RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 LINC00588Q9Y4M8 146 aa8.45□□□□□ -1.06
LIG1-217ENST00000599165 IGHV1OR15-1A0A075B7D0 117 aa8.44□□□□□ -1.06
LIG1-217ENST00000599165 TRAV26-1A0A087WT03 109 aa8.44□□□□□ -1.06
LIG1-217ENST00000599165 SPINK4O60575 86 aa8.44□□□□□ -1.06
LIG1-217ENST00000599165 NUDT3O95989 172 aa8.44□□□□□ -1.06
LIG1-217ENST00000599165 STAG3L2P0CL84 134 aa8.44□□□□□ -1.06
LIG1-217ENST00000599165 STAG3L3P0CL85 134 aa8.44□□□□□ -1.06
LIG1-217ENST00000599165 ARL14EPLP0DKL9 152 aa8.44□□□□□ -1.06
LIG1-217ENST00000599165 GNG5P63218 68 aa8.44□□□□□ -1.06
LIG1-217ENST00000599165 Q6AWC8 147 aa8.44□□□□□ -1.06
LIG1-217ENST00000599165 PQLC2Q6ZP29 291 aa8.44□□□□□ -1.06
LIG1-217ENST00000599165 ZNF680Q8NEM1 530 aa8.44□□□□□ -1.06
LIG1-217ENST00000599165 VSIG2Q96IQ7 327 aa8.44□□□□□ -1.06
LIG1-217ENST00000599165 TRAV8-1A0A0A6YYK1 113 aa8.43□□□□□ -1.06
LIG1-217ENST00000599165 A0A0J9YY99 117 aa8.43□□□□□ -1.06
LIG1-217ENST00000599165 PGPA6NDG6 321 aa8.43□□□□□ -1.06
LIG1-217ENST00000599165 CDC34P49427 236 aaPredicted RBP8.43□□□□□ -1.06
LIG1-217ENST00000599165 OR5I1Q13606 314 aa8.43□□□□□ -1.06
LIG1-217ENST00000599165 IBA57Q5T440 356 aaKnown RBP8.43□□□□□ -1.06
LIG1-217ENST00000599165 RPL7L1Q6DKI1 246 aaKnown RBP8.43□□□□□ -1.06
LIG1-217ENST00000599165 TMED6Q8WW62 240 aa8.43□□□□□ -1.06
LIG1-217ENST00000599165 ASB13Q8WXK3 278 aa8.43□□□□□ -1.06
LIG1-217ENST00000599165 RAB24Q969Q5 203 aa8.43□□□□□ -1.06
LIG1-217ENST00000599165 HYLS1Q96M11 299 aa8.43□□□□□ -1.06
LIG1-217ENST00000599165 A0A1W2PPV4 95 aa8.42□□□□□ -1.06
LIG1-217ENST00000599165 CSN1S1P47710 185 aa8.42□□□□□ -1.06
LIG1-217ENST00000599165 FAM3BP58499 235 aaPredicted RBP8.42□□□□□ -1.06
LIG1-217ENST00000599165 ZNF726P1Q15940 193 aa8.42□□□□□ -1.06
LIG1-217ENST00000599165 RGS21Q2M5E4 152 aa8.42□□□□□ -1.06
LIG1-217ENST00000599165 MUC21Q5SSG8 566 aa8.42□□□□□ -1.06
LIG1-217ENST00000599165 LINC00336Q6ZUF6 198 aa8.42□□□□□ -1.06
LIG1-217ENST00000599165 GOLT1AQ6ZVE7 132 aa8.42□□□□□ -1.06
LIG1-217ENST00000599165 OR2T35Q8NGX2 323 aa8.42□□□□□ -1.06
LIG1-217ENST00000599165 RXFP4Q8TDU9 374 aa8.42□□□□□ -1.06
LIG1-217ENST00000599165 MRPL16Q9NX20 251 aaKnown RBP8.42□□□□□ -1.06
LIG1-217ENST00000599165 MDFICQ9P1T7 246 aa8.42□□□□□ -1.06
LIG1-217ENST00000599165 LENEPQ9Y5L5 61 aa8.42□□□□□ -1.06
LIG1-217ENST00000599165 FXYD6-FXYD2A0A087WZ82 144 aa8.41□□□□□ -1.06
LIG1-217ENST00000599165 TRGV1A0A0A0MS02 117 aa8.41□□□□□ -1.06
LIG1-217ENST00000599165 H3BNG1 76 aa8.41□□□□□ -1.06
LIG1-217ENST00000599165 RGS13O14921 159 aa8.41□□□□□ -1.06
LIG1-217ENST00000599165 GCHFRP30047 84 aa8.41□□□□□ -1.06
LIG1-217ENST00000599165 ARL6IP6Q8N6S5 226 aa8.41□□□□□ -1.06
LIG1-217ENST00000599165 GNPNAT1Q96EK6 184 aaPredicted RBP8.41□□□□□ -1.06
LIG1-217ENST00000599165 KRTAP1-5Q9BYS1 174 aa8.41□□□□□ -1.06
LIG1-217ENST00000599165 CYTL1Q9NRR1 136 aa8.41□□□□□ -1.06
LIG1-217ENST00000599165 RPH3ALQ9UNE2 315 aa8.41□□□□□ -1.06
LIG1-217ENST00000599165 A0A096LPF7 62 aa8.4□□□□□ -1.06
LIG1-217ENST00000599165 PRSS29PA6NIE9 313 aa8.4□□□□□ -1.06
LIG1-217ENST00000599165 GGTLC3B5MD39 225 aa8.4□□□□□ -1.06
LIG1-217ENST00000599165 F6UZH7 168 aa8.4□□□□□ -1.06
LIG1-217ENST00000599165 SMLR1H3BR10 107 aa8.4□□□□□ -1.06
LIG1-217ENST00000599165 IGLV2-11P01706 119 aa8.4□□□□□ -1.06
LIG1-217ENST00000599165 SERF2P84101 59 aa8.4□□□□□ -1.06
LIG1-217ENST00000599165 ESRGQ1W209 222 aa8.4□□□□□ -1.06
LIG1-217ENST00000599165 TDRG1Q3Y452 100 aa8.4□□□□□ -1.06
LIG1-217ENST00000599165 ST6GAL2Q96JF0 529 aa8.4□□□□□ -1.06
LIG1-217ENST00000599165 SGK494Q96LW2 274 aa8.4□□□□□ -1.06
LIG1-217ENST00000599165 LRP1BQ9NZR2 4599 aa8.39□□□□□ -1.07
LIG1-217ENST00000599165 RYR1P21817 5038 aa8.39□□□□□ -1.07
LIG1-217ENST00000599165 NBDYA0A0U1RRE5 68 aa8.39□□□□□ -1.07
LIG1-217ENST00000599165 TCRAP04437 139 aa8.39□□□□□ -1.07
LIG1-217ENST00000599165 ZNF80P51504 273 aaPredicted RBP8.39□□□□□ -1.07
LIG1-217ENST00000599165 CMTM2Q8TAZ6 248 aa8.39□□□□□ -1.07
LIG1-217ENST00000599165 ATG101Q9BSB4 218 aa8.39□□□□□ -1.07
LIG1-217ENST00000599165 C11orf21Q9P2W6 132 aa8.39□□□□□ -1.07
LIG1-217ENST00000599165 TRGV2A0A075B6R0 118 aa8.38□□□□□ -1.07
LIG1-217ENST00000599165 GNRH2O43555 120 aa8.38□□□□□ -1.07
LIG1-217ENST00000599165 IGHV3-53P01767 116 aa8.38□□□□□ -1.07
LIG1-217ENST00000599165 CCL18P55774 89 aa8.38□□□□□ -1.07
LIG1-217ENST00000599165 ZNF415Q09FC8 603 aa8.38□□□□□ -1.07
LIG1-217ENST00000599165 FHL2Q14192 279 aa8.38□□□□□ -1.07
LIG1-217ENST00000599165 TMEM183BQ1AE95 376 aa8.38□□□□□ -1.07
LIG1-217ENST00000599165 TMEM183AQ8IXX5 376 aa8.38□□□□□ -1.07
LIG1-217ENST00000599165 INO80EQ8NBZ0 244 aaPredicted RBP8.38□□□□□ -1.07
LIG1-217ENST00000599165 C8orf49Q96NF6 230 aa8.38□□□□□ -1.07
LIG1-217ENST00000599165 ARPC5LQ9BPX5 153 aa8.38□□□□□ -1.07
LIG1-217ENST00000599165 UPK3BQ9BT76 320 aa8.38□□□□□ -1.07
LIG1-217ENST00000599165 DNAH5Q8TE73 4624 aa8.38□□□□□ -1.07
LIG1-217ENST00000599165 IGHV3-16A0A0C4DH30 117 aa8.37□□□□□ -1.07
LIG1-217ENST00000599165 ARPC5O15511 151 aa8.37□□□□□ -1.07
LIG1-217ENST00000599165 MBP02144 154 aa8.37□□□□□ -1.07
LIG1-217ENST00000599165 FAM74A1Q5RGS3 127 aa8.37□□□□□ -1.07
LIG1-217ENST00000599165 C5orf17Q8NAS9 161 aa8.37□□□□□ -1.07
LIG1-217ENST00000599165 OR11H4Q8NGC9 324 aa8.37□□□□□ -1.07
LIG1-217ENST00000599165 ACTR3CQ9C0K3 210 aaPredicted RBP8.37□□□□□ -1.07
LIG1-217ENST00000599165 TREM1Q9NP99 234 aa8.37□□□□□ -1.07
LIG1-217ENST00000599165 CXorf1O96002 111 aa8.36□□□□□ -1.07
LIG1-217ENST00000599165 TYMSP04818 313 aa8.36□□□□□ -1.07
LIG1-217ENST00000599165 SFTA3P0C7M3 94 aa8.36□□□□□ -1.07
LIG1-217ENST00000599165 CRYBA4P53673 196 aa8.36□□□□□ -1.07
LIG1-217ENST00000599165 SUMO1P63165 101 aaKnown RBP8.36□□□□□ -1.07
LIG1-217ENST00000599165 C1orf134Q5TEV5 83 aa8.36□□□□□ -1.07
LIG1-217ENST00000599165 RASL10AQ92737 203 aa8.36□□□□□ -1.07
LIG1-217ENST00000599165 ZNF479Q96JC4 524 aa8.36□□□□□ -1.07
LIG1-217ENST00000599165 Q9H8V8 135 aa8.36□□□□□ -1.07
LIG1-217ENST00000599165 TMEM167BQ9NRX6 74 aa8.36□□□□□ -1.07
LIG1-217ENST00000599165 NAGKQ9UJ70 344 aa8.36□□□□□ -1.07
LIG1-217ENST00000599165 EPDR1Q9UM22 224 aa8.36□□□□□ -1.07
LIG1-217ENST00000599165 PSG8Q9UQ74 426 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms