RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 H2AFB1P0C5Y9 115 aa7.92□□□□□ -1.14
LIG1-211ENST00000596457 DEFB130BP0DP73 79 aa7.92□□□□□ -1.14
LIG1-211ENST00000596457 DEFB130AP0DP74 79 aa7.92□□□□□ -1.14
LIG1-211ENST00000596457 CRISP2P16562 243 aa7.92□□□□□ -1.14
LIG1-211ENST00000596457 CST9LP1Q5W188 147 aa7.92□□□□□ -1.14
LIG1-211ENST00000596457 ZFAND2AQ8N6M9 145 aa7.92□□□□□ -1.14
LIG1-211ENST00000596457 C2CD4CQ8TF44 421 aa7.92□□□□□ -1.14
LIG1-211ENST00000596457 DNAH7Q8WXX0 4024 aa7.91□□□□□ -1.14
LIG1-211ENST00000596457 DEFB131BA0A096LNP1 70 aa7.91□□□□□ -1.14
LIG1-211ENST00000596457 FAM74A7A6NL05 159 aa7.91□□□□□ -1.14
LIG1-211ENST00000596457 SNURFLB1AK76 121 aa7.91□□□□□ -1.14
LIG1-211ENST00000596457 F6UZH7 168 aa7.91□□□□□ -1.14
LIG1-211ENST00000596457 ZNF324O75467 553 aaPredicted RBP7.91□□□□□ -1.14
LIG1-211ENST00000596457 NKX2-5P52952 324 aaPredicted RBP7.91□□□□□ -1.14
LIG1-211ENST00000596457 MUC21Q5SSG8 566 aa7.91□□□□□ -1.14
LIG1-211ENST00000596457 EIF5AL1Q6IS14 154 aaKnown RBP7.91□□□□□ -1.14
LIG1-211ENST00000596457 PRNTQ86SH4 94 aa7.91□□□□□ -1.14
LIG1-211ENST00000596457 SLC51BQ86UW2 128 aa7.91□□□□□ -1.14
LIG1-211ENST00000596457 C9orf62Q8N4C0 152 aa7.91□□□□□ -1.14
LIG1-211ENST00000596457 PYGO2Q9BRQ0 406 aa7.91□□□□□ -1.14
LIG1-211ENST00000596457 TREM1Q9NP99 234 aa7.91□□□□□ -1.14
LIG1-211ENST00000596457 NOP10Q9NPE3 64 aaKnown RBP7.91□□□□□ -1.14
LIG1-211ENST00000596457 PSG8Q9UQ74 426 aa7.91□□□□□ -1.14
LIG1-211ENST00000596457 TRAV34A0A0B4J273 112 aa7.9□□□□□ -1.14
LIG1-211ENST00000596457 TEX48A0A1B0GUV7 120 aa7.9□□□□□ -1.14
LIG1-211ENST00000596457 PAGE4O60829 102 aa7.9□□□□□ -1.14
LIG1-211ENST00000596457 NMBP08949 121 aa7.9□□□□□ -1.14
LIG1-211ENST00000596457 DPPA3Q6W0C5 159 aa7.9□□□□□ -1.14
LIG1-211ENST00000596457 ZNF493Q6ZR52 646 aa7.9□□□□□ -1.14
LIG1-211ENST00000596457 EIF4E3Q8N5X7 224 aaKnown RBP7.9□□□□□ -1.14
LIG1-211ENST00000596457 ARL6IP6Q8N6S5 226 aa7.9□□□□□ -1.14
LIG1-211ENST00000596457 CYB561D1Q8N8Q1 229 aa7.9□□□□□ -1.14
LIG1-211ENST00000596457 TMEM263Q8WUH6 116 aaKnown RBP7.9□□□□□ -1.14
LIG1-211ENST00000596457 MBD3L1Q8WWY6 194 aa7.9□□□□□ -1.14
LIG1-211ENST00000596457 LINC00479Q96M42 142 aa7.9□□□□□ -1.14
LIG1-211ENST00000596457 C8orf49Q96NF6 230 aa7.9□□□□□ -1.14
LIG1-211ENST00000596457 NDFIP1Q9BT67 221 aa7.9□□□□□ -1.14
LIG1-211ENST00000596457 NAGKQ9UJ70 344 aa7.9□□□□□ -1.14
LIG1-211ENST00000596457 TP53TG3Q9ULZ0 132 aa7.9□□□□□ -1.14
LIG1-211ENST00000596457 TIMM8BQ9Y5J9 83 aaPredicted RBP7.9□□□□□ -1.14
LIG1-211ENST00000596457 IGHV1OR15-1A0A075B7D0 117 aa7.89□□□□□ -1.15
LIG1-211ENST00000596457 SERTM2A0A1B0GWG4 89 aa7.89□□□□□ -1.15
LIG1-211ENST00000596457 PLAC8L1A1L4L8 177 aa7.89□□□□□ -1.15
LIG1-211ENST00000596457 LYRM9A8MSI8 78 aa7.89□□□□□ -1.15
LIG1-211ENST00000596457 PEX7O00628 323 aa7.89□□□□□ -1.15
LIG1-211ENST00000596457 ATP5G3P48201 142 aa7.89□□□□□ -1.15
LIG1-211ENST00000596457 FLI1Q01543 452 aaPredicted RBP7.89□□□□□ -1.15
LIG1-211ENST00000596457 RNASE8Q8TDE3 154 aaKnown RBP7.89□□□□□ -1.15
LIG1-211ENST00000596457 TVP23CQ96ET8 276 aa7.89□□□□□ -1.15
LIG1-211ENST00000596457 ATG101Q9BSB4 218 aa7.89□□□□□ -1.15
LIG1-211ENST00000596457 NKX6-2Q9C056 277 aaPredicted RBP7.89□□□□□ -1.15
LIG1-211ENST00000596457 GSN-AS1Q9NRJ2 163 aa7.89□□□□□ -1.15
LIG1-211ENST00000596457 LENEPQ9Y5L5 61 aa7.89□□□□□ -1.15
LIG1-211ENST00000596457 TRBV7-9A0A0J9YWB2 115 aa7.88□□□□□ -1.15
LIG1-211ENST00000596457 GAGE12BA1L429 117 aa7.88□□□□□ -1.15
LIG1-211ENST00000596457 GAGE7O76087 117 aa7.88□□□□□ -1.15
LIG1-211ENST00000596457 LY6G6CO95867 125 aa7.88□□□□□ -1.15
LIG1-211ENST00000596457 GAGE12FP0CL80 117 aa7.88□□□□□ -1.15
LIG1-211ENST00000596457 GAGE12GP0CL81 117 aa7.88□□□□□ -1.15
LIG1-211ENST00000596457 GAGE12IP0CL82 117 aa7.88□□□□□ -1.15
LIG1-211ENST00000596457 SULT1A2P50226 295 aa7.88□□□□□ -1.15
LIG1-211ENST00000596457 PPT1P50897 306 aa7.88□□□□□ -1.15
LIG1-211ENST00000596457 FAM159AQ6UWV7 190 aa7.88□□□□□ -1.15
LIG1-211ENST00000596457 TMEM75Q8N9X5 138 aa7.88□□□□□ -1.15
LIG1-211ENST00000596457 IGHV4-4A0A075B6R2 117 aa7.87□□□□□ -1.15
LIG1-211ENST00000596457 IGLV2-11P01706 119 aa7.87□□□□□ -1.15
LIG1-211ENST00000596457 RAB5CP51148 216 aa7.87□□□□□ -1.15
LIG1-211ENST00000596457 UBE2G1P62253 170 aa7.87□□□□□ -1.15
LIG1-211ENST00000596457 CCL20P78556 96 aa7.87□□□□□ -1.15
LIG1-211ENST00000596457 TMEM183BQ1AE95 376 aa7.87□□□□□ -1.15
LIG1-211ENST00000596457 Q6AWC8 147 aa7.87□□□□□ -1.15
LIG1-211ENST00000596457 TMEM183AQ8IXX5 376 aa7.87□□□□□ -1.15
LIG1-211ENST00000596457 ZNF680Q8NEM1 530 aa7.87□□□□□ -1.15
LIG1-211ENST00000596457 BOLA1Q9Y3E2 137 aa7.87□□□□□ -1.15
LIG1-211ENST00000596457 KLF12Q9Y4X4 402 aa7.87□□□□□ -1.15
LIG1-211ENST00000596457 TRAV21A0A0B4J279 112 aa7.86□□□□□ -1.15
LIG1-211ENST00000596457 F5H768 121 aa7.86□□□□□ -1.15
LIG1-211ENST00000596457 TEX46H3BTG2 121 aa7.86□□□□□ -1.15
LIG1-211ENST00000596457 GCGP01275 180 aa7.86□□□□□ -1.15
LIG1-211ENST00000596457 AKR1C3P42330 323 aa7.86□□□□□ -1.15
LIG1-211ENST00000596457 ANXA2RQ3ZCQ2 193 aa7.86□□□□□ -1.15
LIG1-211ENST00000596457 SMUG1Q53HV7 270 aa7.86□□□□□ -1.15
LIG1-211ENST00000596457 ALKAL2Q6UX46 152 aa7.86□□□□□ -1.15
LIG1-211ENST00000596457 HIST1H2BAQ96A08 127 aa7.86□□□□□ -1.15
LIG1-211ENST00000596457 LINC00467Q9BRT7 94 aa7.86□□□□□ -1.15
LIG1-211ENST00000596457 GNG13Q9P2W3 67 aa7.86□□□□□ -1.15
LIG1-211ENST00000596457 APLNQ9ULZ1 77 aa7.86□□□□□ -1.15
LIG1-211ENST00000596457 ARL2-SNX15V9GYD0 113 aa7.86□□□□□ -1.15
LIG1-211ENST00000596457 TRGV1A0A0A0MS02 117 aa7.85□□□□□ -1.15
LIG1-211ENST00000596457 GNRH2O43555 120 aa7.85□□□□□ -1.15
LIG1-211ENST00000596457 ATP5G1P05496 136 aa7.85□□□□□ -1.15
LIG1-211ENST00000596457 ZNF80P51504 273 aaPredicted RBP7.85□□□□□ -1.15
LIG1-211ENST00000596457 ZNF415Q09FC8 603 aa7.85□□□□□ -1.15
LIG1-211ENST00000596457 SAPCD1Q5SSQ6 148 aa7.85□□□□□ -1.15
LIG1-211ENST00000596457 Q6ZTI0 123 aa7.85□□□□□ -1.15
LIG1-211ENST00000596457 C11orf72Q8NBR9 251 aa7.85□□□□□ -1.15
LIG1-211ENST00000596457 LYSTQ99698 3801 aa7.85□□□□□ -1.15
LIG1-211ENST00000596457 CSMD3Q7Z407 3707 aa7.84□□□□□ -1.15
LIG1-211ENST00000596457 STARD9Q9P2P6 4700 aa7.84□□□□□ -1.15
LIG1-211ENST00000596457 TRGV11A0A075B6L2 103 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms