RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 RBMY1BA6NDE4 496 aaKnown RBP10.89□□□□□ -0.67
SHKBP1-211ENST00000595945 RBMY1EA6NEQ0 496 aaKnown RBP10.89□□□□□ -0.67
SHKBP1-211ENST00000595945 RBMY1DP0C7P1 496 aaKnown RBP10.89□□□□□ -0.67
SHKBP1-211ENST00000595945 ZNF80P51504 273 aaPredicted RBP10.89□□□□□ -0.67
SHKBP1-211ENST00000595945 PRR9Q5T870 116 aa10.89□□□□□ -0.67
SHKBP1-211ENST00000595945 NUDT10Q8NFP7 164 aa10.89□□□□□ -0.67
SHKBP1-211ENST00000595945 ANAPC16Q96DE5 110 aa10.89□□□□□ -0.67
SHKBP1-211ENST00000595945 NUDT11Q96G61 164 aa10.89□□□□□ -0.67
SHKBP1-211ENST00000595945 RPS10P5Q9NQ39 176 aa10.89□□□□□ -0.67
SHKBP1-211ENST00000595945 KLLNB2CW77 178 aa10.88□□□□□ -0.67
SHKBP1-211ENST00000595945 PPP1R2P9O14990 202 aa10.88□□□□□ -0.67
SHKBP1-211ENST00000595945 LEPP41159 167 aa10.88□□□□□ -0.67
SHKBP1-211ENST00000595945 PRR27Q6MZM9 219 aa10.88□□□□□ -0.67
SHKBP1-211ENST00000595945 OR10G8Q8NGN5 311 aa10.88□□□□□ -0.67
SHKBP1-211ENST00000595945 RNASE7Q9H1E1 156 aaKnown RBP10.88□□□□□ -0.67
SHKBP1-211ENST00000595945 TMEM242Q9NWH2 141 aa10.88□□□□□ -0.67
SHKBP1-211ENST00000595945 V9GYV3 84 aa10.88□□□□□ -0.67
SHKBP1-211ENST00000595945 SH2D1AO60880 128 aa10.87□□□□□ -0.67
SHKBP1-211ENST00000595945 SCO1O75880 301 aa10.87□□□□□ -0.67
SHKBP1-211ENST00000595945 ERVFC1-1P60608 527 aa10.87□□□□□ -0.67
SHKBP1-211ENST00000595945 IBA57Q5T440 356 aaKnown RBP10.87□□□□□ -0.67
SHKBP1-211ENST00000595945 FAM162BQ5T6X4 162 aa10.87□□□□□ -0.67
SHKBP1-211ENST00000595945 TRPT1Q86TN4 253 aaKnown RBP10.87□□□□□ -0.67
SHKBP1-211ENST00000595945 OR4B1Q8NGF8 309 aa10.87□□□□□ -0.67
SHKBP1-211ENST00000595945 H7BYZ3 331 aa10.86□□□□□ -0.67
SHKBP1-211ENST00000595945 EGFEM1PQ0D2K5 195 aa10.86□□□□□ -0.67
SHKBP1-211ENST00000595945 Q6AWC8 147 aa10.86□□□□□ -0.67
SHKBP1-211ENST00000595945 C15orf54Q8N8G6 183 aa10.86□□□□□ -0.67
SHKBP1-211ENST00000595945 WFDC10AQ9H1F0 79 aa10.86□□□□□ -0.67
SHKBP1-211ENST00000595945 GATCO43716 136 aaKnown RBP10.85□□□□□ -0.67
SHKBP1-211ENST00000595945 IGKV3-20P01619 116 aa10.85□□□□□ -0.67
SHKBP1-211ENST00000595945 PFN1P07737 140 aaKnown RBP10.85□□□□□ -0.67
SHKBP1-211ENST00000595945 TSPOP30536 169 aa10.85□□□□□ -0.67
SHKBP1-211ENST00000595945 KIR3DS1Q14943 382 aa10.85□□□□□ -0.67
SHKBP1-211ENST00000595945 KRTAP21-3Q3LHN1 58 aa10.85□□□□□ -0.67
SHKBP1-211ENST00000595945 OXLD1Q5BKU9 147 aa10.85□□□□□ -0.67
SHKBP1-211ENST00000595945 Q8N1Y9 231 aa10.85□□□□□ -0.67
SHKBP1-211ENST00000595945 CXorf65A6NEN9 183 aa10.84□□□□□ -0.67
SHKBP1-211ENST00000595945 FABP5P3A8MUU1 101 aa10.84□□□□□ -0.67
SHKBP1-211ENST00000595945 P01737 135 aa10.84□□□□□ -0.67
SHKBP1-211ENST00000595945 GPX1P07203 203 aa10.84□□□□□ -0.67
SHKBP1-211ENST00000595945 CDKN1BP46527 198 aa10.84□□□□□ -0.67
SHKBP1-211ENST00000595945 BTN1A1Q13410 526 aa10.84□□□□□ -0.67
SHKBP1-211ENST00000595945 CT83Q5H943 113 aa10.84□□□□□ -0.67
SHKBP1-211ENST00000595945 GTSCR1Q86UQ5 136 aa10.84□□□□□ -0.67
SHKBP1-211ENST00000595945 CBLN2Q8IUK8 224 aa10.84□□□□□ -0.67
SHKBP1-211ENST00000595945 DAZAP1Q96EP5 407 aaKnown RBP10.84□□□□□ -0.67
SHKBP1-211ENST00000595945 RPP21Q9H633 154 aaKnown RBP10.84□□□□□ -0.67
SHKBP1-211ENST00000595945 TUBA4BQ9H853 241 aa10.84□□□□□ -0.67
SHKBP1-211ENST00000595945 C11orf21Q9P2W6 132 aa10.84□□□□□ -0.67
SHKBP1-211ENST00000595945 C7orf71A4D174 169 aa10.83□□□□□ -0.68
SHKBP1-211ENST00000595945 ZNF705GA8MUZ8 300 aaPredicted RBP10.83□□□□□ -0.68
SHKBP1-211ENST00000595945 M0R2Z0 102 aa10.83□□□□□ -0.68
SHKBP1-211ENST00000595945 CRXO43186 299 aaPredicted RBP10.83□□□□□ -0.68
SHKBP1-211ENST00000595945 SPINK13Q1W4C9 94 aa10.83□□□□□ -0.68
SHKBP1-211ENST00000595945 GFI1BQ5VTD9 330 aa10.83□□□□□ -0.68
SHKBP1-211ENST00000595945 Q6ZQT7 251 aa10.83□□□□□ -0.68
SHKBP1-211ENST00000595945 ZNF575Q86XF7 245 aa10.83□□□□□ -0.68
SHKBP1-211ENST00000595945 STHQ8IWL8 128 aa10.83□□□□□ -0.68
SHKBP1-211ENST00000595945 DEFB125Q8N687 156 aa10.83□□□□□ -0.68
SHKBP1-211ENST00000595945 YPEL4Q96NS1 127 aa10.83□□□□□ -0.68
SHKBP1-211ENST00000595945 SMCO4Q9NRQ5 59 aa10.83□□□□□ -0.68
SHKBP1-211ENST00000595945 DNAH3Q8TD57 4116 aa10.82□□□□□ -0.68
SHKBP1-211ENST00000595945 TRAV21A0A0B4J279 112 aa10.82□□□□□ -0.68
SHKBP1-211ENST00000595945 J3KRW8 73 aa10.82□□□□□ -0.68
SHKBP1-211ENST00000595945 ZNF324O75467 553 aaPredicted RBP10.82□□□□□ -0.68
SHKBP1-211ENST00000595945 RNASE4P34096 147 aaKnown RBP10.82□□□□□ -0.68
SHKBP1-211ENST00000595945 KRTAP10-11P60412 298 aa10.82□□□□□ -0.68
SHKBP1-211ENST00000595945 LINC01559Q495D7 138 aa10.82□□□□□ -0.68
SHKBP1-211ENST00000595945 SAMD5Q5TGI4 173 aa10.82□□□□□ -0.68
SHKBP1-211ENST00000595945 TMEM88Q6PEY1 159 aa10.82□□□□□ -0.68
SHKBP1-211ENST00000595945 IMMP2LQ96T52 175 aa10.82□□□□□ -0.68
SHKBP1-211ENST00000595945 IL36BQ9NZH7 164 aa10.82□□□□□ -0.68
SHKBP1-211ENST00000595945 SMIM27A0A1W2PRY6 76 aa10.81□□□□□ -0.68
SHKBP1-211ENST00000595945 AMBPP02760 352 aa10.81□□□□□ -0.68
SHKBP1-211ENST00000595945 FXYD7P58549 80 aa10.81□□□□□ -0.68
SHKBP1-211ENST00000595945 OR2D3Q8NGH3 330 aa10.81□□□□□ -0.68
SHKBP1-211ENST00000595945 TRAV12-2A0A075B6T6 113 aa10.8□□□□□ -0.68
SHKBP1-211ENST00000595945 IGKV3D-20A0A0C4DH25 116 aa10.8□□□□□ -0.68
SHKBP1-211ENST00000595945 TMEM189A5PLL7 270 aa10.8□□□□□ -0.68
SHKBP1-211ENST00000595945 A8MWL6 223 aa10.8□□□□□ -0.68
SHKBP1-211ENST00000595945 CA1P00915 261 aaPredicted RBP10.8□□□□□ -0.68
SHKBP1-211ENST00000595945 GIG44P09565 113 aaPredicted RBP10.8□□□□□ -0.68
SHKBP1-211ENST00000595945 RPL19P84098 196 aaKnown RBP10.8□□□□□ -0.68
SHKBP1-211ENST00000595945 TSKUQ8WUA8 353 aa10.8□□□□□ -0.68
SHKBP1-211ENST00000595945 ZMAT5Q9UDW3 170 aaKnown RBP10.8□□□□□ -0.68
SHKBP1-211ENST00000595945 FAM231BA6NCW3 169 aa10.79□□□□□ -0.68
SHKBP1-211ENST00000595945 G3V4G9 280 aa10.79□□□□□ -0.68
SHKBP1-211ENST00000595945 CXCL1P09341 107 aa10.79□□□□□ -0.68
SHKBP1-211ENST00000595945 RBMY1A1P0DJD3 496 aaKnown RBP10.79□□□□□ -0.68
SHKBP1-211ENST00000595945 RBMY1CP0DJD4 496 aa10.79□□□□□ -0.68
SHKBP1-211ENST00000595945 RPS20P60866 119 aaKnown RBP10.79□□□□□ -0.68
SHKBP1-211ENST00000595945 RBMY1FQ15415 496 aaKnown RBP10.79□□□□□ -0.68
SHKBP1-211ENST00000595945 GFRA4Q9GZZ7 299 aa10.79□□□□□ -0.68
SHKBP1-211ENST00000595945 SRD5A3Q9H8P0 318 aa10.79□□□□□ -0.68
SHKBP1-211ENST00000595945 TRAV12-3A0A0B4J271 114 aa10.78□□□□□ -0.68
SHKBP1-211ENST00000595945 ORM1P02763 201 aa10.78□□□□□ -0.68
SHKBP1-211ENST00000595945 FOXA3P55318 350 aaPredicted RBP10.78□□□□□ -0.68
SHKBP1-211ENST00000595945 ELOBQ15370 118 aa10.78□□□□□ -0.68
SHKBP1-211ENST00000595945 MORN3Q6PF18 240 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms