RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 TRBV7-9A0A0J9YWB2 115 aa10.37□□□□□ -0.75
SHKBP1-226ENST00000600791 C16orf90A8MZG2 172 aa10.37□□□□□ -0.75
SHKBP1-226ENST00000600791 RANP62826 216 aaKnown RBP10.37□□□□□ -0.75
SHKBP1-226ENST00000600791 FFAR4Q5NUL3 377 aa10.37□□□□□ -0.75
SHKBP1-226ENST00000600791 ST6GAL2Q96JF0 529 aa10.37□□□□□ -0.75
SHKBP1-226ENST00000600791 ARPC5LQ9BPX5 153 aa10.37□□□□□ -0.75
SHKBP1-226ENST00000600791 SMIM3Q9BZL3 60 aa10.37□□□□□ -0.75
SHKBP1-226ENST00000600791 MRPL16Q9NX20 251 aaKnown RBP10.37□□□□□ -0.75
SHKBP1-226ENST00000600791 RBAKDNA6NC62 111 aa10.36□□□□□ -0.75
SHKBP1-226ENST00000600791 IGHV3-53P01767 116 aa10.36□□□□□ -0.75
SHKBP1-226ENST00000600791 RPL12P30050 165 aaKnown RBP10.36□□□□□ -0.75
SHKBP1-226ENST00000600791 CSN1S1P47710 185 aa10.36□□□□□ -0.75
SHKBP1-226ENST00000600791 KHDC3LQ587J8 217 aa10.36□□□□□ -0.75
SHKBP1-226ENST00000600791 LYPD1Q8N2G4 141 aa10.36□□□□□ -0.75
SHKBP1-226ENST00000600791 MBD2Q9UBB5 411 aa10.36□□□□□ -0.75
SHKBP1-226ENST00000600791 A0A1W2PPQ1 181 aa10.35□□□□□ -0.75
SHKBP1-226ENST00000600791 EIF3GO75821 320 aaKnown RBP eCLIP10.35□□□□□ -0.75
SHKBP1-226ENST00000600791 IFNA5P01569 189 aa10.35□□□□□ -0.75
SHKBP1-226ENST00000600791 DEFA1P59665 94 aa10.35□□□□□ -0.75
SHKBP1-226ENST00000600791 DEFA3P59666 94 aa10.35□□□□□ -0.75
SHKBP1-226ENST00000600791 ZNF415Q09FC8 603 aa10.35□□□□□ -0.75
SHKBP1-226ENST00000600791 ZNF266Q14584 549 aa10.35□□□□□ -0.75
SHKBP1-226ENST00000600791 SCGB1C1Q8TD33 95 aa10.35□□□□□ -0.75
SHKBP1-226ENST00000600791 APOBP04114 4563 aaKnown RBP10.35□□□□□ -0.75
SHKBP1-226ENST00000600791 DIRC3C9JPN6 131 aa10.34□□□□□ -0.75
SHKBP1-226ENST00000600791 TAS2R45P59539 299 aa10.34□□□□□ -0.75
SHKBP1-226ENST00000600791 MUC21Q5SSG8 566 aa10.34□□□□□ -0.75
SHKBP1-226ENST00000600791 DNAH5Q8TE73 4624 aa10.34□□□□□ -0.75
SHKBP1-226ENST00000600791 PAX4O43316 350 aa10.33□□□□□ -0.76
SHKBP1-226ENST00000600791 Q6AWC8 147 aa10.33□□□□□ -0.76
SHKBP1-226ENST00000600791 WFDC1Q9HC57 220 aa10.33□□□□□ -0.76
SHKBP1-226ENST00000600791 PRO0255Q9UI72 69 aa10.33□□□□□ -0.76
SHKBP1-226ENST00000600791 ICOSQ9Y6W8 199 aa10.33□□□□□ -0.76
SHKBP1-226ENST00000600791 SPATA12Q7Z6I5 190 aa10.32□□□□□ -0.76
SHKBP1-226ENST00000600791 HYLS1Q96M11 299 aa10.32□□□□□ -0.76
SHKBP1-226ENST00000600791 KRTAP4-5Q9BYR2 181 aa10.32□□□□□ -0.76
SHKBP1-226ENST00000600791 OTORQ9NRC9 128 aa10.32□□□□□ -0.76
SHKBP1-226ENST00000600791 MDFICQ9P1T7 246 aa10.32□□□□□ -0.76
SHKBP1-226ENST00000600791 LENEPQ9Y5L5 61 aa10.32□□□□□ -0.76
SHKBP1-226ENST00000600791 SIVA1O15304 175 aa10.31□□□□□ -0.76
SHKBP1-226ENST00000600791 CDK2AP2O75956 126 aa10.31□□□□□ -0.76
SHKBP1-226ENST00000600791 BTF3P20290 206 aaKnown RBP10.31□□□□□ -0.76
SHKBP1-226ENST00000600791 CRYBA4P53673 196 aa10.31□□□□□ -0.76
SHKBP1-226ENST00000600791 LINC00315P59091 139 aa10.31□□□□□ -0.76
SHKBP1-226ENST00000600791 FHL2Q14192 279 aa10.31□□□□□ -0.76
SHKBP1-226ENST00000600791 TMED6Q8WW62 240 aa10.31□□□□□ -0.76
SHKBP1-226ENST00000600791 C8orf49Q96NF6 230 aa10.31□□□□□ -0.76
SHKBP1-226ENST00000600791 RPH3ALQ9UNE2 315 aa10.31□□□□□ -0.76
SHKBP1-226ENST00000600791 HHLA3Q9XRX5 114 aa10.31□□□□□ -0.76
SHKBP1-226ENST00000600791 NXPH4O95158 308 aa10.3□□□□□ -0.76
SHKBP1-226ENST00000600791 RAB2AP61019 212 aa10.3□□□□□ -0.76
SHKBP1-226ENST00000600791 SLAQ13239 276 aa10.3□□□□□ -0.76
SHKBP1-226ENST00000600791 TMEM183BQ1AE95 376 aa10.3□□□□□ -0.76
SHKBP1-226ENST00000600791 ACOT6Q3I5F7 207 aaPredicted RBP10.3□□□□□ -0.76
SHKBP1-226ENST00000600791 FAM159AQ6UWV7 190 aa10.3□□□□□ -0.76
SHKBP1-226ENST00000600791 PQLC2Q6ZP29 291 aa10.3□□□□□ -0.76
SHKBP1-226ENST00000600791 TMEM183AQ8IXX5 376 aa10.3□□□□□ -0.76
SHKBP1-226ENST00000600791 TRGV11A0A075B6L2 103 aa10.29□□□□□ -0.76
SHKBP1-226ENST00000600791 A0A1W2PPV4 95 aa10.29□□□□□ -0.76
SHKBP1-226ENST00000600791 PGPA6NDG6 321 aa10.29□□□□□ -0.76
SHKBP1-226ENST00000600791 SFTA3P0C7M3 94 aa10.29□□□□□ -0.76
SHKBP1-226ENST00000600791 KRTAP10-2P60368 255 aa10.29□□□□□ -0.76
SHKBP1-226ENST00000600791 FAM74A1Q5RGS3 127 aa10.29□□□□□ -0.76
SHKBP1-226ENST00000600791 GOLT1AQ6ZVE7 132 aa10.29□□□□□ -0.76
SHKBP1-226ENST00000600791 CMTM2Q8TAZ6 248 aa10.29□□□□□ -0.76
SHKBP1-226ENST00000600791 ZNF479Q96JC4 524 aa10.29□□□□□ -0.76
SHKBP1-226ENST00000600791 NAGKQ9UJ70 344 aa10.29□□□□□ -0.76
SHKBP1-226ENST00000600791 TRGV4A0A0C4DH28 118 aa10.28□□□□□ -0.76
SHKBP1-226ENST00000600791 HMGB3O15347 200 aaKnown RBP10.28□□□□□ -0.76
SHKBP1-226ENST00000600791 MRPL23Q16540 153 aaKnown RBP10.28□□□□□ -0.76
SHKBP1-226ENST00000600791 TDRG1Q3Y452 100 aa10.28□□□□□ -0.76
SHKBP1-226ENST00000600791 Q6ZRN7 208 aaPredicted RBP10.28□□□□□ -0.76
SHKBP1-226ENST00000600791 OR10G4Q8NGN3 311 aa10.28□□□□□ -0.76
SHKBP1-226ENST00000600791 RASL10AQ92737 203 aa10.28□□□□□ -0.76
SHKBP1-226ENST00000600791 SPXQ9BT56 116 aa10.28□□□□□ -0.76
SHKBP1-226ENST00000600791 ALG5Q9Y673 324 aa10.28□□□□□ -0.76
SHKBP1-226ENST00000600791 TRAV8-1A0A0A6YYK1 113 aa10.27□□□□□ -0.77
SHKBP1-226ENST00000600791 F6UZH7 168 aa10.27□□□□□ -0.77
SHKBP1-226ENST00000600791 LYPD5Q6UWN5 251 aa10.27□□□□□ -0.77
SHKBP1-226ENST00000600791 IQCF2Q8IXL9 164 aa10.27□□□□□ -0.77
SHKBP1-226ENST00000600791 OR10G9Q8NGN4 311 aa10.27□□□□□ -0.77
SHKBP1-226ENST00000600791 OR10G7Q8NGN6 311 aa10.27□□□□□ -0.77
SHKBP1-226ENST00000600791 TVP23CQ96ET8 276 aa10.27□□□□□ -0.77
SHKBP1-226ENST00000600791 K7EQD1 137 aa10.26□□□□□ -0.77
SHKBP1-226ENST00000600791 ARL14EPLP0DKL9 152 aa10.26□□□□□ -0.77
SHKBP1-226ENST00000600791 GNG5P63218 68 aa10.26□□□□□ -0.77
SHKBP1-226ENST00000600791 NEGR1Q7Z3B1 354 aa10.26□□□□□ -0.77
SHKBP1-226ENST00000600791 ARL6IP6Q8N6S5 226 aa10.26□□□□□ -0.77
SHKBP1-226ENST00000600791 MAPKAPK5-AS1Q8N8E1 139 aa10.26□□□□□ -0.77
SHKBP1-226ENST00000600791 TRAV21A0A0B4J279 112 aa10.25□□□□□ -0.77
SHKBP1-226ENST00000600791 IGHV3-16A0A0C4DH30 117 aa10.25□□□□□ -0.77
SHKBP1-226ENST00000600791 GNRH2O43555 120 aa10.25□□□□□ -0.77
SHKBP1-226ENST00000600791 SRIP30626 198 aa10.25□□□□□ -0.77
SHKBP1-226ENST00000600791 CDC34P49427 236 aaPredicted RBP10.25□□□□□ -0.77
SHKBP1-226ENST00000600791 HSD17B11Q8NBQ5 300 aa10.25□□□□□ -0.77
SHKBP1-226ENST00000600791 OR2G3Q8NGZ4 309 aa10.25□□□□□ -0.77
SHKBP1-226ENST00000600791 TREM1Q9NP99 234 aa10.25□□□□□ -0.77
SHKBP1-226ENST00000600791 TRAV4A0A0B4J268 109 aa10.24□□□□□ -0.77
SHKBP1-226ENST00000600791 M0R2P5 195 aa10.24□□□□□ -0.77
SHKBP1-226ENST00000600791 TYMSP04818 313 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms