RNA–Protein interactions for RNA: ENST00000598886.1

SMG9-208, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 681 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-208ENST00000598886 FHL2Q14192 279 aa10.7□□□□□ -0.7
SMG9-208ENST00000598886 WDR61Q9GZS3 305 aaKnown RBP10.7□□□□□ -0.7
SMG9-208ENST00000598886 MED28Q9H204 178 aa10.7□□□□□ -0.7
SMG9-208ENST00000598886 OR51M1Q9H341 326 aa10.7□□□□□ -0.7
SMG9-208ENST00000598886 AAMDCQ9H7C9 122 aa10.7□□□□□ -0.7
SMG9-208ENST00000598886 MRPL16Q9NX20 251 aaKnown RBP10.7□□□□□ -0.7
SMG9-208ENST00000598886 OR10J4P0C629 311 aa10.69□□□□□ -0.7
SMG9-208ENST00000598886 CRYBA4P53673 196 aa10.69□□□□□ -0.7
SMG9-208ENST00000598886 TMEM78Q5T7P6 136 aa10.69□□□□□ -0.7
SMG9-208ENST00000598886 MRPL32Q9BYC8 188 aaKnown RBP10.69□□□□□ -0.7
SMG9-208ENST00000598886 NMES1Q9C002 83 aa10.69□□□□□ -0.7
SMG9-208ENST00000598886 VPS13BQ7Z7G8 4022 aa10.68□□□□□ -0.7
SMG9-208ENST00000598886 HERC1Q15751 4861 aa10.68□□□□□ -0.7
SMG9-208ENST00000598886 E5RGE8 158 aa10.68□□□□□ -0.7
SMG9-208ENST00000598886 SIVA1O15304 175 aa10.68□□□□□ -0.7
SMG9-208ENST00000598886 NXPH4O95158 308 aa10.68□□□□□ -0.7
SMG9-208ENST00000598886 ZNF138P52744 262 aa10.68□□□□□ -0.7
SMG9-208ENST00000598886 ZNF266Q14584 549 aa10.68□□□□□ -0.7
SMG9-208ENST00000598886 PRO0255Q9UI72 69 aa10.68□□□□□ -0.7
SMG9-208ENST00000598886 ICOSQ9Y6W8 199 aa10.68□□□□□ -0.7
SMG9-208ENST00000598886 RBAKDNA6NC62 111 aa10.67□□□□□ -0.7
SMG9-208ENST00000598886 RGS13O14921 159 aa10.67□□□□□ -0.7
SMG9-208ENST00000598886 PAX4O43316 350 aa10.67□□□□□ -0.7
SMG9-208ENST00000598886 SSNA1O43805 119 aa10.67□□□□□ -0.7
SMG9-208ENST00000598886 IGHV3-53P01767 116 aa10.67□□□□□ -0.7
SMG9-208ENST00000598886 H2BFSP57053 126 aa10.67□□□□□ -0.7
SMG9-208ENST00000598886 LYPD5Q6UWN5 251 aa10.67□□□□□ -0.7
SMG9-208ENST00000598886 TCTE3Q8IZS6 198 aa10.67□□□□□ -0.7
SMG9-208ENST00000598886 PAXXQ9BUH6 204 aa10.67□□□□□ -0.7
SMG9-208ENST00000598886 SCRT2Q9NQ03 307 aa10.67□□□□□ -0.7
SMG9-208ENST00000598886 MDFICQ9P1T7 246 aa10.67□□□□□ -0.7
SMG9-208ENST00000598886 Q6AWC8 147 aa10.66□□□□□ -0.7
SMG9-208ENST00000598886 ASB13Q8WXK3 278 aa10.66□□□□□ -0.7
SMG9-208ENST00000598886 SLC25A31Q9H0C2 315 aa10.66□□□□□ -0.7
SMG9-208ENST00000598886 TNFRSF18Q9Y5U5 241 aa10.66□□□□□ -0.7
SMG9-208ENST00000598886 FAT1Q14517 4588 aa10.65□□□□□ -0.7
SMG9-208ENST00000598886 ZNF415Q09FC8 603 aa10.65□□□□□ -0.7
SMG9-208ENST00000598886 LRRC37A5PQ49AS3 106 aa10.65□□□□□ -0.7
SMG9-208ENST00000598886 IQCF2Q8IXL9 164 aa10.65□□□□□ -0.7
SMG9-208ENST00000598886 LYPD1Q8N2G4 141 aa10.65□□□□□ -0.7
SMG9-208ENST00000598886 C8orf49Q96NF6 230 aa10.65□□□□□ -0.7
SMG9-208ENST00000598886 KCNIP2Q9NS61 270 aa10.65□□□□□ -0.7
SMG9-208ENST00000598886 HHLA3Q9XRX5 114 aa10.65□□□□□ -0.7
SMG9-208ENST00000598886 FUSP35637 526 aaKnown RBP eCLIP10.64□□□□□ -0.71
SMG9-208ENST00000598886 OR10G4Q8NGN3 311 aa10.64□□□□□ -0.71
SMG9-208ENST00000598886 RASL10AQ92737 203 aa10.64□□□□□ -0.71
SMG9-208ENST00000598886 ZNF479Q96JC4 524 aa10.64□□□□□ -0.71
SMG9-208ENST00000598886 ATP5SQ99766 215 aa10.64□□□□□ -0.71
SMG9-208ENST00000598886 ARPC5LQ9BPX5 153 aa10.64□□□□□ -0.71
SMG9-208ENST00000598886 DIRC3C9JPN6 131 aa10.63□□□□□ -0.71
SMG9-208ENST00000598886 OR7C2O60412 319 aa10.63□□□□□ -0.71
SMG9-208ENST00000598886 GIPP09681 153 aaPredicted RBP10.63□□□□□ -0.71
SMG9-208ENST00000598886 SFTA3P0C7M3 94 aa10.63□□□□□ -0.71
SMG9-208ENST00000598886 RANP62826 216 aaKnown RBP10.63□□□□□ -0.71
SMG9-208ENST00000598886 UBE2L3P68036 154 aaKnown RBP10.63□□□□□ -0.71
SMG9-208ENST00000598886 SLAQ13239 276 aa10.63□□□□□ -0.71
SMG9-208ENST00000598886 TDRG1Q3Y452 100 aa10.63□□□□□ -0.71
SMG9-208ENST00000598886 MUC21Q5SSG8 566 aa10.63□□□□□ -0.71
SMG9-208ENST00000598886 TMED6Q8WW62 240 aa10.63□□□□□ -0.71
SMG9-208ENST00000598886 LENEPQ9Y5L5 61 aa10.63□□□□□ -0.71
SMG9-208ENST00000598886 K7EQD1 137 aa10.62□□□□□ -0.71
SMG9-208ENST00000598886 EIF3GO75821 320 aaKnown RBP eCLIP10.62□□□□□ -0.71
SMG9-208ENST00000598886 DNAH10OSP0CZ25 163 aa10.62□□□□□ -0.71
SMG9-208ENST00000598886 XGP55808 180 aa10.62□□□□□ -0.71
SMG9-208ENST00000598886 MRPL23Q16540 153 aaKnown RBP10.62□□□□□ -0.71
SMG9-208ENST00000598886 NEGR1Q7Z3B1 354 aa10.62□□□□□ -0.71
SMG9-208ENST00000598886 WFDC10BQ8IUB3 73 aa10.62□□□□□ -0.71
SMG9-208ENST00000598886 PPP1R1CQ8WVI7 109 aa10.62□□□□□ -0.71
SMG9-208ENST00000598886 HSPB11Q9Y547 144 aa10.62□□□□□ -0.71
SMG9-208ENST00000598886 CYCSP99999 105 aaKnown RBP10.61□□□□□ -0.71
SMG9-208ENST00000598886 ZFP69Q49AA0 526 aa10.61□□□□□ -0.71
SMG9-208ENST00000598886 TVP23CQ96ET8 276 aa10.61□□□□□ -0.71
SMG9-208ENST00000598886 SRRM2Q9UQ35 2752 aaKnown RBP10.61□□□□□ -0.71
SMG9-208ENST00000598886 MYCBP2O75592 4640 aa10.6□□□□□ -0.71
SMG9-208ENST00000598886 A0A087WTM6 91 aa10.6□□□□□ -0.71
SMG9-208ENST00000598886 C17orf112F2Z3M2 114 aa10.6□□□□□ -0.71
SMG9-208ENST00000598886 MPC2O95563 127 aa10.6□□□□□ -0.71
SMG9-208ENST00000598886 C1QBP02746 253 aa10.6□□□□□ -0.71
SMG9-208ENST00000598886 TMEM183BQ1AE95 376 aa10.6□□□□□ -0.71
SMG9-208ENST00000598886 KHDC3LQ587J8 217 aa10.6□□□□□ -0.71
SMG9-208ENST00000598886 FFAR4Q5NUL3 377 aa10.6□□□□□ -0.71
SMG9-208ENST00000598886 CDPF1Q6NVV7 123 aa10.6□□□□□ -0.71
SMG9-208ENST00000598886 TMEM183AQ8IXX5 376 aa10.6□□□□□ -0.71
SMG9-208ENST00000598886 SPXQ9BT56 116 aa10.6□□□□□ -0.71
SMG9-208ENST00000598886 WFDC1Q9HC57 220 aa10.6□□□□□ -0.71
SMG9-208ENST00000598886 PGPEP1Q9NXJ5 209 aa10.6□□□□□ -0.71
SMG9-208ENST00000598886 IGHV3-16A0A0C4DH30 117 aa10.59□□□□□ -0.71
SMG9-208ENST00000598886 CSN1S1P47710 185 aa10.59□□□□□ -0.71
SMG9-208ENST00000598886 ERVFC1-1P60608 527 aa10.59□□□□□ -0.71
SMG9-208ENST00000598886 TRGV11A0A075B6L2 103 aa10.58□□□□□ -0.72
SMG9-208ENST00000598886 TRAV4A0A0B4J268 109 aa10.58□□□□□ -0.72
SMG9-208ENST00000598886 TRGV4A0A0C4DH28 118 aa10.58□□□□□ -0.72
SMG9-208ENST00000598886 GYPEP15421 78 aa10.58□□□□□ -0.72
SMG9-208ENST00000598886 KRTAP10-1P60331 282 aa10.58□□□□□ -0.72
SMG9-208ENST00000598886 OTORQ9NRC9 128 aa10.58□□□□□ -0.72
SMG9-208ENST00000598886 LY96Q9Y6Y9 160 aa10.58□□□□□ -0.72
SMG9-208ENST00000598886 LOC100131303A0A0U1RQF7 123 aa10.57□□□□□ -0.72
SMG9-208ENST00000598886 K7EP13 123 aa10.57□□□□□ -0.72
SMG9-208ENST00000598886 GNRH2O43555 120 aa10.57□□□□□ -0.72
SMG9-208ENST00000598886 RPL12P30050 165 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms