RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 SCO2A0A1W2PP80 73 aa12.13□□□□□ -0.47
USHBP1-210ENST00000600286 TMEM183BQ1AE95 376 aa12.13□□□□□ -0.47
USHBP1-210ENST00000600286 ZNF705AQ6ZN79 300 aaPredicted RBP12.13□□□□□ -0.47
USHBP1-210ENST00000600286 C1orf158Q8N1D5 194 aa12.13□□□□□ -0.47
USHBP1-210ENST00000600286 LINC00479Q96M42 142 aa12.13□□□□□ -0.47
USHBP1-210ENST00000600286 KLF12Q9Y4X4 402 aa12.13□□□□□ -0.47
USHBP1-210ENST00000600286 TRBV6-1A0A0K0K1D8 114 aa12.12□□□□□ -0.47
USHBP1-210ENST00000600286 TMEM189A5PLL7 270 aa12.12□□□□□ -0.47
USHBP1-210ENST00000600286 RGS13O14921 159 aa12.12□□□□□ -0.47
USHBP1-210ENST00000600286 HTN1P15515 57 aa12.12□□□□□ -0.47
USHBP1-210ENST00000600286 TAS2R60P59551 318 aa12.12□□□□□ -0.47
USHBP1-210ENST00000600286 ZNF506Q5JVG8 444 aa12.12□□□□□ -0.47
USHBP1-210ENST00000600286 ZFAND2AQ8N6M9 145 aa12.12□□□□□ -0.47
USHBP1-210ENST00000600286 FAM210AQ96ND0 272 aa12.12□□□□□ -0.47
USHBP1-210ENST00000600286 PYGO2Q9BRQ0 406 aa12.12□□□□□ -0.47
USHBP1-210ENST00000600286 NBEAL2Q6ZNJ1 2754 aa12.11□□□□□ -0.47
USHBP1-210ENST00000600286 DNAH7Q8WXX0 4024 aa12.11□□□□□ -0.47
USHBP1-210ENST00000600286 TRAV21A0A0B4J279 112 aa12.11□□□□□ -0.47
USHBP1-210ENST00000600286 IGLV2-11P01706 119 aa12.11□□□□□ -0.47
USHBP1-210ENST00000600286 BTN1A1Q13410 526 aa12.11□□□□□ -0.47
USHBP1-210ENST00000600286 TOR2AQ5JU69 321 aa12.11□□□□□ -0.47
USHBP1-210ENST00000600286 PCNPQ8WW12 178 aaKnown RBP12.11□□□□□ -0.47
USHBP1-210ENST00000600286 C11orf52Q96A22 123 aa12.11□□□□□ -0.47
USHBP1-210ENST00000600286 TMEM250H0YL14 139 aa12.1□□□□□ -0.47
USHBP1-210ENST00000600286 KIR3DS1Q14943 382 aa12.1□□□□□ -0.47
USHBP1-210ENST00000600286 PEA15Q15121 130 aa12.1□□□□□ -0.47
USHBP1-210ENST00000600286 Q86TA4 180 aa12.1□□□□□ -0.47
USHBP1-210ENST00000600286 BAGE2Q86Y30 109 aa12.1□□□□□ -0.47
USHBP1-210ENST00000600286 C2CD4CQ8TF44 421 aa12.1□□□□□ -0.47
USHBP1-210ENST00000600286 NDUFS6O75380 124 aaKnown RBP12.09□□□□□ -0.47
USHBP1-210ENST00000600286 GCGP01275 180 aa12.09□□□□□ -0.47
USHBP1-210ENST00000600286 RPL35P42766 123 aaKnown RBP12.09□□□□□ -0.47
USHBP1-210ENST00000600286 Q6AWC8 147 aa12.09□□□□□ -0.47
USHBP1-210ENST00000600286 FAM159AQ6UWV7 190 aa12.09□□□□□ -0.47
USHBP1-210ENST00000600286 ZNF493Q6ZR52 646 aa12.09□□□□□ -0.47
USHBP1-210ENST00000600286 X6R8D5 127 aa12.09□□□□□ -0.47
USHBP1-210ENST00000600286 IGHV4-28A0A0C4DH34 117 aa12.08□□□□□ -0.48
USHBP1-210ENST00000600286 CBY3A6NI87 242 aa12.08□□□□□ -0.48
USHBP1-210ENST00000600286 FABP5P3A8MUU1 101 aa12.08□□□□□ -0.48
USHBP1-210ENST00000600286 ZNF705GA8MUZ8 300 aaPredicted RBP12.08□□□□□ -0.48
USHBP1-210ENST00000600286 ZNF324O75467 553 aaPredicted RBP12.08□□□□□ -0.48
USHBP1-210ENST00000600286 LTAP01374 205 aa12.08□□□□□ -0.48
USHBP1-210ENST00000600286 CLLU1Q5K131 121 aa12.08□□□□□ -0.48
USHBP1-210ENST00000600286 EIF4E3Q8N5X7 224 aaKnown RBP12.08□□□□□ -0.48
USHBP1-210ENST00000600286 TVP23CQ96ET8 276 aa12.08□□□□□ -0.48
USHBP1-210ENST00000600286 C8orf49Q96NF6 230 aa12.08□□□□□ -0.48
USHBP1-210ENST00000600286 SMDT1Q9H4I9 107 aa12.08□□□□□ -0.48
USHBP1-210ENST00000600286 TENM3Q9P273 2699 aa12.07□□□□□ -0.48
USHBP1-210ENST00000600286 IGHV1OR15-1A0A075B7D0 117 aa12.07□□□□□ -0.48
USHBP1-210ENST00000600286 A0A0J9YWU9 116 aa12.07□□□□□ -0.48
USHBP1-210ENST00000600286 PFN1P07737 140 aaKnown RBP12.07□□□□□ -0.48
USHBP1-210ENST00000600286 GNG4P50150 75 aa12.07□□□□□ -0.48
USHBP1-210ENST00000600286 CEBPGP53567 150 aa12.07□□□□□ -0.48
USHBP1-210ENST00000600286 TMEM183AQ8IXX5 376 aa12.07□□□□□ -0.48
USHBP1-210ENST00000600286 C16orf74Q96GX8 76 aa12.07□□□□□ -0.48
USHBP1-210ENST00000600286 KCNS1Q96KK3 526 aa12.07□□□□□ -0.48
USHBP1-210ENST00000600286 LINC00467Q9BRT7 94 aa12.07□□□□□ -0.48
USHBP1-210ENST00000600286 C11orf68Q9H3H3 251 aaKnown RBP12.07□□□□□ -0.48
USHBP1-210ENST00000600286 BIN3Q9NQY0 253 aa12.07□□□□□ -0.48
USHBP1-210ENST00000600286 TEX48A0A1B0GUV7 120 aa12.06□□□□□ -0.48
USHBP1-210ENST00000600286 RBMY1A1P0DJD3 496 aaKnown RBP12.06□□□□□ -0.48
USHBP1-210ENST00000600286 RBMY1CP0DJD4 496 aa12.06□□□□□ -0.48
USHBP1-210ENST00000600286 EMP1P54849 157 aa12.06□□□□□ -0.48
USHBP1-210ENST00000600286 IFITM2Q01629 132 aa12.06□□□□□ -0.48
USHBP1-210ENST00000600286 RBMY1FQ15415 496 aaKnown RBP12.06□□□□□ -0.48
USHBP1-210ENST00000600286 PRR9Q5T870 116 aa12.06□□□□□ -0.48
USHBP1-210ENST00000600286 Q8NAQ8 132 aa12.06□□□□□ -0.48
USHBP1-210ENST00000600286 IL17DQ8TAD2 202 aa12.06□□□□□ -0.48
USHBP1-210ENST00000600286 NAGKQ9UJ70 344 aa12.06□□□□□ -0.48
USHBP1-210ENST00000600286 SNURFLB1AK76 121 aa12.05□□□□□ -0.48
USHBP1-210ENST00000600286 ZNF674Q2M3X9 581 aa12.05□□□□□ -0.48
USHBP1-210ENST00000600286 FAM162BQ5T6X4 162 aa12.05□□□□□ -0.48
USHBP1-210ENST00000600286 TMEM263Q8WUH6 116 aaKnown RBP12.05□□□□□ -0.48
USHBP1-210ENST00000600286 SMIM12Q96EX1 92 aa12.05□□□□□ -0.48
USHBP1-210ENST00000600286 SDF2L1Q9HCN8 221 aa12.05□□□□□ -0.48
USHBP1-210ENST00000600286 TRGV11A0A075B6L2 103 aa12.04□□□□□ -0.48
USHBP1-210ENST00000600286 CXorf65A6NEN9 183 aa12.04□□□□□ -0.48
USHBP1-210ENST00000600286 DEFB4AO15263 64 aa12.04□□□□□ -0.48
USHBP1-210ENST00000600286 SPART-AS1P0CW21 52 aa12.04□□□□□ -0.48
USHBP1-210ENST00000600286 ANXA2RQ3ZCQ2 193 aa12.04□□□□□ -0.48
USHBP1-210ENST00000600286 CENPWQ5EE01 88 aa12.04□□□□□ -0.48
USHBP1-210ENST00000600286 MUC21Q5SSG8 566 aa12.04□□□□□ -0.48
USHBP1-210ENST00000600286 COX8CQ7Z4L0 72 aa12.04□□□□□ -0.48
USHBP1-210ENST00000600286 DAZAP1Q96EP5 407 aaKnown RBP12.04□□□□□ -0.48
USHBP1-210ENST00000600286 DERL1Q9BUN8 251 aa12.04□□□□□ -0.48
USHBP1-210ENST00000600286 RAB19A4D1S5 217 aa12.03□□□□□ -0.48
USHBP1-210ENST00000600286 MGST1P10620 155 aaKnown RBP12.03□□□□□ -0.48
USHBP1-210ENST00000600286 C11orf45Q8TAV5 145 aa12.03□□□□□ -0.48
USHBP1-210ENST00000600286 ZC2HC1AQ96GY0 325 aa12.03□□□□□ -0.48
USHBP1-210ENST00000600286 WWC2-AS2Q96NR7 200 aa12.03□□□□□ -0.48
USHBP1-210ENST00000600286 PARLQ9H300 379 aa12.03□□□□□ -0.48
USHBP1-210ENST00000600286 TIMM8BQ9Y5J9 83 aaPredicted RBP12.03□□□□□ -0.48
USHBP1-210ENST00000600286 ORM1P02763 201 aa12.02□□□□□ -0.49
USHBP1-210ENST00000600286 SRP19P09132 144 aaKnown RBP12.02□□□□□ -0.49
USHBP1-210ENST00000600286 AZU1P20160 251 aa12.02□□□□□ -0.49
USHBP1-210ENST00000600286 ZNF80P51504 273 aaPredicted RBP12.02□□□□□ -0.49
USHBP1-210ENST00000600286 FAM74A3Q4VXF1 159 aa12.02□□□□□ -0.49
USHBP1-210ENST00000600286 NHLRC2Q8NBF2 726 aa12.02□□□□□ -0.49
USHBP1-210ENST00000600286 LYRM9A8MSI8 78 aa12.01□□□□□ -0.49
USHBP1-210ENST00000600286 ZNF727A8MUV8 499 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms