RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 ABCA13Q86UQ4 5058 aa10.66□□□□□ -0.7
TGFB1-202ENST00000597453 HMGB3O15347 200 aaKnown RBP10.66□□□□□ -0.7
TGFB1-202ENST00000597453 ARL14EPLP0DKL9 152 aa10.66□□□□□ -0.7
TGFB1-202ENST00000597453 RANP62826 216 aaKnown RBP10.66□□□□□ -0.7
TGFB1-202ENST00000597453 ACTR3CQ9C0K3 210 aaPredicted RBP10.66□□□□□ -0.7
TGFB1-202ENST00000597453 CT45A10P0DMU9 189 aa10.65□□□□□ -0.7
TGFB1-202ENST00000597453 LEPP41159 167 aa10.65□□□□□ -0.7
TGFB1-202ENST00000597453 C9orf47Q6ZRZ4 202 aa10.65□□□□□ -0.7
TGFB1-202ENST00000597453 TMEM256Q8N2U0 113 aa10.65□□□□□ -0.7
TGFB1-202ENST00000597453 LINC00477Q96M19 166 aa10.65□□□□□ -0.7
TGFB1-202ENST00000597453 LINC01587Q99440 93 aa10.65□□□□□ -0.7
TGFB1-202ENST00000597453 C20orf144Q9BQM9 153 aa10.65□□□□□ -0.7
TGFB1-202ENST00000597453 MUC4Q99102 2169 aa10.65□□□□□ -0.71
TGFB1-202ENST00000597453 IGKV2-40A0A087WW87 121 aaPredicted RBP10.64□□□□□ -0.71
TGFB1-202ENST00000597453 RBAKDNA6NC62 111 aa10.64□□□□□ -0.71
TGFB1-202ENST00000597453 IGKV2D-40P01614 121 aaPredicted RBP10.64□□□□□ -0.71
TGFB1-202ENST00000597453 CSN1S1P47710 185 aa10.64□□□□□ -0.71
TGFB1-202ENST00000597453 TAS2R60P59551 318 aa10.64□□□□□ -0.71
TGFB1-202ENST00000597453 ERCC8Q13216 396 aa10.64□□□□□ -0.71
TGFB1-202ENST00000597453 FAM74A1Q5RGS3 127 aa10.64□□□□□ -0.71
TGFB1-202ENST00000597453 AKR1C8PQ5T2L2 129 aa10.64□□□□□ -0.71
TGFB1-202ENST00000597453 C15orf53Q8NAA6 179 aa10.64□□□□□ -0.71
TGFB1-202ENST00000597453 FAM19A4Q96LR4 140 aa10.64□□□□□ -0.71
TGFB1-202ENST00000597453 OTORQ9NRC9 128 aa10.64□□□□□ -0.71
TGFB1-202ENST00000597453 F5H768 121 aa10.63□□□□□ -0.71
TGFB1-202ENST00000597453 CXorf1O96002 111 aa10.63□□□□□ -0.71
TGFB1-202ENST00000597453 SLC25A5P05141 298 aaKnown RBP10.63□□□□□ -0.71
TGFB1-202ENST00000597453 HTN1P15515 57 aa10.63□□□□□ -0.71
TGFB1-202ENST00000597453 GCHFRP30047 84 aa10.63□□□□□ -0.71
TGFB1-202ENST00000597453 KIR3DS1Q14943 382 aa10.63□□□□□ -0.71
TGFB1-202ENST00000597453 ZNF726P1Q15940 193 aa10.63□□□□□ -0.71
TGFB1-202ENST00000597453 TMEM78Q5T7P6 136 aa10.63□□□□□ -0.71
TGFB1-202ENST00000597453 GFI1BQ5VTD9 330 aa10.63□□□□□ -0.71
TGFB1-202ENST00000597453 SSX7Q7RTT5 188 aa10.63□□□□□ -0.71
TGFB1-202ENST00000597453 ARL6IP6Q8N6S5 226 aa10.63□□□□□ -0.71
TGFB1-202ENST00000597453 RXFP4Q8TDU9 374 aa10.63□□□□□ -0.71
TGFB1-202ENST00000597453 AGPAT4-IT1Q9H0P7 198 aa10.63□□□□□ -0.71
TGFB1-202ENST00000597453 LRP1BQ9NZR2 4599 aa10.63□□□□□ -0.71
TGFB1-202ENST00000597453 CTXND1A0A1B0GTU2 59 aa10.62□□□□□ -0.71
TGFB1-202ENST00000597453 MED14OSP0DP75 135 aa10.62□□□□□ -0.71
TGFB1-202ENST00000597453 CRISP2P16562 243 aa10.62□□□□□ -0.71
TGFB1-202ENST00000597453 CMTM2Q8TAZ6 248 aa10.62□□□□□ -0.71
TGFB1-202ENST00000597453 C16orf74Q96GX8 76 aa10.62□□□□□ -0.71
TGFB1-202ENST00000597453 VGLL1Q99990 258 aa10.62□□□□□ -0.71
TGFB1-202ENST00000597453 TMEM167BQ9NRX6 74 aa10.62□□□□□ -0.71
TGFB1-202ENST00000597453 TMA7Q9Y2S6 64 aaKnown RBP10.62□□□□□ -0.71
TGFB1-202ENST00000597453 TRBV7-9A0A0J9YWB2 115 aa10.61□□□□□ -0.71
TGFB1-202ENST00000597453 PGPA6NDG6 321 aa10.61□□□□□ -0.71
TGFB1-202ENST00000597453 CBY3A6NI87 242 aa10.61□□□□□ -0.71
TGFB1-202ENST00000597453 KLLNB2CW77 178 aa10.61□□□□□ -0.71
TGFB1-202ENST00000597453 DIRC3C9JPN6 131 aa10.61□□□□□ -0.71
TGFB1-202ENST00000597453 H7BYZ3 331 aa10.61□□□□□ -0.71
TGFB1-202ENST00000597453 NUDT3O95989 172 aa10.61□□□□□ -0.71
TGFB1-202ENST00000597453 ATP5G1P05496 136 aa10.61□□□□□ -0.71
TGFB1-202ENST00000597453 SEC11BP0C7V7 166 aa10.61□□□□□ -0.71
TGFB1-202ENST00000597453 ATP5G3P48201 142 aa10.61□□□□□ -0.71
TGFB1-202ENST00000597453 BLOC1S1P78537 153 aa10.61□□□□□ -0.71
TGFB1-202ENST00000597453 SOHLH1Q5JUK2 328 aa10.61□□□□□ -0.71
TGFB1-202ENST00000597453 C1orf134Q5TEV5 83 aa10.61□□□□□ -0.71
TGFB1-202ENST00000597453 RNASE8Q8TDE3 154 aaKnown RBP10.61□□□□□ -0.71
TGFB1-202ENST00000597453 ATG101Q9BSB4 218 aa10.61□□□□□ -0.71
TGFB1-202ENST00000597453 ZNF492Q9P255 531 aa10.61□□□□□ -0.71
TGFB1-202ENST00000597453 HSPG2P98160 4391 aa10.6□□□□□ -0.71
TGFB1-202ENST00000597453 LOC105371267A0A1B0GV96 52 aa10.6□□□□□ -0.71
TGFB1-202ENST00000597453 C7orf71A4D174 169 aa10.6□□□□□ -0.71
TGFB1-202ENST00000597453 SCO1O75880 301 aa10.6□□□□□ -0.71
TGFB1-202ENST00000597453 SULT1A2P50226 295 aa10.6□□□□□ -0.71
TGFB1-202ENST00000597453 ZNF138P52744 262 aa10.6□□□□□ -0.71
TGFB1-202ENST00000597453 FAM3BP58499 235 aaPredicted RBP10.6□□□□□ -0.71
TGFB1-202ENST00000597453 C10orf91Q5T1B1 145 aa10.6□□□□□ -0.71
TGFB1-202ENST00000597453 ZNF575Q86XF7 245 aa10.6□□□□□ -0.71
TGFB1-202ENST00000597453 ZNRF2Q8NHG8 242 aa10.6□□□□□ -0.71
TGFB1-202ENST00000597453 TMEM263Q8WUH6 116 aaKnown RBP10.6□□□□□ -0.71
TGFB1-202ENST00000597453 NOP10Q9NPE3 64 aaKnown RBP10.6□□□□□ -0.71
TGFB1-202ENST00000597453 TIMM8BQ9Y5J9 83 aaPredicted RBP10.6□□□□□ -0.71
TGFB1-202ENST00000597453 UMAD1C9J7I0 102 aa10.59□□□□□ -0.71
TGFB1-202ENST00000597453 J3KRW8 73 aa10.59□□□□□ -0.71
TGFB1-202ENST00000597453 ZFAND2AQ8N6M9 145 aa10.59□□□□□ -0.71
TGFB1-202ENST00000597453 Q8TAT8 98 aa10.59□□□□□ -0.71
TGFB1-202ENST00000597453 TMED6Q8WW62 240 aa10.59□□□□□ -0.71
TGFB1-202ENST00000597453 CARHSP1Q9Y2V2 147 aaKnown RBP10.59□□□□□ -0.71
TGFB1-202ENST00000597453 TRAV12-3A0A0B4J271 114 aa10.58□□□□□ -0.72
TGFB1-202ENST00000597453 SERTM2A0A1B0GWG4 89 aa10.58□□□□□ -0.72
TGFB1-202ENST00000597453 TMEM218A2RU14 115 aa10.58□□□□□ -0.72
TGFB1-202ENST00000597453 MAP1LC3B2A6NCE7 125 aa10.58□□□□□ -0.72
TGFB1-202ENST00000597453 GGTLC3B5MD39 225 aa10.58□□□□□ -0.72
TGFB1-202ENST00000597453 BTN1A1Q13410 526 aa10.58□□□□□ -0.72
TGFB1-202ENST00000597453 ZNF493Q6ZR52 646 aa10.58□□□□□ -0.72
TGFB1-202ENST00000597453 GOLT1AQ6ZVE7 132 aa10.58□□□□□ -0.72
TGFB1-202ENST00000597453 IQCF2Q8IXL9 164 aa10.58□□□□□ -0.72
TGFB1-202ENST00000597453 C5orf17Q8NAS9 161 aa10.58□□□□□ -0.72
TGFB1-202ENST00000597453 PYGO2Q9BRQ0 406 aa10.58□□□□□ -0.72
TGFB1-202ENST00000597453 MAP1LC3BQ9GZQ8 125 aa10.58□□□□□ -0.72
TGFB1-202ENST00000597453 RPH3ALQ9UNE2 315 aa10.58□□□□□ -0.72
TGFB1-202ENST00000597453 LINC00588Q9Y4M8 146 aa10.58□□□□□ -0.72
TGFB1-202ENST00000597453 LENEPQ9Y5L5 61 aa10.58□□□□□ -0.72
TGFB1-202ENST00000597453 NBDYA0A0U1RRE5 68 aa10.57□□□□□ -0.72
TGFB1-202ENST00000597453 A0A1W2PRE2 83 aa10.57□□□□□ -0.72
TGFB1-202ENST00000597453 GPX1P07203 203 aa10.57□□□□□ -0.72
TGFB1-202ENST00000597453 RAB5CP51148 216 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms