RNA–Protein interactions for RNA: ENST00000599082.1

SOX2-OT-231, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 839 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-231ENST00000599082 SMPXQ9UHP9 88 aa0.58□□□□□ -2.32
SOX2-OT-231ENST00000599082 MEGF8Q7Z7M0 2845 aa0.57□□□□□ -2.32
SOX2-OT-231ENST00000599082 TNCP24821 2201 aa0.57□□□□□ -2.32
SOX2-OT-231ENST00000599082 PBRM1Q86U86 1689 aa0.57□□□□□ -2.32
SOX2-OT-231ENST00000599082 TRBV7-6A0A0J9YX20 115 aa0.57□□□□□ -2.32
SOX2-OT-231ENST00000599082 H3BMG7 143 aa0.57□□□□□ -2.32
SOX2-OT-231ENST00000599082 FAM107AO95990 144 aa0.57□□□□□ -2.32
SOX2-OT-231ENST00000599082 GYPBP06028 91 aa0.57□□□□□ -2.32
SOX2-OT-231ENST00000599082 FABP1P07148 127 aa0.57□□□□□ -2.32
SOX2-OT-231ENST00000599082 POLR2HP52434 150 aaKnown RBP0.57□□□□□ -2.32
SOX2-OT-231ENST00000599082 SNRPD3P62318 126 aaKnown RBP0.57□□□□□ -2.32
SOX2-OT-231ENST00000599082 C10orf99Q6UWK7 81 aa0.57□□□□□ -2.32
SOX2-OT-231ENST00000599082 MPC1Q9Y5U8 109 aa0.57□□□□□ -2.32
SOX2-OT-231ENST00000599082 LOC107986453A0A1B0GWG9 222 aa0.56□□□□□ -2.32
SOX2-OT-231ENST00000599082 A0A1W2PPB8 328 aa0.56□□□□□ -2.32
SOX2-OT-231ENST00000599082 A0A1W2PRS3 328 aa0.56□□□□□ -2.32
SOX2-OT-231ENST00000599082 ARL5CA6NH57 179 aa0.56□□□□□ -2.32
SOX2-OT-231ENST00000599082 BBIP1A8MTZ0 92 aa0.56□□□□□ -2.32
SOX2-OT-231ENST00000599082 KIR3DP1A8MWS1 328 aa0.56□□□□□ -2.32
SOX2-OT-231ENST00000599082 S100A5P33763 92 aa0.56□□□□□ -2.32
SOX2-OT-231ENST00000599082 TRAPPC2LQ9UL33 140 aa0.56□□□□□ -2.32
SOX2-OT-231ENST00000599082 MYH1P12882 1939 aa0.56□□□□□ -2.32
SOX2-OT-231ENST00000599082 MUC5ACP98088 5654 aa0.55□□□□□ -2.32
SOX2-OT-231ENST00000599082 RPL7P18124 248 aaKnown RBP0.55□□□□□ -2.32
SOX2-OT-231ENST00000599082 C3orf62Q6ZUJ4 267 aa0.55□□□□□ -2.32
SOX2-OT-231ENST00000599082 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.54□□□□□ -2.32
SOX2-OT-231ENST00000599082 A0A1B0GV72 72 aa0.54□□□□□ -2.32
SOX2-OT-231ENST00000599082 LY6G6CO95867 125 aa0.54□□□□□ -2.32
SOX2-OT-231ENST00000599082 SLC25A4P12235 298 aa0.54□□□□□ -2.32
SOX2-OT-231ENST00000599082 CRYGSP22914 178 aa0.54□□□□□ -2.32
SOX2-OT-231ENST00000599082 SRP9P49458 86 aaKnown RBP0.54□□□□□ -2.32
SOX2-OT-231ENST00000599082 DNAJB13P59910 316 aa0.54□□□□□ -2.32
SOX2-OT-231ENST00000599082 CCSMST1Q4G0I0 132 aa0.54□□□□□ -2.32
SOX2-OT-231ENST00000599082 GLYATL3Q5SZD4 288 aa0.54□□□□□ -2.32
SOX2-OT-231ENST00000599082 OR51A4Q8NGJ6 313 aa0.54□□□□□ -2.32
SOX2-OT-231ENST00000599082 CBLN4Q9NTU7 201 aa0.54□□□□□ -2.32
SOX2-OT-231ENST00000599082 V9GYQ6 96 aa0.54□□□□□ -2.32
SOX2-OT-231ENST00000599082 BDP1A6H8Y1 2624 aa0.54□□□□□ -2.32
SOX2-OT-231ENST00000599082 LOC107984640A0A0U1RRK4 108 aa0.53□□□□□ -2.32
SOX2-OT-231ENST00000599082 CENPHQ9H3R5 247 aa0.53□□□□□ -2.32
SOX2-OT-231ENST00000599082 EVI2AP22794 236 aa0.52□□□□□ -2.33
SOX2-OT-231ENST00000599082 LINC00208Q96KT6 92 aa0.52□□□□□ -2.33
SOX2-OT-231ENST00000599082 MDN1Q9NU22 5596 aa0.52□□□□□ -2.33
SOX2-OT-231ENST00000599082 BLCAPP62952 87 aa0.51□□□□□ -2.33
SOX2-OT-231ENST00000599082 DEFB132Q7Z7B7 95 aa0.51□□□□□ -2.33
SOX2-OT-231ENST00000599082 C19orf12Q9NSK7 152 aa0.51□□□□□ -2.33
SOX2-OT-231ENST00000599082 MRPL35Q9NZE8 188 aaKnown RBP0.51□□□□□ -2.33
SOX2-OT-231ENST00000599082 FAT4Q6V0I7 4981 aa0.51□□□□□ -2.33
SOX2-OT-231ENST00000599082 A2MP01023 1474 aa0.5□□□□□ -2.33
SOX2-OT-231ENST00000599082 NBDYA0A0U1RRE5 68 aa0.5□□□□□ -2.33
SOX2-OT-231ENST00000599082 PRORSD1PA6NEY8 169 aa0.5□□□□□ -2.33
SOX2-OT-231ENST00000599082 EDF1O60869 148 aaKnown RBP0.5□□□□□ -2.33
SOX2-OT-231ENST00000599082 FXYD3Q14802 87 aa0.5□□□□□ -2.33
SOX2-OT-231ENST00000599082 MRPL36Q9P0J6 103 aaKnown RBP0.5□□□□□ -2.33
SOX2-OT-231ENST00000599082 IFITM5A6NNB3 132 aa0.49□□□□□ -2.33
SOX2-OT-231ENST00000599082 M0QZK8 103 aa0.49□□□□□ -2.33
SOX2-OT-231ENST00000599082 IGF2P01344 180 aa0.49□□□□□ -2.33
SOX2-OT-231ENST00000599082 IFNA21P01568 189 aa0.49□□□□□ -2.33
SOX2-OT-231ENST00000599082 GTF2A1P52655 376 aaPredicted RBP0.49□□□□□ -2.33
SOX2-OT-231ENST00000599082 TFAMQ00059 246 aaKnown RBP0.49□□□□□ -2.33
SOX2-OT-231ENST00000599082 TOMM20LQ6UXN7 152 aa0.49□□□□□ -2.33
SOX2-OT-231ENST00000599082 OR9Q1Q8NGQ5 310 aa0.49□□□□□ -2.33
SOX2-OT-231ENST00000599082 NAT14Q8WUY8 206 aa0.49□□□□□ -2.33
SOX2-OT-231ENST00000599082 COMMD3Q9UBI1 195 aa0.49□□□□□ -2.33
SOX2-OT-231ENST00000599082 AFDNP55196 1824 aaKnown RBP0.49□□□□□ -2.33
SOX2-OT-231ENST00000599082 CDC42EP2O14613 210 aa0.48□□□□□ -2.33
SOX2-OT-231ENST00000599082 ESPL1Q14674 2120 aa0.48□□□□□ -2.33
SOX2-OT-231ENST00000599082 SPINK13Q1W4C9 94 aa0.48□□□□□ -2.33
SOX2-OT-231ENST00000599082 OR8J3Q8NGG0 315 aa0.48□□□□□ -2.33
SOX2-OT-231ENST00000599082 TSKUQ8WUA8 353 aa0.48□□□□□ -2.33
SOX2-OT-231ENST00000599082 BRK1Q8WUW1 75 aa0.48□□□□□ -2.33
SOX2-OT-231ENST00000599082 GPR98Q8WXG9 6306 aa0.48□□□□□ -2.33
SOX2-OT-231ENST00000599082 LOC101927531A0A1B0GV80 90 aa0.47□□□□□ -2.33
SOX2-OT-231ENST00000599082 TMEM30CPA0ZSE6 113 aa0.47□□□□□ -2.33
SOX2-OT-231ENST00000599082 TMEM189A5PLL7 270 aa0.47□□□□□ -2.33
SOX2-OT-231ENST00000599082 HBDP02042 147 aa0.47□□□□□ -2.33
SOX2-OT-231ENST00000599082 ETV6P41212 452 aa0.47□□□□□ -2.33
SOX2-OT-231ENST00000599082 ZNF56Q15929 161 aa0.47□□□□□ -2.33
SOX2-OT-231ENST00000599082 TMEM128Q5BJH2 165 aa0.47□□□□□ -2.33
SOX2-OT-231ENST00000599082 C5orf56Q8N8D9 126 aa0.47□□□□□ -2.33
SOX2-OT-231ENST00000599082 CCDC115Q96NT0 180 aa0.47□□□□□ -2.33
SOX2-OT-231ENST00000599082 RPL22P35268 128 aaKnown RBP0.46□□□□□ -2.34
SOX2-OT-231ENST00000599082 RPL37P61927 97 aaKnown RBP0.46□□□□□ -2.34
SOX2-OT-231ENST00000599082 SAMD13Q5VXD3 122 aa0.46□□□□□ -2.34
SOX2-OT-231ENST00000599082 OR5A2Q8NGI9 324 aa0.46□□□□□ -2.34
SOX2-OT-231ENST00000599082 SMIM7Q9BQ49 75 aa0.46□□□□□ -2.34
SOX2-OT-231ENST00000599082 NEFHP12036 1026 aa0.45□□□□□ -2.34
SOX2-OT-231ENST00000599082 LYPD5Q6UWN5 251 aa0.45□□□□□ -2.34
SOX2-OT-231ENST00000599082 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.45□□□□□ -2.34
SOX2-OT-231ENST00000599082 SPAG17Q6Q759 2223 aa0.45□□□□□ -2.34
SOX2-OT-231ENST00000599082 MAST4O15021 2626 aa0.45□□□□□ -2.34
SOX2-OT-231ENST00000599082 XIRP1Q702N8 1843 aaKnown RBP0.44□□□□□ -2.34
SOX2-OT-231ENST00000599082 HIGD1CA8MV81 97 aa0.44□□□□□ -2.34
SOX2-OT-231ENST00000599082 PGRMC1O00264 195 aaKnown RBP0.44□□□□□ -2.34
SOX2-OT-231ENST00000599082 IGKCP01834 107 aa0.44□□□□□ -2.34
SOX2-OT-231ENST00000599082 LSM3P62310 102 aaKnown RBP0.44□□□□□ -2.34
SOX2-OT-231ENST00000599082 SYNE1Q8NF91 8797 aaKnown RBP0.44□□□□□ -2.34
SOX2-OT-231ENST00000599082 TPST1O60507 370 aa0.43□□□□□ -2.34
SOX2-OT-231ENST00000599082 RHOHQ15669 191 aa0.43□□□□□ -2.34
SOX2-OT-231ENST00000599082 OTOSQ8NHW6 89 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms