RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 TMEM75Q8N9X5 138 aa9.83□□□□□ -0.84
VRK3-219ENST00000600137 HIST1H2BAQ96A08 127 aa9.83□□□□□ -0.84
VRK3-219ENST00000600137 LINC00467Q9BRT7 94 aa9.83□□□□□ -0.84
VRK3-219ENST00000600137 TMEM208Q9BTX3 173 aa9.83□□□□□ -0.84
VRK3-219ENST00000600137 LOC102723971A0A1B0GUV8 181 aa9.82□□□□□ -0.84
VRK3-219ENST00000600137 ZNF80P51504 273 aaPredicted RBP9.82□□□□□ -0.84
VRK3-219ENST00000600137 RNASE8Q8TDE3 154 aaKnown RBP9.82□□□□□ -0.84
VRK3-219ENST00000600137 C2CD4CQ8TF44 421 aa9.82□□□□□ -0.84
VRK3-219ENST00000600137 C8orf49Q96NF6 230 aa9.82□□□□□ -0.84
VRK3-219ENST00000600137 PPT1P50897 306 aa9.81□□□□□ -0.84
VRK3-219ENST00000600137 NANOS2P60321 138 aaKnown RBP9.81□□□□□ -0.84
VRK3-219ENST00000600137 C12orf74Q32Q52 190 aa9.81□□□□□ -0.84
VRK3-219ENST00000600137 PYGO2Q9BRQ0 406 aa9.81□□□□□ -0.84
VRK3-219ENST00000600137 TCEAL7Q9BRU2 100 aa9.81□□□□□ -0.84
VRK3-219ENST00000600137 NIPSNAP3BQ9BS92 247 aa9.81□□□□□ -0.84
VRK3-219ENST00000600137 TREM1Q9NP99 234 aa9.81□□□□□ -0.84
VRK3-219ENST00000600137 GNG13Q9P2W3 67 aa9.81□□□□□ -0.84
VRK3-219ENST00000600137 DKK2Q9UBU2 259 aa9.81□□□□□ -0.84
VRK3-219ENST00000600137 KMT2CQ8NEZ4 4911 aaKnown RBP9.8□□□□□ -0.84
VRK3-219ENST00000600137 TRBV6-1A0A0K0K1D8 114 aa9.8□□□□□ -0.84
VRK3-219ENST00000600137 TMEM189A5PLL7 270 aa9.8□□□□□ -0.84
VRK3-219ENST00000600137 FBLL1A6NHQ2 334 aaKnown RBP9.8□□□□□ -0.84
VRK3-219ENST00000600137 C11orf94C9JXX5 98 aa9.8□□□□□ -0.84
VRK3-219ENST00000600137 C3orf84H3BNL1 204 aa9.8□□□□□ -0.84
VRK3-219ENST00000600137 K7EQM0 130 aa9.8□□□□□ -0.84
VRK3-219ENST00000600137 BLOC1S1P78537 153 aa9.8□□□□□ -0.84
VRK3-219ENST00000600137 CASC10Q5T4H9 136 aa9.8□□□□□ -0.84
VRK3-219ENST00000600137 TEX261Q6UWH6 196 aa9.8□□□□□ -0.84
VRK3-219ENST00000600137 COX8CQ7Z4L0 72 aa9.8□□□□□ -0.84
VRK3-219ENST00000600137 PRNTQ86SH4 94 aa9.8□□□□□ -0.84
VRK3-219ENST00000600137 C11orf72Q8NBR9 251 aa9.8□□□□□ -0.84
VRK3-219ENST00000600137 C11orf45Q8TAV5 145 aa9.8□□□□□ -0.84
VRK3-219ENST00000600137 MANBALQ9NQG1 85 aa9.8□□□□□ -0.84
VRK3-219ENST00000600137 C11orf21Q9P2W6 132 aa9.8□□□□□ -0.84
VRK3-219ENST00000600137 TP53TG3Q9ULZ0 132 aa9.8□□□□□ -0.84
VRK3-219ENST00000600137 SCO2A0A1W2PP80 73 aa9.79□□□□□ -0.84
VRK3-219ENST00000600137 F6UZH7 168 aa9.79□□□□□ -0.84
VRK3-219ENST00000600137 HTN1P15515 57 aa9.79□□□□□ -0.84
VRK3-219ENST00000600137 CRIP1P50238 77 aa9.79□□□□□ -0.84
VRK3-219ENST00000600137 EMP1P54849 157 aa9.79□□□□□ -0.84
VRK3-219ENST00000600137 TMEM183BQ1AE95 376 aa9.79□□□□□ -0.84
VRK3-219ENST00000600137 ANXA2RQ3ZCQ2 193 aa9.79□□□□□ -0.84
VRK3-219ENST00000600137 FAM222AQ5U5X8 452 aa9.79□□□□□ -0.84
VRK3-219ENST00000600137 ZFAND6Q6FIF0 208 aa9.79□□□□□ -0.84
VRK3-219ENST00000600137 ZNF493Q6ZR52 646 aa9.79□□□□□ -0.84
VRK3-219ENST00000600137 ZNF680Q8NEM1 530 aa9.79□□□□□ -0.84
VRK3-219ENST00000600137 C11orf52Q96A22 123 aa9.79□□□□□ -0.84
VRK3-219ENST00000600137 IGHV1OR15-1A0A075B7D0 117 aa9.78□□□□□ -0.84
VRK3-219ENST00000600137 CXorf65A6NEN9 183 aa9.78□□□□□ -0.84
VRK3-219ENST00000600137 TEX46H3BTG2 121 aa9.78□□□□□ -0.84
VRK3-219ENST00000600137 TDRG1Q3Y452 100 aa9.78□□□□□ -0.84
VRK3-219ENST00000600137 Q86TA4 180 aa9.78□□□□□ -0.84
VRK3-219ENST00000600137 ZNF575Q86XF7 245 aa9.78□□□□□ -0.84
VRK3-219ENST00000600137 EIF4E3Q8N5X7 224 aaKnown RBP9.78□□□□□ -0.84
VRK3-219ENST00000600137 TMEM263Q8WUH6 116 aaKnown RBP9.78□□□□□ -0.84
VRK3-219ENST00000600137 LYSTQ99698 3801 aa9.78□□□□□ -0.84
VRK3-219ENST00000600137 SACSQ9NZJ4 4579 aa9.78□□□□□ -0.84
VRK3-219ENST00000600137 LTAP01374 205 aa9.77□□□□□ -0.85
VRK3-219ENST00000600137 SPART-AS1P0CW21 52 aa9.77□□□□□ -0.85
VRK3-219ENST00000600137 BCL2P10415 239 aa9.77□□□□□ -0.85
VRK3-219ENST00000600137 SAPCD1Q5SSQ6 148 aa9.77□□□□□ -0.85
VRK3-219ENST00000600137 Q6ZTC4 211 aa9.77□□□□□ -0.85
VRK3-219ENST00000600137 ZNF767PQ75MW2 155 aa9.77□□□□□ -0.85
VRK3-219ENST00000600137 LINC00612Q8N6U2 182 aa9.77□□□□□ -0.85
VRK3-219ENST00000600137 C16orf74Q96GX8 76 aa9.77□□□□□ -0.85
VRK3-219ENST00000600137 FMC1Q96HJ9 113 aa9.77□□□□□ -0.85
VRK3-219ENST00000600137 TXNDC17Q9BRA2 123 aa9.77□□□□□ -0.85
VRK3-219ENST00000600137 MLST8Q9BVC4 326 aa9.77□□□□□ -0.85
VRK3-219ENST00000600137 TRAV21A0A0B4J279 112 aa9.76□□□□□ -0.85
VRK3-219ENST00000600137 GCGP01275 180 aa9.76□□□□□ -0.85
VRK3-219ENST00000600137 MEF2BQ02080 365 aaPredicted RBP9.76□□□□□ -0.85
VRK3-219ENST00000600137 SMUG1Q53HV7 270 aa9.76□□□□□ -0.85
VRK3-219ENST00000600137 MUC21Q5SSG8 566 aa9.76□□□□□ -0.85
VRK3-219ENST00000600137 PHLDA1Q8WV24 401 aaPredicted RBP9.76□□□□□ -0.85
VRK3-219ENST00000600137 PCNPQ8WW12 178 aaKnown RBP9.76□□□□□ -0.85
VRK3-219ENST00000600137 DERL1Q9BUN8 251 aa9.76□□□□□ -0.85
VRK3-219ENST00000600137 VAX2Q9UIW0 290 aa9.76□□□□□ -0.85
VRK3-219ENST00000600137 ZFP30Q9Y2G7 519 aa9.76□□□□□ -0.85
VRK3-219ENST00000600137 LYRM9A8MSI8 78 aa9.75□□□□□ -0.85
VRK3-219ENST00000600137 RGS13O14921 159 aa9.75□□□□□ -0.85
VRK3-219ENST00000600137 GNRH2O43555 120 aa9.75□□□□□ -0.85
VRK3-219ENST00000600137 AKR1C3P42330 323 aa9.75□□□□□ -0.85
VRK3-219ENST00000600137 ZC2HC1AQ96GY0 325 aa9.75□□□□□ -0.85
VRK3-219ENST00000600137 NDFIP1Q9BT67 221 aa9.75□□□□□ -0.85
VRK3-219ENST00000600137 NOP10Q9NPE3 64 aaKnown RBP9.75□□□□□ -0.85
VRK3-219ENST00000600137 GSN-AS1Q9NRJ2 163 aa9.75□□□□□ -0.85
VRK3-219ENST00000600137 MDFICQ9P1T7 246 aa9.75□□□□□ -0.85
VRK3-219ENST00000600137 TIMM8BQ9Y5J9 83 aaPredicted RBP9.75□□□□□ -0.85
VRK3-219ENST00000600137 DNAH1Q9P2D7 4330 aa9.75□□□□□ -0.85
VRK3-219ENST00000600137 RBFOX3A6NFN3 312 aa9.74□□□□□ -0.85
VRK3-219ENST00000600137 CBY3A6NI87 242 aa9.74□□□□□ -0.85
VRK3-219ENST00000600137 IGLV2-8P01709 118 aa9.74□□□□□ -0.85
VRK3-219ENST00000600137 S100A9P06702 114 aaKnown RBP9.74□□□□□ -0.85
VRK3-219ENST00000600137 PFN1P07737 140 aaKnown RBP9.74□□□□□ -0.85
VRK3-219ENST00000600137 UBE2G1P62253 170 aa9.74□□□□□ -0.85
VRK3-219ENST00000600137 DAZ2Q13117 558 aaKnown RBP9.74□□□□□ -0.85
VRK3-219ENST00000600137 IBA57Q5T440 356 aaKnown RBP9.74□□□□□ -0.85
VRK3-219ENST00000600137 CEMP1Q6PRD7 247 aaPredicted RBP9.74□□□□□ -0.85
VRK3-219ENST00000600137 TMEM183AQ8IXX5 376 aa9.74□□□□□ -0.85
VRK3-219ENST00000600137 VPS13DQ5THJ4 4388 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms