RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 ODF3Q96PU9 254 aa8.88□□□□□ -0.99
SHKBP1-213ENST00000597325 SRD5A3Q9H8P0 318 aa8.88□□□□□ -0.99
SHKBP1-213ENST00000597325 C19orf73Q9NVV2 129 aa8.88□□□□□ -0.99
SHKBP1-213ENST00000597325 ZNF492Q9P255 531 aa8.88□□□□□ -0.99
SHKBP1-213ENST00000597325 LENEPQ9Y5L5 61 aa8.88□□□□□ -0.99
SHKBP1-213ENST00000597325 TMEM218A2RU14 115 aa8.87□□□□□ -0.99
SHKBP1-213ENST00000597325 C9JCJ5 164 aa8.87□□□□□ -0.99
SHKBP1-213ENST00000597325 LTAP01374 205 aa8.87□□□□□ -0.99
SHKBP1-213ENST00000597325 IGLV2-11P01706 119 aa8.87□□□□□ -0.99
SHKBP1-213ENST00000597325 TSPOP30536 169 aa8.87□□□□□ -0.99
SHKBP1-213ENST00000597325 BAGE2Q86Y30 109 aa8.87□□□□□ -0.99
SHKBP1-213ENST00000597325 IGF2BP2-AS1Q96M15 143 aa8.87□□□□□ -0.99
SHKBP1-213ENST00000597325 NIPSNAP3BQ9BS92 247 aa8.87□□□□□ -0.99
SHKBP1-213ENST00000597325 TUBA4BQ9H853 241 aa8.87□□□□□ -0.99
SHKBP1-213ENST00000597325 ZFP30Q9Y2G7 519 aa8.87□□□□□ -0.99
SHKBP1-213ENST00000597325 TRBV7-9A0A0J9YWB2 115 aa8.86□□□□□ -0.99
SHKBP1-213ENST00000597325 F8W036 122 aa8.86□□□□□ -0.99
SHKBP1-213ENST00000597325 CT45A10P0DMU9 189 aa8.86□□□□□ -0.99
SHKBP1-213ENST00000597325 RPL35AP18077 110 aaKnown RBP8.86□□□□□ -0.99
SHKBP1-213ENST00000597325 NUTF2P61970 127 aaKnown RBP8.86□□□□□ -0.99
SHKBP1-213ENST00000597325 TRPT1Q86TN4 253 aaKnown RBP8.86□□□□□ -0.99
SHKBP1-213ENST00000597325 Q8N1Y9 231 aa8.86□□□□□ -0.99
SHKBP1-213ENST00000597325 SMIM12Q96EX1 92 aa8.86□□□□□ -0.99
SHKBP1-213ENST00000597325 CLUHP3Q96NS8 147 aa8.86□□□□□ -0.99
SHKBP1-213ENST00000597325 NAT8Q9UHE5 227 aa8.86□□□□□ -0.99
SHKBP1-213ENST00000597325 A8MTW9 85 aa8.85□□□□□ -0.99
SHKBP1-213ENST00000597325 AMBPP02760 352 aa8.85□□□□□ -0.99
SHKBP1-213ENST00000597325 MGST1P10620 155 aaKnown RBP8.85□□□□□ -0.99
SHKBP1-213ENST00000597325 SPINK13Q1W4C9 94 aa8.85□□□□□ -0.99
SHKBP1-213ENST00000597325 TMEM241Q24JQ0 296 aa8.85□□□□□ -0.99
SHKBP1-213ENST00000597325 MORN3Q6PF18 240 aaPredicted RBP8.85□□□□□ -0.99
SHKBP1-213ENST00000597325 TMEM183AQ8IXX5 376 aa8.85□□□□□ -0.99
SHKBP1-213ENST00000597325 NHLRC2Q8NBF2 726 aa8.85□□□□□ -0.99
SHKBP1-213ENST00000597325 BIN3Q9NQY0 253 aa8.85□□□□□ -0.99
SHKBP1-213ENST00000597325 TRBV20OR9-2A0A075B6H5 130 aa8.84□□□□□ -0.99
SHKBP1-213ENST00000597325 KRBOX1C9JBD0 128 aa8.84□□□□□ -0.99
SHKBP1-213ENST00000597325 J3KRW8 73 aa8.84□□□□□ -0.99
SHKBP1-213ENST00000597325 M0R2Z0 102 aa8.84□□□□□ -0.99
SHKBP1-213ENST00000597325 GPX1P07203 203 aa8.84□□□□□ -0.99
SHKBP1-213ENST00000597325 IGHV4-30-4P0DP06 118 aa8.84□□□□□ -0.99
SHKBP1-213ENST00000597325 CDKN1BP46527 198 aa8.84□□□□□ -0.99
SHKBP1-213ENST00000597325 SMUG1Q53HV7 270 aa8.84□□□□□ -0.99
SHKBP1-213ENST00000597325 AMTNQ6UX39 209 aa8.84□□□□□ -0.99
SHKBP1-213ENST00000597325 C8orf49Q96NF6 230 aa8.84□□□□□ -0.99
SHKBP1-213ENST00000597325 SEC11CQ9BY50 192 aa8.84□□□□□ -0.99
SHKBP1-213ENST00000597325 LY96Q9Y6Y9 160 aa8.84□□□□□ -0.99
SHKBP1-213ENST00000597325 FAT2Q9NYQ8 4349 aa8.84□□□□□ -0.99
SHKBP1-213ENST00000597325 LOC102724200A0A096LPH7 203 aaPredicted RBP8.83□□□□□ -1
SHKBP1-213ENST00000597325 PGPEP1LA6NFU8 196 aa8.83□□□□□ -1
SHKBP1-213ENST00000597325 CRISP2P16562 243 aa8.83□□□□□ -1
SHKBP1-213ENST00000597325 APOC4P55056 127 aa8.83□□□□□ -1
SHKBP1-213ENST00000597325 FXYD7P58549 80 aa8.83□□□□□ -1
SHKBP1-213ENST00000597325 ADIRFQ15847 76 aa8.83□□□□□ -1
SHKBP1-213ENST00000597325 PRR27Q6MZM9 219 aa8.83□□□□□ -1
SHKBP1-213ENST00000597325 TVP23CQ96ET8 276 aa8.83□□□□□ -1
SHKBP1-213ENST00000597325 FAM19A4Q96LR4 140 aa8.83□□□□□ -1
SHKBP1-213ENST00000597325 C1QTNF4Q9BXJ3 329 aa8.83□□□□□ -1
SHKBP1-213ENST00000597325 ZMAT4Q9H898 229 aa8.83□□□□□ -1
SHKBP1-213ENST00000597325 DYNC1H1Q14204 4646 aaKnown RBP8.82□□□□□ -1
SHKBP1-213ENST00000597325 MUC4Q99102 2169 aa8.82□□□□□ -1
SHKBP1-213ENST00000597325 C7orf71A4D174 169 aa8.82□□□□□ -1
SHKBP1-213ENST00000597325 CA1P00915 261 aaPredicted RBP8.82□□□□□ -1
SHKBP1-213ENST00000597325 GCGP01275 180 aa8.82□□□□□ -1
SHKBP1-213ENST00000597325 INSP01308 110 aa8.82□□□□□ -1
SHKBP1-213ENST00000597325 ADCYAP1P18509 176 aa8.82□□□□□ -1
SHKBP1-213ENST00000597325 RNASE4P34096 147 aaKnown RBP8.82□□□□□ -1
SHKBP1-213ENST00000597325 PNRC1Q12796 327 aaPredicted RBP8.82□□□□□ -1
SHKBP1-213ENST00000597325 FAM162BQ5T6X4 162 aa8.82□□□□□ -1
SHKBP1-213ENST00000597325 LINC01551Q86U37 167 aa8.82□□□□□ -1
SHKBP1-213ENST00000597325 ZFAND2AQ8N6M9 145 aa8.82□□□□□ -1
SHKBP1-213ENST00000597325 ZC2HC1AQ96GY0 325 aa8.82□□□□□ -1
SHKBP1-213ENST00000597325 DNAH2Q9P225 4427 aa8.82□□□□□ -1
SHKBP1-213ENST00000597325 TRAV12-2A0A075B6T6 113 aa8.81□□□□□ -1
SHKBP1-213ENST00000597325 KLLNB2CW77 178 aa8.81□□□□□ -1
SHKBP1-213ENST00000597325 IGLV2-8P01709 118 aa8.81□□□□□ -1
SHKBP1-213ENST00000597325 RPL23P62829 140 aaKnown RBP8.81□□□□□ -1
SHKBP1-213ENST00000597325 BTN1A1Q13410 526 aa8.81□□□□□ -1
SHKBP1-213ENST00000597325 COX8CQ7Z4L0 72 aa8.81□□□□□ -1
SHKBP1-213ENST00000597325 OCC1Q8TAD7 63 aa8.81□□□□□ -1
SHKBP1-213ENST00000597325 DAZAP1Q96EP5 407 aaKnown RBP8.81□□□□□ -1
SHKBP1-213ENST00000597325 MLST8Q9BVC4 326 aa8.81□□□□□ -1
SHKBP1-213ENST00000597325 CSTL1Q9H114 145 aa8.81□□□□□ -1
SHKBP1-213ENST00000597325 SDF2L1Q9HCN8 221 aa8.81□□□□□ -1
SHKBP1-213ENST00000597325 CARHSP1Q9Y2V2 147 aaKnown RBP8.81□□□□□ -1
SHKBP1-213ENST00000597325 TRAV21A0A0B4J279 112 aa8.8□□□□□ -1
SHKBP1-213ENST00000597325 KIR2DL5BA0A0G2JN68 375 aa8.8□□□□□ -1
SHKBP1-213ENST00000597325 KIR2DL5BA0A0G2JPC4 375 aa8.8□□□□□ -1
SHKBP1-213ENST00000597325 A8MZ25 164 aa8.8□□□□□ -1
SHKBP1-213ENST00000597325 K7EN84 100 aa8.8□□□□□ -1
SHKBP1-213ENST00000597325 M0R036 132 aa8.8□□□□□ -1
SHKBP1-213ENST00000597325 PFN1P07737 140 aaKnown RBP8.8□□□□□ -1
SHKBP1-213ENST00000597325 PRR9Q5T870 116 aa8.8□□□□□ -1
SHKBP1-213ENST00000597325 GFI1BQ5VTD9 330 aa8.8□□□□□ -1
SHKBP1-213ENST00000597325 KIR2DL5AQ8N109 375 aa8.8□□□□□ -1
SHKBP1-213ENST00000597325 KIR2DL5BQ8NHK3 375 aa8.8□□□□□ -1
SHKBP1-213ENST00000597325 LINC00476Q8WZB0 136 aa8.8□□□□□ -1
SHKBP1-213ENST00000597325 TM2D3Q9BRN9 247 aa8.8□□□□□ -1
SHKBP1-213ENST00000597325 XCL2Q9UBD3 114 aa8.8□□□□□ -1
SHKBP1-213ENST00000597325 HSPG2P98160 4391 aa8.79□□□□□ -1
SHKBP1-213ENST00000597325 TRAV12-3A0A0B4J271 114 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms