RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 VSIG2Q96IQ7 327 aa10.95□□□□□ -0.66
VRK3-221ENST00000600284 ARPC5LQ9BPX5 153 aa10.95□□□□□ -0.66
VRK3-221ENST00000600284 MBD2Q9UBB5 411 aa10.95□□□□□ -0.66
VRK3-221ENST00000600284 MRPS16Q9Y3D3 137 aaKnown RBP10.95□□□□□ -0.66
VRK3-221ENST00000600284 A0A1W2PPQ1 181 aa10.94□□□□□ -0.66
VRK3-221ENST00000600284 DIRC3C9JPN6 131 aa10.94□□□□□ -0.66
VRK3-221ENST00000600284 SLAQ13239 276 aa10.94□□□□□ -0.66
VRK3-221ENST00000600284 ACOT6Q3I5F7 207 aaPredicted RBP10.94□□□□□ -0.66
VRK3-221ENST00000600284 PQLC2Q6ZP29 291 aa10.94□□□□□ -0.66
VRK3-221ENST00000600284 ARL6IP6Q8N6S5 226 aa10.94□□□□□ -0.66
VRK3-221ENST00000600284 TMED6Q8WW62 240 aa10.94□□□□□ -0.66
VRK3-221ENST00000600284 ST6GAL2Q96JF0 529 aa10.94□□□□□ -0.66
VRK3-221ENST00000600284 KRTAP17-1Q9BYP8 105 aa10.94□□□□□ -0.66
VRK3-221ENST00000600284 SMIM3Q9BZL3 60 aa10.94□□□□□ -0.66
VRK3-221ENST00000600284 TP53TG3Q9ULZ0 132 aa10.94□□□□□ -0.66
VRK3-221ENST00000600284 PCLOQ9Y6V0 5065 aa10.94□□□□□ -0.66
VRK3-221ENST00000600284 A0A096LPF7 62 aa10.93□□□□□ -0.66
VRK3-221ENST00000600284 TNP2Q05952 138 aa10.93□□□□□ -0.66
VRK3-221ENST00000600284 FAM74A1Q5RGS3 127 aa10.93□□□□□ -0.66
VRK3-221ENST00000600284 Q6AWC8 147 aa10.93□□□□□ -0.66
VRK3-221ENST00000600284 Q8TAT8 98 aa10.93□□□□□ -0.66
VRK3-221ENST00000600284 WFDC1Q9HC57 220 aa10.93□□□□□ -0.66
VRK3-221ENST00000600284 A0A1W2PPV4 95 aa10.92□□□□□ -0.66
VRK3-221ENST00000600284 ZNF415Q09FC8 603 aa10.92□□□□□ -0.66
VRK3-221ENST00000600284 Q6ZQT7 251 aa10.92□□□□□ -0.66
VRK3-221ENST00000600284 CMTM2Q8TAZ6 248 aa10.92□□□□□ -0.66
VRK3-221ENST00000600284 OTORQ9NRC9 128 aa10.92□□□□□ -0.66
VRK3-221ENST00000600284 RYR1P21817 5038 aa10.91□□□□□ -0.66
VRK3-221ENST00000600284 PGPA6NDG6 321 aa10.91□□□□□ -0.66
VRK3-221ENST00000600284 PRO0255Q9UI72 69 aa10.91□□□□□ -0.66
VRK3-221ENST00000600284 PAX4O43316 350 aa10.9□□□□□ -0.66
VRK3-221ENST00000600284 FAM159AQ6UWV7 190 aa10.9□□□□□ -0.66
VRK3-221ENST00000600284 HYLS1Q96M11 299 aa10.9□□□□□ -0.66
VRK3-221ENST00000600284 SPXQ9BT56 116 aa10.9□□□□□ -0.66
VRK3-221ENST00000600284 MRPL16Q9NX20 251 aaKnown RBP10.9□□□□□ -0.66
VRK3-221ENST00000600284 ALG5Q9Y673 324 aa10.9□□□□□ -0.66
VRK3-221ENST00000600284 ICOSQ9Y6W8 199 aa10.9□□□□□ -0.66
VRK3-221ENST00000600284 MUC4Q99102 2169 aa10.89□□□□□ -0.67
VRK3-221ENST00000600284 TRGV11A0A075B6L2 103 aa10.89□□□□□ -0.67
VRK3-221ENST00000600284 TDRG1Q3Y452 100 aa10.89□□□□□ -0.67
VRK3-221ENST00000600284 ZNF575Q86XF7 245 aa10.89□□□□□ -0.67
VRK3-221ENST00000600284 IQCF2Q8IXL9 164 aa10.89□□□□□ -0.67
VRK3-221ENST00000600284 OR10G4Q8NGN3 311 aa10.89□□□□□ -0.67
VRK3-221ENST00000600284 OR10G9Q8NGN4 311 aa10.89□□□□□ -0.67
VRK3-221ENST00000600284 OR10G7Q8NGN6 311 aa10.89□□□□□ -0.67
VRK3-221ENST00000600284 RASL10AQ92737 203 aa10.89□□□□□ -0.67
VRK3-221ENST00000600284 HHLA3Q9XRX5 114 aa10.89□□□□□ -0.67
VRK3-221ENST00000600284 PTTG1O95997 202 aa10.88□□□□□ -0.67
VRK3-221ENST00000600284 CRYBA4P53673 196 aa10.88□□□□□ -0.67
VRK3-221ENST00000600284 RAB2AP61019 212 aa10.88□□□□□ -0.67
VRK3-221ENST00000600284 FHL2Q14192 279 aa10.88□□□□□ -0.67
VRK3-221ENST00000600284 MUC21Q5SSG8 566 aa10.88□□□□□ -0.67
VRK3-221ENST00000600284 OR2G3Q8NGZ4 309 aa10.88□□□□□ -0.67
VRK3-221ENST00000600284 KRTAP1-5Q9BYS1 174 aa10.88□□□□□ -0.67
VRK3-221ENST00000600284 MDFICQ9P1T7 246 aa10.88□□□□□ -0.67
VRK3-221ENST00000600284 IGHV3-53P01767 116 aa10.87□□□□□ -0.67
VRK3-221ENST00000600284 MRPL23Q16540 153 aaKnown RBP10.87□□□□□ -0.67
VRK3-221ENST00000600284 AQP10Q96PS8 301 aa10.87□□□□□ -0.67
VRK3-221ENST00000600284 PSMG3Q9BT73 122 aaPredicted RBP10.87□□□□□ -0.67
VRK3-221ENST00000600284 TRAV21A0A0B4J279 112 aa10.86□□□□□ -0.67
VRK3-221ENST00000600284 SERTM2A0A1B0GWG4 89 aa10.86□□□□□ -0.67
VRK3-221ENST00000600284 C16orf90A8MZG2 172 aa10.86□□□□□ -0.67
VRK3-221ENST00000600284 SIVA1O15304 175 aa10.86□□□□□ -0.67
VRK3-221ENST00000600284 EIF3GO75821 320 aaKnown RBP eCLIP10.86□□□□□ -0.67
VRK3-221ENST00000600284 STAG3L2P0CL84 134 aa10.86□□□□□ -0.67
VRK3-221ENST00000600284 STAG3L3P0CL85 134 aa10.86□□□□□ -0.67
VRK3-221ENST00000600284 TMEM183BQ1AE95 376 aa10.86□□□□□ -0.67
VRK3-221ENST00000600284 GOLT1AQ6ZVE7 132 aa10.86□□□□□ -0.67
VRK3-221ENST00000600284 TMEM183AQ8IXX5 376 aa10.86□□□□□ -0.67
VRK3-221ENST00000600284 ASB13Q8WXK3 278 aa10.86□□□□□ -0.67
VRK3-221ENST00000600284 MED28Q9H204 178 aa10.86□□□□□ -0.67
VRK3-221ENST00000600284 TRGV4A0A0C4DH28 118 aa10.85□□□□□ -0.67
VRK3-221ENST00000600284 MBP02144 154 aa10.85□□□□□ -0.67
VRK3-221ENST00000600284 CDC34P49427 236 aaPredicted RBP10.85□□□□□ -0.67
VRK3-221ENST00000600284 SERF2P84101 59 aa10.85□□□□□ -0.67
VRK3-221ENST00000600284 NEGR1Q7Z3B1 354 aa10.85□□□□□ -0.67
VRK3-221ENST00000600284 SUN5Q8TC36 379 aa10.85□□□□□ -0.67
VRK3-221ENST00000600284 C8orf49Q96NF6 230 aa10.85□□□□□ -0.67
VRK3-221ENST00000600284 TREM1Q9NP99 234 aa10.85□□□□□ -0.67
VRK3-221ENST00000600284 RPH3ALQ9UNE2 315 aa10.85□□□□□ -0.67
VRK3-221ENST00000600284 ARL14EPLP0DKL9 152 aa10.84□□□□□ -0.67
VRK3-221ENST00000600284 LYPD5Q6UWN5 251 aa10.84□□□□□ -0.67
VRK3-221ENST00000600284 HSD17B11Q8NBQ5 300 aa10.84□□□□□ -0.67
VRK3-221ENST00000600284 KCNS1Q96KK3 526 aa10.84□□□□□ -0.67
VRK3-221ENST00000600284 HMGB3O15347 200 aaKnown RBP10.83□□□□□ -0.68
VRK3-221ENST00000600284 CDK2AP2O75956 126 aa10.83□□□□□ -0.68
VRK3-221ENST00000600284 NXPH4O95158 308 aa10.83□□□□□ -0.68
VRK3-221ENST00000600284 ORM1P02763 201 aa10.83□□□□□ -0.68
VRK3-221ENST00000600284 C5orf17Q8NAS9 161 aa10.83□□□□□ -0.68
VRK3-221ENST00000600284 RAB24Q969Q5 203 aa10.83□□□□□ -0.68
VRK3-221ENST00000600284 TVP23CQ96ET8 276 aa10.83□□□□□ -0.68
VRK3-221ENST00000600284 ZNF479Q96JC4 524 aa10.83□□□□□ -0.68
VRK3-221ENST00000600284 NDFIP1Q9BT67 221 aa10.83□□□□□ -0.68
VRK3-221ENST00000600284 NAGKQ9UJ70 344 aa10.83□□□□□ -0.68
VRK3-221ENST00000600284 TNFSF18Q9UNG2 199 aa10.83□□□□□ -0.68
VRK3-221ENST00000600284 TRAV8-1A0A0A6YYK1 113 aa10.82□□□□□ -0.68
VRK3-221ENST00000600284 TRAV4A0A0B4J268 109 aa10.82□□□□□ -0.68
VRK3-221ENST00000600284 IGHV3-16A0A0C4DH30 117 aa10.82□□□□□ -0.68
VRK3-221ENST00000600284 K7EQM0 130 aa10.82□□□□□ -0.68
VRK3-221ENST00000600284 M0R2P5 195 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms