RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

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Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 HMGB3O15347 200 aaKnown RBP9.13□□□□□ -0.95
USE1-207ENST00000596136 SPINK4O60575 86 aa9.13□□□□□ -0.95
USE1-207ENST00000596136 GAGE7O76087 117 aa9.13□□□□□ -0.95
USE1-207ENST00000596136 GAGE12FP0CL80 117 aa9.13□□□□□ -0.95
USE1-207ENST00000596136 GAGE12GP0CL81 117 aa9.13□□□□□ -0.95
USE1-207ENST00000596136 GAGE12IP0CL82 117 aa9.13□□□□□ -0.95
USE1-207ENST00000596136 TCL1AP56279 114 aa9.13□□□□□ -0.95
USE1-207ENST00000596136 Q6AWC8 147 aa9.13□□□□□ -0.95
USE1-207ENST00000596136 Q6ZTI0 123 aa9.13□□□□□ -0.95
USE1-207ENST00000596136 CMTM2Q8TAZ6 248 aa9.13□□□□□ -0.95
USE1-207ENST00000596136 ST6GAL2Q96JF0 529 aa9.13□□□□□ -0.95
USE1-207ENST00000596136 HYLS1Q96M11 299 aa9.13□□□□□ -0.95
USE1-207ENST00000596136 SH3BGRL3Q9H299 93 aa9.13□□□□□ -0.95
USE1-207ENST00000596136 H3BNG1 76 aa9.12□□□□□ -0.95
USE1-207ENST00000596136 RGS13O14921 159 aa9.12□□□□□ -0.95
USE1-207ENST00000596136 HOXA5P20719 270 aa9.12□□□□□ -0.95
USE1-207ENST00000596136 GCHFRP30047 84 aa9.12□□□□□ -0.95
USE1-207ENST00000596136 Q6ZR54 194 aa9.12□□□□□ -0.95
USE1-207ENST00000596136 ACTR3CQ9C0K3 210 aaPredicted RBP9.12□□□□□ -0.95
USE1-207ENST00000596136 TP53TG3Q9ULZ0 132 aa9.12□□□□□ -0.95
USE1-207ENST00000596136 SERTM2A0A1B0GWG4 89 aa9.11□□□□□ -0.95
USE1-207ENST00000596136 TAAR5O14804 337 aa9.11□□□□□ -0.95
USE1-207ENST00000596136 TDRG1Q3Y452 100 aa9.11□□□□□ -0.95
USE1-207ENST00000596136 GOLT1AQ6ZVE7 132 aa9.11□□□□□ -0.95
USE1-207ENST00000596136 UBE2DNLQ8IWF7 75 aa9.11□□□□□ -0.95
USE1-207ENST00000596136 CYTL1Q9NRR1 136 aa9.11□□□□□ -0.95
USE1-207ENST00000596136 TMEM167BQ9NRX6 74 aa9.11□□□□□ -0.95
USE1-207ENST00000596136 KLF12Q9Y4X4 402 aa9.11□□□□□ -0.95
USE1-207ENST00000596136 CXorf1O96002 111 aa9.1□□□□□ -0.95
USE1-207ENST00000596136 SSX7Q7RTT5 188 aa9.1□□□□□ -0.95
USE1-207ENST00000596136 C5orf17Q8NAS9 161 aa9.1□□□□□ -0.95
USE1-207ENST00000596136 TVP23CQ96ET8 276 aa9.1□□□□□ -0.95
USE1-207ENST00000596136 TMPRSS5Q9H3S3 457 aa9.1□□□□□ -0.95
USE1-207ENST00000596136 TRAV26-1A0A087WT03 109 aa9.09□□□□□ -0.95
USE1-207ENST00000596136 TRGV1A0A0A0MS02 117 aa9.09□□□□□ -0.95
USE1-207ENST00000596136 NUDT3O95989 172 aa9.09□□□□□ -0.95
USE1-207ENST00000596136 TCRAP04437 139 aa9.09□□□□□ -0.95
USE1-207ENST00000596136 GNG5P63218 68 aa9.09□□□□□ -0.95
USE1-207ENST00000596136 OR5I1Q13606 314 aa9.09□□□□□ -0.95
USE1-207ENST00000596136 ZNF726P1Q15940 193 aa9.09□□□□□ -0.95
USE1-207ENST00000596136 LINC00336Q6ZUF6 198 aa9.09□□□□□ -0.95
USE1-207ENST00000596136 TRGV2A0A075B6R0 118 aa9.08□□□□□ -0.96
USE1-207ENST00000596136 TRAV8-1A0A0A6YYK1 113 aa9.08□□□□□ -0.96
USE1-207ENST00000596136 CTXND1A0A1B0GTU2 59 aa9.08□□□□□ -0.96
USE1-207ENST00000596136 A0A1W2PRE2 83 aa9.08□□□□□ -0.96
USE1-207ENST00000596136 GGTLC3B5MD39 225 aa9.08□□□□□ -0.96
USE1-207ENST00000596136 ARPC5O15511 151 aa9.08□□□□□ -0.96
USE1-207ENST00000596136 CCL18P55774 89 aa9.08□□□□□ -0.96
USE1-207ENST00000596136 ZNRF2Q8NHG8 242 aa9.08□□□□□ -0.96
USE1-207ENST00000596136 ARPC5LQ9BPX5 153 aa9.08□□□□□ -0.96
USE1-207ENST00000596136 TREM1Q9NP99 234 aa9.08□□□□□ -0.96
USE1-207ENST00000596136 MDFICQ9P1T7 246 aa9.08□□□□□ -0.96
USE1-207ENST00000596136 EPDR1Q9UM22 224 aa9.08□□□□□ -0.96
USE1-207ENST00000596136 RPH3ALQ9UNE2 315 aa9.08□□□□□ -0.96
USE1-207ENST00000596136 TRAV21A0A0B4J279 112 aa9.07□□□□□ -0.96
USE1-207ENST00000596136 HMSDA8MTL9 139 aa9.07□□□□□ -0.96
USE1-207ENST00000596136 M0R2N4 97 aa9.07□□□□□ -0.96
USE1-207ENST00000596136 RTL8CO15255 209 aa9.07□□□□□ -0.96
USE1-207ENST00000596136 IGLV2-11P01706 119 aa9.07□□□□□ -0.96
USE1-207ENST00000596136 SUMO1P63165 101 aaKnown RBP9.07□□□□□ -0.96
USE1-207ENST00000596136 ZNF415Q09FC8 603 aa9.07□□□□□ -0.96
USE1-207ENST00000596136 ZNF345Q14585 488 aa9.07□□□□□ -0.96
USE1-207ENST00000596136 MUC21Q5SSG8 566 aa9.07□□□□□ -0.96
USE1-207ENST00000596136 FAM159AQ6UWV7 190 aa9.07□□□□□ -0.96
USE1-207ENST00000596136 KCNRGQ8N5I3 272 aa9.07□□□□□ -0.96
USE1-207ENST00000596136 RASL10AQ92737 203 aa9.07□□□□□ -0.96
USE1-207ENST00000596136 VSIG2Q96IQ7 327 aa9.07□□□□□ -0.96
USE1-207ENST00000596136 ATG101Q9BSB4 218 aa9.07□□□□□ -0.96
USE1-207ENST00000596136 SPXQ9BT56 116 aa9.07□□□□□ -0.96
USE1-207ENST00000596136 LINC00588Q9Y4M8 146 aa9.07□□□□□ -0.96
USE1-207ENST00000596136 IGLV2-18A0A075B6J9 118 aa9.06□□□□□ -0.96
USE1-207ENST00000596136 TRGV11A0A075B6L2 103 aa9.06□□□□□ -0.96
USE1-207ENST00000596136 A0A0J9YY99 117 aa9.06□□□□□ -0.96
USE1-207ENST00000596136 FBLL1A6NHQ2 334 aaKnown RBP9.06□□□□□ -0.96
USE1-207ENST00000596136 SMLR1H3BR10 107 aa9.06□□□□□ -0.96
USE1-207ENST00000596136 AKR1C8PQ5T2L2 129 aa9.06□□□□□ -0.96
USE1-207ENST00000596136 OR11H4Q8NGC9 324 aa9.06□□□□□ -0.96
USE1-207ENST00000596136 K7EQM0 130 aa9.05□□□□□ -0.96
USE1-207ENST00000596136 TMEM183BQ1AE95 376 aa9.05□□□□□ -0.96
USE1-207ENST00000596136 TMEM183AQ8IXX5 376 aa9.05□□□□□ -0.96
USE1-207ENST00000596136 CYB561D1Q8N8Q1 229 aa9.05□□□□□ -0.96
USE1-207ENST00000596136 TMEM75Q8N9X5 138 aa9.05□□□□□ -0.96
USE1-207ENST00000596136 MRPL16Q9NX20 251 aaKnown RBP9.05□□□□□ -0.96
USE1-207ENST00000596136 PSG8Q9UQ74 426 aa9.05□□□□□ -0.96
USE1-207ENST00000596136 PKD1P98161 4303 aa9.05□□□□□ -0.96
USE1-207ENST00000596136 PKHD1P08F94 4074 aa9.04□□□□□ -0.96
USE1-207ENST00000596136 A0A096LPF7 62 aa9.04□□□□□ -0.96
USE1-207ENST00000596136 IGHV3-16A0A0C4DH30 117 aa9.04□□□□□ -0.96
USE1-207ENST00000596136 A0A1B0GVY2 172 aa9.04□□□□□ -0.96
USE1-207ENST00000596136 GNRH2O43555 120 aa9.04□□□□□ -0.96
USE1-207ENST00000596136 FLI1Q01543 452 aaPredicted RBP9.04□□□□□ -0.96
USE1-207ENST00000596136 SLAQ13239 276 aa9.04□□□□□ -0.96
USE1-207ENST00000596136 FHL2Q14192 279 aa9.04□□□□□ -0.96
USE1-207ENST00000596136 ESRGQ1W209 222 aa9.04□□□□□ -0.96
USE1-207ENST00000596136 IQCF2Q8IXL9 164 aa9.04□□□□□ -0.96
USE1-207ENST00000596136 KCNS1Q96KK3 526 aa9.04□□□□□ -0.96
USE1-207ENST00000596136 SGK494Q96LW2 274 aa9.04□□□□□ -0.96
USE1-207ENST00000596136 NDFIP1Q9BT67 221 aa9.04□□□□□ -0.96
USE1-207ENST00000596136 UPK3BQ9BT76 320 aa9.04□□□□□ -0.96
USE1-207ENST00000596136 NKX6-2Q9C056 277 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms