RNA–Protein interactions for RNA: ENST00000598772.1

HERC3-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-213ENST00000598772 KRTAP19-2Q3LHN2 52 aa2.53□□□□□ -2
HERC3-213ENST00000598772 PRR9Q5T870 116 aa2.53□□□□□ -2
HERC3-213ENST00000598772 FAM159AQ6UWV7 190 aa2.53□□□□□ -2
HERC3-213ENST00000598772 LCN15Q6UWW0 184 aa2.53□□□□□ -2
HERC3-213ENST00000598772 TMEM182Q6ZP80 229 aaPredicted RBP2.53□□□□□ -2
HERC3-213ENST00000598772 PHF5AQ7RTV0 110 aaKnown RBP2.53□□□□□ -2
HERC3-213ENST00000598772 HOGA1Q86XE5 327 aa2.53□□□□□ -2
HERC3-213ENST00000598772 LINC00269Q8N2A0 174 aa2.53□□□□□ -2
HERC3-213ENST00000598772 OR5AP2Q8NGF4 316 aa2.53□□□□□ -2
HERC3-213ENST00000598772 MARCH1Q8TCQ1 289 aa2.53□□□□□ -2
HERC3-213ENST00000598772 ODF3Q96PU9 254 aa2.53□□□□□ -2
HERC3-213ENST00000598772 TRGV9Q99603 122 aa2.53□□□□□ -2
HERC3-213ENST00000598772 SHANK2-AS3Q9BTD1 123 aa2.53□□□□□ -2
HERC3-213ENST00000598772 AGPAT4-IT1Q9H0P7 198 aa2.53□□□□□ -2
HERC3-213ENST00000598772 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.53□□□□□ -2
HERC3-213ENST00000598772 DIMT1Q9UNQ2 313 aaKnown RBP2.53□□□□□ -2
HERC3-213ENST00000598772 KMT2DO14686 5537 aa2.53□□□□□ -2
HERC3-213ENST00000598772 TRGV11A0A075B6L2 103 aa2.52□□□□□ -2.01
HERC3-213ENST00000598772 TRAV18A0A075B6X5 111 aa2.52□□□□□ -2.01
HERC3-213ENST00000598772 A0A087X0K7 114 aa2.52□□□□□ -2.01
HERC3-213ENST00000598772 KLLNB2CW77 178 aa2.52□□□□□ -2.01
HERC3-213ENST00000598772 HMGB1P1B2RPK0 211 aaPredicted RBP2.52□□□□□ -2.01
HERC3-213ENST00000598772 H3BRN7 92 aa2.52□□□□□ -2.01
HERC3-213ENST00000598772 SLC17A3O00476 420 aa2.52□□□□□ -2.01
HERC3-213ENST00000598772 TSHBP01222 138 aa2.52□□□□□ -2.01
HERC3-213ENST00000598772 IL5P05113 134 aa2.52□□□□□ -2.01
HERC3-213ENST00000598772 GPX4P36969 197 aaPredicted RBP2.52□□□□□ -2.01
HERC3-213ENST00000598772 AMTP48728 403 aa2.52□□□□□ -2.01
HERC3-213ENST00000598772 INPP1P49441 399 aa2.52□□□□□ -2.01
HERC3-213ENST00000598772 SP6Q3SY56 376 aa2.52□□□□□ -2.01
HERC3-213ENST00000598772 MPV17L2Q567V2 206 aa2.52□□□□□ -2.01
HERC3-213ENST00000598772 CFAP126Q5VTH2 177 aa2.52□□□□□ -2.01
HERC3-213ENST00000598772 DHRS11Q6UWP2 260 aa2.52□□□□□ -2.01
HERC3-213ENST00000598772 OR13C8Q8NGS7 320 aa2.52□□□□□ -2.01
HERC3-213ENST00000598772 OR2G3Q8NGZ4 309 aa2.52□□□□□ -2.01
HERC3-213ENST00000598772 MRPL53Q96EL3 112 aaKnown RBP2.52□□□□□ -2.01
HERC3-213ENST00000598772 CHCHD5Q9BSY4 110 aa2.52□□□□□ -2.01
HERC3-213ENST00000598772 IFT46Q9NQC8 304 aa2.52□□□□□ -2.01
HERC3-213ENST00000598772 SLC45A2Q9UMX9 530 aa2.52□□□□□ -2.01
HERC3-213ENST00000598772 CARHSP1Q9Y2V2 147 aaKnown RBP2.52□□□□□ -2.01
HERC3-213ENST00000598772 A0A0G2JRQ6 117 aa2.51□□□□□ -2.01
HERC3-213ENST00000598772 A0A1W2PNN7 141 aa2.51□□□□□ -2.01
HERC3-213ENST00000598772 TCRBV3S1A0A5B6 114 aa2.51□□□□□ -2.01
HERC3-213ENST00000598772 SMCO3A2RU48 225 aa2.51□□□□□ -2.01
HERC3-213ENST00000598772 SMIM30A4D0T7 59 aa2.51□□□□□ -2.01
HERC3-213ENST00000598772 EFCAB10A6NFE3 127 aa2.51□□□□□ -2.01
HERC3-213ENST00000598772 EI24O14681 340 aa2.51□□□□□ -2.01
HERC3-213ENST00000598772 ARL6IP5O75915 188 aa2.51□□□□□ -2.01
HERC3-213ENST00000598772 CD1AP06126 327 aa2.51□□□□□ -2.01
HERC3-213ENST00000598772 CFC1P0CG37 223 aa2.51□□□□□ -2.01
HERC3-213ENST00000598772 MGST1P10620 155 aaKnown RBP2.51□□□□□ -2.01
HERC3-213ENST00000598772 FGF8P55075 233 aaPredicted RBP2.51□□□□□ -2.01
HERC3-213ENST00000598772 RPP30P78346 268 aaKnown RBP2.51□□□□□ -2.01
HERC3-213ENST00000598772 AKR1C1Q04828 323 aa2.51□□□□□ -2.01
HERC3-213ENST00000598772 SURF2Q15527 256 aaPredicted RBP2.51□□□□□ -2.01
HERC3-213ENST00000598772 NMSQ5H8A3 153 aa2.51□□□□□ -2.01
HERC3-213ENST00000598772 TMEM78Q5T7P6 136 aa2.51□□□□□ -2.01
HERC3-213ENST00000598772 GPR107Q5VW38 600 aa2.51□□□□□ -2.01
HERC3-213ENST00000598772 EIF5AL1Q6IS14 154 aaKnown RBP2.51□□□□□ -2.01
HERC3-213ENST00000598772 CFAP161Q6P656 301 aa2.51□□□□□ -2.01
HERC3-213ENST00000598772 ZNF546Q86UE3 836 aa2.51□□□□□ -2.01
HERC3-213ENST00000598772 ZNF485Q8NCK3 441 aa2.51□□□□□ -2.01
HERC3-213ENST00000598772 OR1S1Q8NH92 325 aa2.51□□□□□ -2.01
HERC3-213ENST00000598772 APH1BQ8WW43 257 aa2.51□□□□□ -2.01
HERC3-213ENST00000598772 ATP5SQ99766 215 aa2.51□□□□□ -2.01
HERC3-213ENST00000598772 CHCHD7Q9BUK0 85 aa2.51□□□□□ -2.01
HERC3-213ENST00000598772 ARL6Q9H0F7 186 aa2.51□□□□□ -2.01
HERC3-213ENST00000598772 FXYD6Q9H0Q3 95 aa2.51□□□□□ -2.01
HERC3-213ENST00000598772 SLC39A9Q9NUM3 307 aa2.51□□□□□ -2.01
HERC3-213ENST00000598772 PXMP4Q9Y6I8 212 aa2.51□□□□□ -2.01
HERC3-213ENST00000598772 IGLV8-61A0A075B6I0 122 aa2.5□□□□□ -2.01
HERC3-213ENST00000598772 IGKV2-40A0A087WW87 121 aaPredicted RBP2.5□□□□□ -2.01
HERC3-213ENST00000598772 M0R3E3 92 aa2.5□□□□□ -2.01
HERC3-213ENST00000598772 IGKV2D-40P01614 121 aaPredicted RBP2.5□□□□□ -2.01
HERC3-213ENST00000598772 KRTAP2-3P0C7H8 128 aa2.5□□□□□ -2.01
HERC3-213ENST00000598772 RAB2AP61019 212 aa2.5□□□□□ -2.01
HERC3-213ENST00000598772 SRPXP78539 464 aa2.5□□□□□ -2.01
HERC3-213ENST00000598772 ZNF674Q2M3X9 581 aa2.5□□□□□ -2.01
HERC3-213ENST00000598772 LPCAT3Q6P1A2 487 aa2.5□□□□□ -2.01
HERC3-213ENST00000598772 KRTAP26-1Q6PEX3 210 aa2.5□□□□□ -2.01
HERC3-213ENST00000598772 TMEM91Q6ZNR0 172 aa2.5□□□□□ -2.01
HERC3-213ENST00000598772 S100A7AQ86SG5 101 aa2.5□□□□□ -2.01
HERC3-213ENST00000598772 ZFAND2AQ8N6M9 145 aa2.5□□□□□ -2.01
HERC3-213ENST00000598772 C14orf178Q8N769 122 aaPredicted RBP2.5□□□□□ -2.01
HERC3-213ENST00000598772 NANOGP1Q8N7R0 232 aa2.5□□□□□ -2.01
HERC3-213ENST00000598772 YIPF6Q96EC8 236 aa2.5□□□□□ -2.01
HERC3-213ENST00000598772 TP53RKQ96S44 253 aa2.5□□□□□ -2.01
HERC3-213ENST00000598772 KRTAP2-4Q9BYR9 128 aa2.5□□□□□ -2.01
HERC3-213ENST00000598772 AP4S1Q9Y587 144 aa2.5□□□□□ -2.01
HERC3-213ENST00000598772 U3KQ87 197 aa2.5□□□□□ -2.01
HERC3-213ENST00000598772 LOC100130705A0A1B0GUX0 176 aa2.49□□□□□ -2.01
HERC3-213ENST00000598772 A0A1B0GVG6 124 aa2.49□□□□□ -2.01
HERC3-213ENST00000598772 FAM24AA6NFZ4 105 aa2.49□□□□□ -2.01
HERC3-213ENST00000598772 IFITM5A6NNB3 132 aa2.49□□□□□ -2.01
HERC3-213ENST00000598772 PDCD5O14737 125 aa2.49□□□□□ -2.01
HERC3-213ENST00000598772 LINC00869P0C866 280 aa2.49□□□□□ -2.01
HERC3-213ENST00000598772 HIST1H1EP10412 219 aaKnown RBP2.49□□□□□ -2.01
HERC3-213ENST00000598772 CXCL2P19875 107 aa2.49□□□□□ -2.01
HERC3-213ENST00000598772 RAB11AP62491 216 aa2.49□□□□□ -2.01
HERC3-213ENST00000598772 GAGE6Q13070 117 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms