RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 IBA57Q5T440 356 aaKnown RBP6.18□□□□□ -1.42
SSBP4-208ENST00000600628 TMEM78Q5T7P6 136 aa6.18□□□□□ -1.42
SSBP4-208ENST00000600628 Q8TAT8 98 aa6.18□□□□□ -1.42
SSBP4-208ENST00000600628 NDUFAF3Q9BU61 184 aa6.18□□□□□ -1.42
SSBP4-208ENST00000600628 CTXND1A0A1B0GTU2 59 aa6.17□□□□□ -1.42
SSBP4-208ENST00000600628 PGPA6NDG6 321 aa6.17□□□□□ -1.42
SSBP4-208ENST00000600628 CBY3A6NI87 242 aa6.17□□□□□ -1.42
SSBP4-208ENST00000600628 HMGB3O15347 200 aaKnown RBP6.17□□□□□ -1.42
SSBP4-208ENST00000600628 CXorf1O96002 111 aa6.17□□□□□ -1.42
SSBP4-208ENST00000600628 C1QBP02746 253 aa6.17□□□□□ -1.42
SSBP4-208ENST00000600628 CSN1S1P47710 185 aa6.17□□□□□ -1.42
SSBP4-208ENST00000600628 DAD1P61803 113 aa6.17□□□□□ -1.42
SSBP4-208ENST00000600628 EIF4E3Q8N5X7 224 aaKnown RBP6.17□□□□□ -1.42
SSBP4-208ENST00000600628 C5orf17Q8NAS9 161 aa6.17□□□□□ -1.42
SSBP4-208ENST00000600628 ACTR3CQ9C0K3 210 aaPredicted RBP6.17□□□□□ -1.42
SSBP4-208ENST00000600628 TMEM167BQ9NRX6 74 aa6.17□□□□□ -1.42
SSBP4-208ENST00000600628 A0A0D9SG52 128 aa6.16□□□□□ -1.42
SSBP4-208ENST00000600628 SERTM2A0A1B0GWG4 89 aa6.16□□□□□ -1.42
SSBP4-208ENST00000600628 TCRAP04437 139 aa6.16□□□□□ -1.42
SSBP4-208ENST00000600628 GPX1P07203 203 aa6.16□□□□□ -1.42
SSBP4-208ENST00000600628 SEC11BP0C7V7 166 aa6.16□□□□□ -1.42
SSBP4-208ENST00000600628 HTN1P15515 57 aa6.16□□□□□ -1.42
SSBP4-208ENST00000600628 TCL1AP56279 114 aa6.16□□□□□ -1.42
SSBP4-208ENST00000600628 CCDC28AQ8IWP9 274 aa6.16□□□□□ -1.42
SSBP4-208ENST00000600628 ZNF680Q8NEM1 530 aa6.16□□□□□ -1.42
SSBP4-208ENST00000600628 HYLS1Q96M11 299 aa6.16□□□□□ -1.42
SSBP4-208ENST00000600628 ARPC5LQ9BPX5 153 aa6.16□□□□□ -1.42
SSBP4-208ENST00000600628 NOP10Q9NPE3 64 aaKnown RBP6.16□□□□□ -1.42
SSBP4-208ENST00000600628 DYNC1H1Q14204 4646 aaKnown RBP6.15□□□□□ -1.42
SSBP4-208ENST00000600628 IGHV1OR15-1A0A075B7D0 117 aa6.15□□□□□ -1.42
SSBP4-208ENST00000600628 TRAV8-1A0A0A6YYK1 113 aa6.15□□□□□ -1.42
SSBP4-208ENST00000600628 BCL2L11O43521 198 aa6.15□□□□□ -1.42
SSBP4-208ENST00000600628 SPINK4O60575 86 aa6.15□□□□□ -1.42
SSBP4-208ENST00000600628 P0DMU3 169 aa6.15□□□□□ -1.42
SSBP4-208ENST00000600628 FAM231AP0DMU4 169 aa6.15□□□□□ -1.42
SSBP4-208ENST00000600628 FAM231CP0DMU5 169 aa6.15□□□□□ -1.42
SSBP4-208ENST00000600628 DEFB130BP0DP73 79 aa6.15□□□□□ -1.42
SSBP4-208ENST00000600628 DEFB130AP0DP74 79 aa6.15□□□□□ -1.42
SSBP4-208ENST00000600628 HTN3P15516 51 aa6.15□□□□□ -1.42
SSBP4-208ENST00000600628 RNASE4P34096 147 aaKnown RBP6.15□□□□□ -1.42
SSBP4-208ENST00000600628 LGALS9BQ3B8N2 356 aa6.15□□□□□ -1.42
SSBP4-208ENST00000600628 TMEM88Q6PEY1 159 aa6.15□□□□□ -1.42
SSBP4-208ENST00000600628 Q6ZTI0 123 aa6.15□□□□□ -1.42
SSBP4-208ENST00000600628 COX8CQ7Z4L0 72 aa6.15□□□□□ -1.42
SSBP4-208ENST00000600628 POM121L12Q8N7R1 296 aa6.15□□□□□ -1.42
SSBP4-208ENST00000600628 STOML3Q8TAV4 291 aa6.15□□□□□ -1.42
SSBP4-208ENST00000600628 MBD3L1Q8WWY6 194 aa6.15□□□□□ -1.42
SSBP4-208ENST00000600628 GSN-AS1Q9NRJ2 163 aa6.15□□□□□ -1.42
SSBP4-208ENST00000600628 EPDR1Q9UM22 224 aa6.15□□□□□ -1.42
SSBP4-208ENST00000600628 KLF12Q9Y4X4 402 aa6.15□□□□□ -1.42
SSBP4-208ENST00000600628 ARL2-SNX15V9GYD0 113 aa6.15□□□□□ -1.42
SSBP4-208ENST00000600628 FAM74A7A6NL05 159 aa6.14□□□□□ -1.43
SSBP4-208ENST00000600628 UMAD1C9J7I0 102 aa6.14□□□□□ -1.43
SSBP4-208ENST00000600628 H3BNG1 76 aa6.14□□□□□ -1.43
SSBP4-208ENST00000600628 J3KRW8 73 aa6.14□□□□□ -1.43
SSBP4-208ENST00000600628 ATP5G1P05496 136 aa6.14□□□□□ -1.43
SSBP4-208ENST00000600628 HOXA5P20719 270 aa6.14□□□□□ -1.43
SSBP4-208ENST00000600628 ATP5G3P48201 142 aa6.14□□□□□ -1.43
SSBP4-208ENST00000600628 FHITP49789 147 aa6.14□□□□□ -1.43
SSBP4-208ENST00000600628 SUMO1P63165 101 aaKnown RBP6.14□□□□□ -1.43
SSBP4-208ENST00000600628 GNG5P63218 68 aa6.14□□□□□ -1.43
SSBP4-208ENST00000600628 LGALSLQ3ZCW2 172 aaPredicted RBP6.14□□□□□ -1.43
SSBP4-208ENST00000600628 RNF212Q495C1 297 aa6.14□□□□□ -1.43
SSBP4-208ENST00000600628 FAM74A1Q5RGS3 127 aa6.14□□□□□ -1.43
SSBP4-208ENST00000600628 GOLT1AQ6ZVE7 132 aa6.14□□□□□ -1.43
SSBP4-208ENST00000600628 TMUB2Q71RG4 321 aa6.14□□□□□ -1.43
SSBP4-208ENST00000600628 ZNF575Q86XF7 245 aa6.14□□□□□ -1.43
SSBP4-208ENST00000600628 TMEM75Q8N9X5 138 aa6.14□□□□□ -1.43
SSBP4-208ENST00000600628 C15orf53Q8NAA6 179 aa6.14□□□□□ -1.43
SSBP4-208ENST00000600628 NKX6-2Q9C056 277 aaPredicted RBP6.14□□□□□ -1.43
SSBP4-208ENST00000600628 TMPRSS5Q9H3S3 457 aa6.14□□□□□ -1.43
SSBP4-208ENST00000600628 FBLL1A6NHQ2 334 aaKnown RBP6.13□□□□□ -1.43
SSBP4-208ENST00000600628 ZNF80P51504 273 aaPredicted RBP6.13□□□□□ -1.43
SSBP4-208ENST00000600628 NKX2-5P52952 324 aaPredicted RBP6.13□□□□□ -1.43
SSBP4-208ENST00000600628 AKR1C8PQ5T2L2 129 aa6.13□□□□□ -1.43
SSBP4-208ENST00000600628 Q6ZR54 194 aa6.13□□□□□ -1.43
SSBP4-208ENST00000600628 CYB561D1Q8N8Q1 229 aa6.13□□□□□ -1.43
SSBP4-208ENST00000600628 CMTM2Q8TAZ6 248 aa6.13□□□□□ -1.43
SSBP4-208ENST00000600628 RASL10AQ92737 203 aa6.13□□□□□ -1.43
SSBP4-208ENST00000600628 ATG101Q9BSB4 218 aa6.13□□□□□ -1.43
SSBP4-208ENST00000600628 MDFICQ9P1T7 246 aa6.13□□□□□ -1.43
SSBP4-208ENST00000600628 C11orf21Q9P2W6 132 aa6.13□□□□□ -1.43
SSBP4-208ENST00000600628 TRAV1-1A0A0B4J248 108 aa6.12□□□□□ -1.43
SSBP4-208ENST00000600628 TRBV6-1A0A0K0K1D8 114 aa6.12□□□□□ -1.43
SSBP4-208ENST00000600628 MAP1LC3B2A6NCE7 125 aa6.12□□□□□ -1.43
SSBP4-208ENST00000600628 SNURFLB1AK76 121 aa6.12□□□□□ -1.43
SSBP4-208ENST00000600628 F5H768 121 aa6.12□□□□□ -1.43
SSBP4-208ENST00000600628 FLI1Q01543 452 aaPredicted RBP6.12□□□□□ -1.43
SSBP4-208ENST00000600628 DPPA3Q6W0C5 159 aa6.12□□□□□ -1.43
SSBP4-208ENST00000600628 HIST1H2BAQ96A08 127 aa6.12□□□□□ -1.43
SSBP4-208ENST00000600628 VSIG2Q96IQ7 327 aa6.12□□□□□ -1.43
SSBP4-208ENST00000600628 TCEAL7Q9BRU2 100 aa6.12□□□□□ -1.43
SSBP4-208ENST00000600628 MAP1LC3BQ9GZQ8 125 aa6.12□□□□□ -1.43
SSBP4-208ENST00000600628 TREM1Q9NP99 234 aa6.12□□□□□ -1.43
SSBP4-208ENST00000600628 TRAV21A0A0B4J279 112 aa6.11□□□□□ -1.43
SSBP4-208ENST00000600628 IGHV3-16A0A0C4DH30 117 aa6.11□□□□□ -1.43
SSBP4-208ENST00000600628 GAGE12BA1L429 117 aa6.11□□□□□ -1.43
SSBP4-208ENST00000600628 GAGE7O76087 117 aa6.11□□□□□ -1.43
SSBP4-208ENST00000600628 GAGE12FP0CL80 117 aa6.11□□□□□ -1.43
SSBP4-208ENST00000600628 GAGE12GP0CL81 117 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms