RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 RASL10AQ92737 203 aa6.68□□□□□ -1.34
LIG1-209ENST00000596104 FAM167A-AS1Q96KT0 104 aa6.68□□□□□ -1.34
LIG1-209ENST00000596104 SDHCQ99643 169 aaPredicted RBP6.68□□□□□ -1.34
LIG1-209ENST00000596104 C20orf85Q9H1P6 137 aa6.68□□□□□ -1.34
LIG1-209ENST00000596104 AAMDCQ9H7C9 122 aa6.68□□□□□ -1.34
LIG1-209ENST00000596104 LSM5Q9Y4Y9 91 aaKnown RBP6.68□□□□□ -1.34
LIG1-209ENST00000596104 IGSF23A1L1A6 192 aa6.67□□□□□ -1.34
LIG1-209ENST00000596104 INPP1P49441 399 aa6.67□□□□□ -1.34
LIG1-209ENST00000596104 ZNF138P52744 262 aa6.67□□□□□ -1.34
LIG1-209ENST00000596104 BAXQ07812 192 aa6.67□□□□□ -1.34
LIG1-209ENST00000596104 SPANXN2Q5MJ10 180 aa6.67□□□□□ -1.34
LIG1-209ENST00000596104 MUC21Q5SSG8 566 aa6.67□□□□□ -1.34
LIG1-209ENST00000596104 TRIQKQ629K1 86 aa6.67□□□□□ -1.34
LIG1-209ENST00000596104 TMEM252Q8N6L7 170 aa6.67□□□□□ -1.34
LIG1-209ENST00000596104 Q8N814 137 aa6.67□□□□□ -1.34
LIG1-209ENST00000596104 PCNPQ8WW12 178 aaKnown RBP6.67□□□□□ -1.34
LIG1-209ENST00000596104 SLC25A2Q9BXI2 301 aa6.67□□□□□ -1.34
LIG1-209ENST00000596104 IGHV3-38A0A0C4DH36 116 aa6.66□□□□□ -1.34
LIG1-209ENST00000596104 KRTAP29-1A8MX34 341 aaPredicted RBP6.66□□□□□ -1.34
LIG1-209ENST00000596104 NBEAP1P0C6P0 100 aa6.66□□□□□ -1.34
LIG1-209ENST00000596104 FGF7P21781 194 aa6.66□□□□□ -1.34
LIG1-209ENST00000596104 S100A11P31949 105 aa6.66□□□□□ -1.34
LIG1-209ENST00000596104 SULT1A1P50225 295 aa6.66□□□□□ -1.34
LIG1-209ENST00000596104 TIRAPP58753 221 aa6.66□□□□□ -1.34
LIG1-209ENST00000596104 ZNF266Q14584 549 aa6.66□□□□□ -1.34
LIG1-209ENST00000596104 ZNF846Q147U1 533 aa6.66□□□□□ -1.34
LIG1-209ENST00000596104 MIR17HGQ75NE6 70 aa6.66□□□□□ -1.34
LIG1-209ENST00000596104 TXNDC17Q9BRA2 123 aa6.66□□□□□ -1.34
LIG1-209ENST00000596104 SPXQ9BT56 116 aa6.66□□□□□ -1.34
LIG1-209ENST00000596104 LYRM2Q9NU23 88 aaPredicted RBP6.66□□□□□ -1.34
LIG1-209ENST00000596104 TRAV4A0A0B4J268 109 aa6.65□□□□□ -1.34
LIG1-209ENST00000596104 LOC100131303A0A0U1RQF7 123 aa6.65□□□□□ -1.34
LIG1-209ENST00000596104 IBA57-AS1B1ANH7 110 aa6.65□□□□□ -1.34
LIG1-209ENST00000596104 C9JCJ5 164 aa6.65□□□□□ -1.34
LIG1-209ENST00000596104 PSCAO43653 123 aa6.65□□□□□ -1.34
LIG1-209ENST00000596104 C1QBP02746 253 aa6.65□□□□□ -1.34
LIG1-209ENST00000596104 IL15RAQ13261 267 aa6.65□□□□□ -1.34
LIG1-209ENST00000596104 TMEM183BQ1AE95 376 aa6.65□□□□□ -1.34
LIG1-209ENST00000596104 CNPY1Q3B7I2 92 aa6.65□□□□□ -1.34
LIG1-209ENST00000596104 LINC01556Q5JQF7 62 aa6.65□□□□□ -1.34
LIG1-209ENST00000596104 Q6AWC8 147 aa6.65□□□□□ -1.34
LIG1-209ENST00000596104 Q6ZSA8 131 aa6.65□□□□□ -1.34
LIG1-209ENST00000596104 TMEM183AQ8IXX5 376 aa6.65□□□□□ -1.34
LIG1-209ENST00000596104 FXYD5Q96DB9 178 aa6.65□□□□□ -1.34
LIG1-209ENST00000596104 PHYHIPLQ96FC7 376 aa6.65□□□□□ -1.34
LIG1-209ENST00000596104 C2orf50Q96LR7 162 aa6.65□□□□□ -1.34
LIG1-209ENST00000596104 NPCDR1Q9BY65 106 aa6.65□□□□□ -1.34
LIG1-209ENST00000596104 GPN1Q9HCN4 374 aaPredicted RBP6.65□□□□□ -1.34
LIG1-209ENST00000596104 TRGV11A0A075B6L2 103 aa6.64□□□□□ -1.35
LIG1-209ENST00000596104 RBAKDNA6NC62 111 aa6.64□□□□□ -1.35
LIG1-209ENST00000596104 C5orf51A6NDU8 294 aa6.64□□□□□ -1.35
LIG1-209ENST00000596104 CENPXA8MT69 81 aa6.64□□□□□ -1.35
LIG1-209ENST00000596104 FAM25EA8MYX2 175 aa6.64□□□□□ -1.35
LIG1-209ENST00000596104 PVALBP20472 110 aaPredicted RBP6.64□□□□□ -1.35
LIG1-209ENST00000596104 HBG1P69891 147 aa6.64□□□□□ -1.35
LIG1-209ENST00000596104 HBG2P69892 147 aa6.64□□□□□ -1.35
LIG1-209ENST00000596104 ATP6V1FQ16864 119 aa6.64□□□□□ -1.35
LIG1-209ENST00000596104 STX12Q86Y82 276 aa6.64□□□□□ -1.35
LIG1-209ENST00000596104 SLC25A31Q9H0C2 315 aa6.64□□□□□ -1.35
LIG1-209ENST00000596104 RBM38Q9H0Z9 239 aaKnown RBP6.64□□□□□ -1.35
LIG1-209ENST00000596104 OR51M1Q9H341 326 aa6.64□□□□□ -1.35
LIG1-209ENST00000596104 PLA2G10O15496 165 aa6.63□□□□□ -1.35
LIG1-209ENST00000596104 OR10J4P0C629 311 aa6.63□□□□□ -1.35
LIG1-209ENST00000596104 IL7P13232 177 aa6.63□□□□□ -1.35
LIG1-209ENST00000596104 GATA1P15976 413 aaPredicted RBP6.63□□□□□ -1.35
LIG1-209ENST00000596104 S100A10P60903 97 aa6.63□□□□□ -1.35
LIG1-209ENST00000596104 RAB32Q13637 225 aa6.63□□□□□ -1.35
LIG1-209ENST00000596104 WFDC2Q14508 124 aa6.63□□□□□ -1.35
LIG1-209ENST00000596104 TDRG1Q3Y452 100 aa6.63□□□□□ -1.35
LIG1-209ENST00000596104 SH2D6Q7Z4S9 175 aa6.63□□□□□ -1.35
LIG1-209ENST00000596104 OR4C5Q8NGB2 326 aa6.63□□□□□ -1.35
LIG1-209ENST00000596104 DNAH8Q96JB1 4490 aa6.63□□□□□ -1.35
LIG1-209ENST00000596104 SEC22CQ9BRL7 303 aa6.63□□□□□ -1.35
LIG1-209ENST00000596104 PAXXQ9BUH6 204 aa6.63□□□□□ -1.35
LIG1-209ENST00000596104 LENEPQ9Y5L5 61 aa6.63□□□□□ -1.35
LIG1-209ENST00000596104 IGHV3-16A0A0C4DH30 117 aa6.62□□□□□ -1.35
LIG1-209ENST00000596104 CCDC160A6NGH7 325 aa6.62□□□□□ -1.35
LIG1-209ENST00000596104 M0R2P5 195 aa6.62□□□□□ -1.35
LIG1-209ENST00000596104 PLA2G1BP04054 148 aaKnown RBP6.62□□□□□ -1.35
LIG1-209ENST00000596104 PPT1P50897 306 aa6.62□□□□□ -1.35
LIG1-209ENST00000596104 FAM159AQ6UWV7 190 aa6.62□□□□□ -1.35
LIG1-209ENST00000596104 LINC00528Q8N1L1 170 aa6.62□□□□□ -1.35
LIG1-209ENST00000596104 NHLRC2Q8NBF2 726 aa6.62□□□□□ -1.35
LIG1-209ENST00000596104 THAP6Q8TBB0 222 aa6.62□□□□□ -1.35
LIG1-209ENST00000596104 Q9HAA7 133 aa6.62□□□□□ -1.35
LIG1-209ENST00000596104 DIRC3C9JPN6 131 aa6.61□□□□□ -1.35
LIG1-209ENST00000596104 GNRH2O43555 120 aa6.61□□□□□ -1.35
LIG1-209ENST00000596104 TCRBP04435 133 aa6.61□□□□□ -1.35
LIG1-209ENST00000596104 CSN1S1P47710 185 aa6.61□□□□□ -1.35
LIG1-209ENST00000596104 RANP62826 216 aaKnown RBP6.61□□□□□ -1.35
LIG1-209ENST00000596104 NHLH2Q02577 135 aa6.61□□□□□ -1.35
LIG1-209ENST00000596104 DEFB104AQ8WTQ1 72 aa6.61□□□□□ -1.35
LIG1-209ENST00000596104 TRAV6A0A075B6T7 132 aa6.6□□□□□ -1.35
LIG1-209ENST00000596104 TRAV8-6A0A0B4J262 113 aa6.6□□□□□ -1.35
LIG1-209ENST00000596104 LYRM1O43325 122 aa6.6□□□□□ -1.35
LIG1-209ENST00000596104 IGHV3-30P01768 117 aa6.6□□□□□ -1.35
LIG1-209ENST00000596104 IGHV3-33P01772 117 aa6.6□□□□□ -1.35
LIG1-209ENST00000596104 PFN1P07737 140 aaKnown RBP6.6□□□□□ -1.35
LIG1-209ENST00000596104 IGHV3-30-3P0DP02 117 aa6.6□□□□□ -1.35
LIG1-209ENST00000596104 IGHV3-30-5P0DP03 117 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms