RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.65□□□□□ -1.18
NFKB1-212ENST00000600343 ZNF826PQ6ZT77 177 aa7.65□□□□□ -1.18
NFKB1-212ENST00000600343 ZCCHC24Q8N2G6 241 aaKnown RBP7.65□□□□□ -1.18
NFKB1-212ENST00000600343 FAM19A4Q96LR4 140 aa7.65□□□□□ -1.18
NFKB1-212ENST00000600343 METTL26Q96S19 204 aa7.65□□□□□ -1.18
NFKB1-212ENST00000600343 RS1O15537 224 aa7.65□□□□□ -1.19
NFKB1-212ENST00000600343 LOXL3P58215 753 aa7.65□□□□□ -1.19
NFKB1-212ENST00000600343 ZNF415Q09FC8 603 aa7.65□□□□□ -1.19
NFKB1-212ENST00000600343 C2orf48Q96LS8 159 aa7.65□□□□□ -1.19
NFKB1-212ENST00000600343 CYSTM1Q9H1C7 97 aa7.65□□□□□ -1.19
NFKB1-212ENST00000600343 KLK15Q9H2R5 256 aa7.65□□□□□ -1.19
NFKB1-212ENST00000600343 SAA2P0DJI9 122 aaPredicted RBP7.64□□□□□ -1.19
NFKB1-212ENST00000600343 C1orf53Q5VUE5 145 aa7.64□□□□□ -1.19
NFKB1-212ENST00000600343 Q6ZS46 218 aa7.64□□□□□ -1.19
NFKB1-212ENST00000600343 SVILO95425 2214 aa7.64□□□□□ -1.19
NFKB1-212ENST00000600343 IGLV2-18A0A075B6J9 118 aa7.64□□□□□ -1.19
NFKB1-212ENST00000600343 TRAV13-1A0A0B4J241 112 aa7.64□□□□□ -1.19
NFKB1-212ENST00000600343 MRPL33O75394 65 aaKnown RBP7.64□□□□□ -1.19
NFKB1-212ENST00000600343 CEP290O15078 2479 aa7.64□□□□□ -1.19
NFKB1-212ENST00000600343 COX6A1P12074 109 aa7.64□□□□□ -1.19
NFKB1-212ENST00000600343 TMEM190Q8WZ59 177 aa7.64□□□□□ -1.19
NFKB1-212ENST00000600343 V9GYY9 64 aa7.64□□□□□ -1.19
NFKB1-212ENST00000600343 H3BT86 120 aa7.63□□□□□ -1.19
NFKB1-212ENST00000600343 CXCL10P02778 98 aa7.63□□□□□ -1.19
NFKB1-212ENST00000600343 SCGB3A1Q96QR1 104 aa7.63□□□□□ -1.19
NFKB1-212ENST00000600343 SIT1Q9Y3P8 196 aa7.63□□□□□ -1.19
NFKB1-212ENST00000600343 FER1L5A0AVI2 2057 aa7.63□□□□□ -1.19
NFKB1-212ENST00000600343 LILRA5A6NI73 299 aa7.63□□□□□ -1.19
NFKB1-212ENST00000600343 H7C423 109 aa7.63□□□□□ -1.19
NFKB1-212ENST00000600343 ATOX1O00244 68 aa7.63□□□□□ -1.19
NFKB1-212ENST00000600343 LINC00643Q86TS7 51 aa7.63□□□□□ -1.19
NFKB1-212ENST00000600343 SAA1P0DJI8 122 aaPredicted RBP7.62□□□□□ -1.19
NFKB1-212ENST00000600343 CCL3P10147 92 aa7.62□□□□□ -1.19
NFKB1-212ENST00000600343 TMEM240Q5SV17 173 aa7.62□□□□□ -1.19
NFKB1-212ENST00000600343 RPS19BP1Q86WX3 136 aaKnown RBP7.62□□□□□ -1.19
NFKB1-212ENST00000600343 TMEM263Q8WUH6 116 aaKnown RBP7.62□□□□□ -1.19
NFKB1-212ENST00000600343 PI4KAP42356 2102 aa7.62□□□□□ -1.19
NFKB1-212ENST00000600343 ACYP1P07311 99 aa7.62□□□□□ -1.19
NFKB1-212ENST00000600343 LINC00336Q6ZUF6 198 aa7.62□□□□□ -1.19
NFKB1-212ENST00000600343 IL17RELQ6ZVW7 336 aa7.62□□□□□ -1.19
NFKB1-212ENST00000600343 SLC25A29Q8N8R3 303 aa7.62□□□□□ -1.19
NFKB1-212ENST00000600343 A0A0G2JNJ9 132 aa7.62□□□□□ -1.19
NFKB1-212ENST00000600343 IGKV1-16P04430 117 aa7.62□□□□□ -1.19
NFKB1-212ENST00000600343 PFN2P35080 140 aa7.62□□□□□ -1.19
NFKB1-212ENST00000600343 C8orf31Q8N9H6 132 aa7.62□□□□□ -1.19
NFKB1-212ENST00000600343 PRR7Q8TB68 274 aa7.62□□□□□ -1.19
NFKB1-212ENST00000600343 NDUFA4L2Q9NRX3 87 aa7.62□□□□□ -1.19
NFKB1-212ENST00000600343 Q9UFV3 132 aa7.62□□□□□ -1.19
NFKB1-212ENST00000600343 SPTY2D1-AS1A0A0U1RR47 76 aa7.62□□□□□ -1.19
NFKB1-212ENST00000600343 LYZP61626 148 aa7.62□□□□□ -1.19
NFKB1-212ENST00000600343 DEFB121Q5J5C9 76 aa7.62□□□□□ -1.19
NFKB1-212ENST00000600343 NEXN-AS1Q8NBZ9 246 aa7.62□□□□□ -1.19
NFKB1-212ENST00000600343 DKK1O94907 266 aa7.61□□□□□ -1.19
NFKB1-212ENST00000600343 DEFB119Q8N690 84 aa7.61□□□□□ -1.19
NFKB1-212ENST00000600343 EGR2P11161 476 aaPredicted RBP7.61□□□□□ -1.19
NFKB1-212ENST00000600343 C10orf105Q8TEF2 133 aa7.61□□□□□ -1.19
NFKB1-212ENST00000600343 LTBP2Q14767 1821 aa7.61□□□□□ -1.19
NFKB1-212ENST00000600343 A0A0B4J2C4 111 aa7.61□□□□□ -1.19
NFKB1-212ENST00000600343 EEF1AKMT3Q96AZ1 226 aa7.61□□□□□ -1.19
NFKB1-212ENST00000600343 GGNQ86UU5 652 aa7.6□□□□□ -1.19
NFKB1-212ENST00000600343 C17orf82Q86X59 251 aaPredicted RBP7.6□□□□□ -1.19
NFKB1-212ENST00000600343 C17orf77Q96MU5 243 aa7.6□□□□□ -1.19
NFKB1-212ENST00000600343 A0A1W2PR77 199 aa7.6□□□□□ -1.19
NFKB1-212ENST00000600343 M0R3E3 92 aa7.6□□□□□ -1.19
NFKB1-212ENST00000600343 TRIAP1O43715 76 aa7.6□□□□□ -1.19
NFKB1-212ENST00000600343 EIF4EBP3O60516 100 aaPredicted RBP7.6□□□□□ -1.19
NFKB1-212ENST00000600343 WT1-ASQ06250 92 aa7.6□□□□□ -1.19
NFKB1-212ENST00000600343 SMCR5Q8TEV8 140 aa7.6□□□□□ -1.19
NFKB1-212ENST00000600343 TMEM14CQ9P0S9 112 aa7.6□□□□□ -1.19
NFKB1-212ENST00000600343 PCNX2A6NKB5 2137 aa7.6□□□□□ -1.19
NFKB1-212ENST00000600343 E7EUB6 86 aa7.6□□□□□ -1.19
NFKB1-212ENST00000600343 PLGLAQ15195 96 aa7.6□□□□□ -1.19
NFKB1-212ENST00000600343 TRBV19A0A075B6N1 114 aa7.59□□□□□ -1.19
NFKB1-212ENST00000600343 C17orf100A8MU93 164 aa7.59□□□□□ -1.19
NFKB1-212ENST00000600343 CXCL5P42830 114 aa7.59□□□□□ -1.19
NFKB1-212ENST00000600343 NSUN5P1Q3KNT7 163 aa7.59□□□□□ -1.19
NFKB1-212ENST00000600343 SDK2Q58EX2 2172 aa7.59□□□□□ -1.19
NFKB1-212ENST00000600343 FREM1Q5H8C1 2179 aa7.59□□□□□ -1.19
NFKB1-212ENST00000600343 C5orf42Q9H799 3197 aa7.59□□□□□ -1.19
NFKB1-212ENST00000600343 LAMA2P24043 3122 aaKnown RBP7.59□□□□□ -1.19
NFKB1-212ENST00000600343 IGHV3-21A0A0B4J1V1 117 aa7.59□□□□□ -1.19
NFKB1-212ENST00000600343 TRBV30A0A0K0K1B3 111 aa7.59□□□□□ -1.19
NFKB1-212ENST00000600343 J3QQQ9 107 aa7.59□□□□□ -1.19
NFKB1-212ENST00000600343 RUSC1-AS1Q66K80 236 aa7.59□□□□□ -1.19
NFKB1-212ENST00000600343 GUSBP11Q6P575 273 aa7.59□□□□□ -1.19
NFKB1-212ENST00000600343 TMEM86BQ8N661 226 aa7.59□□□□□ -1.19
NFKB1-212ENST00000600343 SHANK2-AS3Q9BTD1 123 aa7.59□□□□□ -1.19
NFKB1-212ENST00000600343 K7ENP7 123 aa7.59□□□□□ -1.19
NFKB1-212ENST00000600343 C10orf55Q5SWW7 151 aa7.59□□□□□ -1.19
NFKB1-212ENST00000600343 TRAV26-2A0A0B4J265 109 aa7.58□□□□□ -1.2
NFKB1-212ENST00000600343 MAFAQ8NHW3 353 aaPredicted RBP7.58□□□□□ -1.2
NFKB1-212ENST00000600343 MBD3L2Q8NHZ7 208 aaPredicted RBP7.58□□□□□ -1.2
NFKB1-212ENST00000600343 ZNF318Q5VUA4 2279 aa7.58□□□□□ -1.2
NFKB1-212ENST00000600343 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.58□□□□□ -1.2
NFKB1-212ENST00000600343 CD177Q8N6Q3 437 aa7.58□□□□□ -1.2
NFKB1-212ENST00000600343 C14orf178Q8N769 122 aaPredicted RBP7.58□□□□□ -1.2
NFKB1-212ENST00000600343 KLF14Q8TD94 323 aaPredicted RBP7.58□□□□□ -1.2
NFKB1-212ENST00000600343 AGPAT4-IT1Q9H0P7 198 aa7.58□□□□□ -1.2
NFKB1-212ENST00000600343 A0A1W2PPC4 97 aa7.58□□□□□ -1.2
NFKB1-212ENST00000600343 SPRY2O43597 315 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms