RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 PPDPFLQ8WWR9 84 aa12.54□□□□□ -0.4
SYDE1-204ENST00000600440 EP300Q09472 2414 aaPredicted RBP12.54□□□□□ -0.4
SYDE1-204ENST00000600440 A0A087WX48 190 aa12.53□□□□□ -0.4
SYDE1-204ENST00000600440 K7EM74 188 aa12.53□□□□□ -0.4
SYDE1-204ENST00000600440 TAL2Q16559 108 aa12.53□□□□□ -0.4
SYDE1-204ENST00000600440 PLEKHB2Q96CS7 222 aa12.53□□□□□ -0.4
SYDE1-204ENST00000600440 IGHV3-66A0A0C4DH42 116 aa12.53□□□□□ -0.4
SYDE1-204ENST00000600440 LGALS1P09382 135 aaKnown RBP12.53□□□□□ -0.4
SYDE1-204ENST00000600440 Q8N8P6 123 aa12.53□□□□□ -0.4
SYDE1-204ENST00000600440 LINC00574Q9H8X3 128 aa12.53□□□□□ -0.4
SYDE1-204ENST00000600440 TRBV6-1A0A0K0K1D8 114 aa12.53□□□□□ -0.4
SYDE1-204ENST00000600440 PRSS33Q8NF86 280 aa12.53□□□□□ -0.4
SYDE1-204ENST00000600440 TRAV8-2A0A0B4J237 113 aa12.52□□□□□ -0.4
SYDE1-204ENST00000600440 SLC25A16P16260 332 aa12.52□□□□□ -0.4
SYDE1-204ENST00000600440 ARL3P36405 182 aa12.52□□□□□ -0.4
SYDE1-204ENST00000600440 SRSF6Q13247 344 aaKnown RBP12.52□□□□□ -0.4
SYDE1-204ENST00000600440 PRADC1Q9BSG0 188 aa12.52□□□□□ -0.4
SYDE1-204ENST00000600440 IGLC6P0CF74 106 aa12.52□□□□□ -0.41
SYDE1-204ENST00000600440 RNF182Q8N6D2 247 aa12.52□□□□□ -0.41
SYDE1-204ENST00000600440 SCGB3A1Q96QR1 104 aa12.52□□□□□ -0.41
SYDE1-204ENST00000600440 K7EIM0 57 aa12.51□□□□□ -0.41
SYDE1-204ENST00000600440 TCL1BO95988 128 aa12.51□□□□□ -0.41
SYDE1-204ENST00000600440 FAM27E3Q08E93 113 aa12.51□□□□□ -0.41
SYDE1-204ENST00000600440 ANKRD29Q8N6D5 301 aa12.51□□□□□ -0.41
SYDE1-204ENST00000600440 AKAP6Q13023 2319 aa12.51□□□□□ -0.41
SYDE1-204ENST00000600440 A8MWV9 139 aa12.51□□□□□ -0.41
SYDE1-204ENST00000600440 GATA4P43694 442 aa12.51□□□□□ -0.41
SYDE1-204ENST00000600440 PSMG4Q5JS54 123 aa12.51□□□□□ -0.41
SYDE1-204ENST00000600440 TEN1Q86WV5 123 aa12.51□□□□□ -0.41
SYDE1-204ENST00000600440 LYPD1Q8N2G4 141 aa12.51□□□□□ -0.41
SYDE1-204ENST00000600440 C3orf56Q8N813 242 aa12.51□□□□□ -0.41
SYDE1-204ENST00000600440 HIF1ANQ9NWT6 349 aa12.51□□□□□ -0.41
SYDE1-204ENST00000600440 PLNP26678 52 aa12.51□□□□□ -0.41
SYDE1-204ENST00000600440 ZNF474Q6S9Z5 364 aaPredicted RBP12.51□□□□□ -0.41
SYDE1-204ENST00000600440 ONECUT1Q9UBC0 465 aa12.51□□□□□ -0.41
SYDE1-204ENST00000600440 TMEM30BQ3MIR4 351 aa12.5□□□□□ -0.41
SYDE1-204ENST00000600440 Q6ZQT7 251 aa12.5□□□□□ -0.41
SYDE1-204ENST00000600440 CFHR4Q92496 578 aa12.5□□□□□ -0.41
SYDE1-204ENST00000600440 FABP5P3A8MUU1 101 aa12.5□□□□□ -0.41
SYDE1-204ENST00000600440 VSTM5A8MXK1 200 aa12.5□□□□□ -0.41
SYDE1-204ENST00000600440 PRAC2D3DTV9 90 aa12.5□□□□□ -0.41
SYDE1-204ENST00000600440 SCGB2A1O75556 95 aa12.5□□□□□ -0.41
SYDE1-204ENST00000600440 ZNF688P0C7X2 276 aa12.5□□□□□ -0.41
SYDE1-204ENST00000600440 SPANXN1Q5VSR9 72 aa12.5□□□□□ -0.41
SYDE1-204ENST00000600440 IL17RELQ6ZVW7 336 aa12.5□□□□□ -0.41
SYDE1-204ENST00000600440 RAX2Q96IS3 184 aa12.5□□□□□ -0.41
SYDE1-204ENST00000600440 A6NJY4 79 aa12.49□□□□□ -0.41
SYDE1-204ENST00000600440 F8VRH5 84 aa12.49□□□□□ -0.41
SYDE1-204ENST00000600440 CCDC179H3BU77 68 aa12.49□□□□□ -0.41
SYDE1-204ENST00000600440 H7C1H1 209 aa12.49□□□□□ -0.41
SYDE1-204ENST00000600440 FDCSPQ8NFU4 85 aa12.49□□□□□ -0.41
SYDE1-204ENST00000600440 IGLV3-9A0A075B6K5 115 aa12.49□□□□□ -0.41
SYDE1-204ENST00000600440 IGHV3-49A0A0A0MS15 119 aa12.49□□□□□ -0.41
SYDE1-204ENST00000600440 IGHV1-8P0DP01 117 aa12.49□□□□□ -0.41
SYDE1-204ENST00000600440 TDHQ8IZJ6 230 aa12.49□□□□□ -0.41
SYDE1-204ENST00000600440 PIEZO2Q9H5I5 2752 aa12.49□□□□□ -0.41
SYDE1-204ENST00000600440 MRPS12O15235 138 aaKnown RBP12.48□□□□□ -0.41
SYDE1-204ENST00000600440 GFRALQ6UXV0 394 aa12.48□□□□□ -0.41
SYDE1-204ENST00000600440 DYNAPQ8N1N2 210 aa12.48□□□□□ -0.41
SYDE1-204ENST00000600440 SPRY4Q9C004 299 aa12.48□□□□□ -0.41
SYDE1-204ENST00000600440 HES1Q14469 280 aa12.48□□□□□ -0.41
SYDE1-204ENST00000600440 APC2O95996 2303 aa12.48□□□□□ -0.41
SYDE1-204ENST00000600440 SPTBN2O15020 2390 aa12.48□□□□□ -0.41
SYDE1-204ENST00000600440 IGHV1-3A0A0C4DH29 117 aa12.48□□□□□ -0.41
SYDE1-204ENST00000600440 GAGE2BQ13066 116 aa12.48□□□□□ -0.41
SYDE1-204ENST00000600440 GAGE2EQ4V326 116 aa12.48□□□□□ -0.41
SYDE1-204ENST00000600440 AJUBAQ96IF1 538 aa12.48□□□□□ -0.41
SYDE1-204ENST00000600440 GAGE2DQ9UEU5 116 aa12.48□□□□□ -0.41
SYDE1-204ENST00000600440 C9JAW5 83 aa12.47□□□□□ -0.41
SYDE1-204ENST00000600440 CEACAM4O75871 244 aa12.47□□□□□ -0.41
SYDE1-204ENST00000600440 TTC32Q5I0X7 151 aa12.47□□□□□ -0.41
SYDE1-204ENST00000600440 PVRIGQ6DKI7 326 aa12.47□□□□□ -0.41
SYDE1-204ENST00000600440 ATP6V0E2Q8NHE4 81 aa12.47□□□□□ -0.41
SYDE1-204ENST00000600440 SNCGO76070 127 aa12.47□□□□□ -0.41
SYDE1-204ENST00000600440 DKK4Q9UBT3 224 aa12.47□□□□□ -0.41
SYDE1-204ENST00000600440 TRBV7-9A0A0J9YWB2 115 aa12.46□□□□□ -0.41
SYDE1-204ENST00000600440 RPL7P18124 248 aaKnown RBP12.46□□□□□ -0.41
SYDE1-204ENST00000600440 LOXP28300 417 aaPredicted RBP12.46□□□□□ -0.41
SYDE1-204ENST00000600440 BEX4Q9NWD9 120 aaPredicted RBP12.46□□□□□ -0.41
SYDE1-204ENST00000600440 NBASA2RRP1 2371 aa12.46□□□□□ -0.41
SYDE1-204ENST00000600440 TRAV4A0A0B4J268 109 aa12.46□□□□□ -0.41
SYDE1-204ENST00000600440 CD40P25942 277 aa12.46□□□□□ -0.41
SYDE1-204ENST00000600440 TEX36Q5VZQ5 186 aa12.46□□□□□ -0.41
SYDE1-204ENST00000600440 IGLV2-18A0A075B6J9 118 aa12.46□□□□□ -0.42
SYDE1-204ENST00000600440 ZNF575Q86XF7 245 aa12.46□□□□□ -0.42
SYDE1-204ENST00000600440 SVEP1Q4LDE5 3571 aa12.45□□□□□ -0.42
SYDE1-204ENST00000600440 M0R381 172 aa12.45□□□□□ -0.42
SYDE1-204ENST00000600440 CRLF1O75462 422 aa12.45□□□□□ -0.42
SYDE1-204ENST00000600440 TRPT1Q86TN4 253 aaKnown RBP12.45□□□□□ -0.42
SYDE1-204ENST00000600440 SEM1Q6ZVN7 128 aa12.45□□□□□ -0.42
SYDE1-204ENST00000600440 OR11H6Q8NGC7 330 aa12.45□□□□□ -0.42
SYDE1-204ENST00000600440 LAMTOR5O43504 91 aa12.44□□□□□ -0.42
SYDE1-204ENST00000600440 CRIP2P52943 208 aaPredicted RBP12.44□□□□□ -0.42
SYDE1-204ENST00000600440 C11orf21Q9P2W6 132 aa12.44□□□□□ -0.42
SYDE1-204ENST00000600440 MGPP08493 103 aa12.44□□□□□ -0.42
SYDE1-204ENST00000600440 NHLRC4P0CG21 123 aaPredicted RBP12.44□□□□□ -0.42
SYDE1-204ENST00000600440 IGKV3D-20A0A0C4DH25 116 aa12.43□□□□□ -0.42
SYDE1-204ENST00000600440 PDE6HQ13956 83 aa12.43□□□□□ -0.42
SYDE1-204ENST00000600440 LYNX1G3V0Z9 82 aa12.43□□□□□ -0.42
SYDE1-204ENST00000600440 IGHG3P01860 377 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms