HSPG2P98160 4391 aa11.62□□□□□ -0.55
SCAF1-204ENST00000601038 UBE2L3P68036 154 aaKnown RBP11.61□□□□□ -0.55
SCAF1-204ENST00000601038 FFAR4Q5NUL3 377 aa11.61□□□□□ -0.55
SCAF1-204ENST00000601038 MUC21Q5SSG8 566 aa11.61□□□□□ -0.55
SCAF1-204ENST00000601038 Q6AWC8 147 aa11.61□□□□□ -0.55
SCAF1-204ENST00000601038 NEGR1Q7Z3B1 354 aa11.61□□□□□ -0.55
SCAF1-204ENST00000601038 IQCF2Q8IXL9 164 aa11.61□□□□□ -0.55
SCAF1-204ENST00000601038 MDFICQ9P1T7 246 aa11.61□□□□□ -0.55
SCAF1-204ENST00000601038 TRGV4A0A0C4DH28 118 aa11.6□□□□□ -0.55
SCAF1-204ENST00000601038 DIRC3C9JPN6 131 aa11.6□□□□□ -0.55
SCAF1-204ENST00000601038 TAS2R45P59539 299 aa11.6□□□□□ -0.55
SCAF1-204ENST00000601038 IFITM3Q01628 133 aa11.6□□□□□ -0.55
SCAF1-204ENST00000601038 KHDC3LQ587J8 217 aa11.6□□□□□ -0.55
SCAF1-204ENST00000601038 SCGB1C1Q8TD33 95 aa11.6□□□□□ -0.55
SCAF1-204ENST00000601038 RASL10AQ92737 203 aa11.6□□□□□ -0.55
SCAF1-204ENST00000601038 SPXQ9BT56 116 aa11.6□□□□□ -0.55
SCAF1-204ENST00000601038 SCRT2Q9NQ03 307 aa11.6□□□□□ -0.55
SCAF1-204ENST00000601038 HSPB11Q9Y547 144 aa11.6□□□□□ -0.55
SCAF1-204ENST00000601038 LRP1BQ9NZR2 4599 aa11.59□□□□□ -0.55
SCAF1-204ENST00000601038 MPC2O95563 127 aa11.59□□□□□ -0.55
SCAF1-204ENST00000601038 IFNA5P01569 189 aa11.59□□□□□ -0.55
SCAF1-204ENST00000601038 FAM159AQ6UWV7 190 aa11.59□□□□□ -0.55
SCAF1-204ENST00000601038 OR10G4Q8NGN3 311 aa11.59□□□□□ -0.55
SCAF1-204ENST00000601038 TMED6Q8WW62 240 aa11.59□□□□□ -0.55
SCAF1-204ENST00000601038 MARVELD1Q9BSK0 173 aa11.59□□□□□ -0.55
SCAF1-204ENST00000601038 PGPEP1Q9NXJ5 209 aa11.59□□□□□ -0.55
SCAF1-204ENST00000601038 TRGV11A0A075B6L2 103 aa11.58□□□□□ -0.56
SCAF1-204ENST00000601038 SFTA3P0C7M3 94 aa11.58□□□□□ -0.56
SCAF1-204ENST00000601038 PET100P0DJ07 73 aa11.58□□□□□ -0.56
SCAF1-204ENST00000601038 TMEM183BQ1AE95 376 aa11.58□□□□□ -0.56
SCAF1-204ENST00000601038 TMEM183AQ8IXX5 376 aa11.58□□□□□ -0.56
SCAF1-204ENST00000601038 ZNF479Q96JC4 524 aa11.58□□□□□ -0.56
SCAF1-204ENST00000601038 TRAV9-2A0A087WT02 112 aa11.57□□□□□ -0.56
SCAF1-204ENST00000601038 K7EQD1 137 aa11.57□□□□□ -0.56
SCAF1-204ENST00000601038 EREGO14944 169 aa11.57□□□□□ -0.56
SCAF1-204ENST00000601038 RPL12P30050 165 aaKnown RBP11.57□□□□□ -0.56
SCAF1-204ENST00000601038 SRIP30626 198 aa11.57□□□□□ -0.56
SCAF1-204ENST00000601038 TDRG1Q3Y452 100 aa11.57□□□□□ -0.56
SCAF1-204ENST00000601038 NFE4Q86UQ8 179 aa11.57□□□□□ -0.56
SCAF1-204ENST00000601038 HYLS1Q96M11 299 aa11.57□□□□□ -0.56
SCAF1-204ENST00000601038 OTORQ9NRC9 128 aa11.57□□□□□ -0.56
SCAF1-204ENST00000601038 TNFRSF18Q9Y5U5 241 aa11.57□□□□□ -0.56
SCAF1-204ENST00000601038 PGPA6NDG6 321 aa11.56□□□□□ -0.56
SCAF1-204ENST00000601038 K7EP13 123 aa11.56□□□□□ -0.56
SCAF1-204ENST00000601038 ORM1P02763 201 aa11.56□□□□□ -0.56
SCAF1-204ENST00000601038 ERVFC1-1P60608 527 aa11.56□□□□□ -0.56
SCAF1-204ENST00000601038 FAM74A1Q5RGS3 127 aa11.56□□□□□ -0.56
SCAF1-204ENST00000601038 ARL6IP6Q8N6S5 226 aa11.56□□□□□ -0.56
SCAF1-204ENST00000601038 CMTM2Q8TAZ6 248 aa11.56□□□□□ -0.56
SCAF1-204ENST00000601038 SMIM3Q9BZL3 60 aa11.56□□□□□ -0.56
SCAF1-204ENST00000601038 MBD2Q9UBB5 411 aa11.56□□□□□ -0.56
SCAF1-204ENST00000601038 LY96Q9Y6Y9 160 aa11.56□□□□□ -0.56
SCAF1-204ENST00000601038 SSNA1O43805 119 aa11.55□□□□□ -0.56
SCAF1-204ENST00000601038 GYPEP15421 78 aa11.55□□□□□ -0.56
SCAF1-204ENST00000601038 CDPF1Q6NVV7 123 aa11.55□□□□□ -0.56
SCAF1-204ENST00000601038 PQLC2Q6ZP29 291 aa11.55□□□□□ -0.56
SCAF1-204ENST00000601038 PCNPQ8WW12 178 aaKnown RBP11.55□□□□□ -0.56
SCAF1-204ENST00000601038 TRAV4A0A0B4J268 109 aa11.54□□□□□ -0.56
SCAF1-204ENST00000601038 TXNDC17Q9BRA2 123 aa11.54□□□□□ -0.56
SCAF1-204ENST00000601038 WFDC1Q9HC57 220 aa11.54□□□□□ -0.56
SCAF1-204ENST00000601038 PTTG2Q9NZH5 202 aa11.54□□□□□ -0.56
SCAF1-204ENST00000601038 NAGKQ9UJ70 344 aa11.54□□□□□ -0.56
SCAF1-204ENST00000601038 IGHV3-16A0A0C4DH30 117 aa11.53□□□□□ -0.56
SCAF1-204ENST00000601038 A0A1W2PPV4 95 aa11.53□□□□□ -0.56
SCAF1-204ENST00000601038 C9JCJ5 164 aa11.53□□□□□ -0.56
SCAF1-204ENST00000601038 M0R2P5 195 aa11.53□□□□□ -0.56
SCAF1-204ENST00000601038 GNRH2O43555 120 aa11.53□□□□□ -0.56
SCAF1-204ENST00000601038 EIF3GO75821 320 aaKnown RBP eCLIP11.53□□□□□ -0.56
SCAF1-204ENST00000601038 ACOT6Q3I5F7 207 aaPredicted RBP11.53□□□□□ -0.56
SCAF1-204ENST00000601038 GOLT1AQ6ZVE7 132 aa11.53□□□□□ -0.56
SCAF1-204ENST00000601038 OR4C5Q8NGB2 326 aa11.53□□□□□ -0.56
SCAF1-204ENST00000601038 RPH3ALQ9UNE2 315 aa11.53□□□□□ -0.56
SCAF1-204ENST00000601038 TRAV21A0A0B4J279 112 aa11.52□□□□□ -0.57
SCAF1-204ENST00000601038 A6NHS1 94 aa11.52□□□□□ -0.57
SCAF1-204ENST00000601038 DNAH10OSP0CZ25 163 aa11.52□□□□□ -0.57
SCAF1-204ENST00000601038 EVI2AP22794 236 aa11.52□□□□□ -0.57
SCAF1-204ENST00000601038 DEFA1P59665 94 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms