RNA–Protein interactions for RNA: ENST00000595343.5

PDE4C-208, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best)

Gene PDE4C, Length 420 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-208ENST00000595343 ATP5SQ99766 215 aa12.76□□□□□ -0.37
PDE4C-208ENST00000595343 SMIM3Q9BZL3 60 aa12.76□□□□□ -0.37
PDE4C-208ENST00000595343 WFDC1Q9HC57 220 aa12.76□□□□□ -0.37
PDE4C-208ENST00000595343 TRGV2A0A075B6R0 118 aa12.75□□□□□ -0.37
PDE4C-208ENST00000595343 NPIPB6E9PJ23 425 aa12.75□□□□□ -0.37
PDE4C-208ENST00000595343 H3BQ15 152 aa12.75□□□□□ -0.37
PDE4C-208ENST00000595343 BLOC1S1P78537 153 aa12.75□□□□□ -0.37
PDE4C-208ENST00000595343 ATP6V1FQ16864 119 aa12.75□□□□□ -0.37
PDE4C-208ENST00000595343 FAM74A1Q5RGS3 127 aa12.75□□□□□ -0.37
PDE4C-208ENST00000595343 C18orf15Q96N68 181 aa12.75□□□□□ -0.37
PDE4C-208ENST00000595343 GSN-AS1Q9NRJ2 163 aa12.75□□□□□ -0.37
PDE4C-208ENST00000595343 FAT1Q14517 4588 aa12.75□□□□□ -0.37
PDE4C-208ENST00000595343 EREGO14944 169 aa12.74□□□□□ -0.37
PDE4C-208ENST00000595343 ARL16Q0P5N6 197 aa12.74□□□□□ -0.37
PDE4C-208ENST00000595343 CDPF1Q6NVV7 123 aa12.74□□□□□ -0.37
PDE4C-208ENST00000595343 C11orf72Q8NBR9 251 aa12.74□□□□□ -0.37
PDE4C-208ENST00000595343 UMAD1C9J7I0 102 aa12.73□□□□□ -0.37
PDE4C-208ENST00000595343 CST7O76096 145 aa12.73□□□□□ -0.37
PDE4C-208ENST00000595343 NXPH4O95158 308 aa12.73□□□□□ -0.37
PDE4C-208ENST00000595343 IFNA5P01569 189 aa12.73□□□□□ -0.37
PDE4C-208ENST00000595343 ERVFC1-1P60608 527 aa12.73□□□□□ -0.37
PDE4C-208ENST00000595343 C10orf113Q5VZT2 155 aa12.73□□□□□ -0.37
PDE4C-208ENST00000595343 PCNPQ8WW12 178 aaKnown RBP12.73□□□□□ -0.37
PDE4C-208ENST00000595343 MGST2Q99735 147 aa12.73□□□□□ -0.37
PDE4C-208ENST00000595343 GGACTQ9BVM4 153 aa12.73□□□□□ -0.37
PDE4C-208ENST00000595343 FUT9Q9Y231 359 aa12.73□□□□□ -0.37
PDE4C-208ENST00000595343 TRGV1A0A0A0MS02 117 aa12.72□□□□□ -0.37
PDE4C-208ENST00000595343 RAB19A4D1S5 217 aa12.72□□□□□ -0.37
PDE4C-208ENST00000595343 GUK1Q16774 197 aa12.72□□□□□ -0.37
PDE4C-208ENST00000595343 TNFRSF18Q9Y5U5 241 aa12.72□□□□□ -0.37
PDE4C-208ENST00000595343 TRAV5A0A0B4J249 113 aa12.71□□□□□ -0.37
PDE4C-208ENST00000595343 C7orf71A4D174 169 aa12.71□□□□□ -0.37
PDE4C-208ENST00000595343 SLC25A5P05141 298 aaKnown RBP12.71□□□□□ -0.37
PDE4C-208ENST00000595343 Q5VSD8 79 aa12.71□□□□□ -0.37
PDE4C-208ENST00000595343 UQCC3Q6UW78 93 aa12.71□□□□□ -0.37
PDE4C-208ENST00000595343 PSMG3Q9BT73 122 aaPredicted RBP12.71□□□□□ -0.37
PDE4C-208ENST00000595343 DNAJC4Q9NNZ3 241 aa12.71□□□□□ -0.37
PDE4C-208ENST00000595343 ICOSQ9Y6W8 199 aa12.71□□□□□ -0.37
PDE4C-208ENST00000595343 PAX4O43316 350 aa12.7□□□□□ -0.38
PDE4C-208ENST00000595343 ZNF324O75467 553 aaPredicted RBP12.7□□□□□ -0.38
PDE4C-208ENST00000595343 ATP6V0CP27449 155 aa12.7□□□□□ -0.38
PDE4C-208ENST00000595343 DPPA3Q6W0C5 159 aa12.7□□□□□ -0.38
PDE4C-208ENST00000595343 LYPD6BQ8NI32 183 aa12.7□□□□□ -0.38
PDE4C-208ENST00000595343 LINC00467Q9BRT7 94 aa12.7□□□□□ -0.38
PDE4C-208ENST00000595343 DNAH10OSP0CZ25 163 aa12.69□□□□□ -0.38
PDE4C-208ENST00000595343 CAMLGP49069 296 aa12.69□□□□□ -0.38
PDE4C-208ENST00000595343 KRTAP10-1P60331 282 aa12.69□□□□□ -0.38
PDE4C-208ENST00000595343 VWC2Q2TAL6 325 aa12.69□□□□□ -0.38
PDE4C-208ENST00000595343 ANXA2RQ3ZCQ2 193 aa12.69□□□□□ -0.38
PDE4C-208ENST00000595343 HSD17B11Q8NBQ5 300 aa12.69□□□□□ -0.38
PDE4C-208ENST00000595343 SCGB1C1Q8TD33 95 aa12.69□□□□□ -0.38
PDE4C-208ENST00000595343 FRZBQ92765 325 aa12.69□□□□□ -0.38
PDE4C-208ENST00000595343 KLF12Q9Y4X4 402 aa12.69□□□□□ -0.38
PDE4C-208ENST00000595343 TIMM9Q9Y5J7 89 aa12.69□□□□□ -0.38
PDE4C-208ENST00000595343 FLG2Q5D862 2391 aaPredicted RBP12.68□□□□□ -0.38
PDE4C-208ENST00000595343 KLLNB2CW77 178 aa12.68□□□□□ -0.38
PDE4C-208ENST00000595343 KRBOX1C9JBD0 128 aa12.68□□□□□ -0.38
PDE4C-208ENST00000595343 TEX46H3BTG2 121 aa12.68□□□□□ -0.38
PDE4C-208ENST00000595343 SPINK4O60575 86 aa12.68□□□□□ -0.38
PDE4C-208ENST00000595343 ZNF253O75346 499 aa12.68□□□□□ -0.38
PDE4C-208ENST00000595343 TCL1AP56279 114 aa12.68□□□□□ -0.38
PDE4C-208ENST00000595343 SERF2P84101 59 aa12.68□□□□□ -0.38
PDE4C-208ENST00000595343 ERCC8Q13216 396 aa12.68□□□□□ -0.38
PDE4C-208ENST00000595343 BTN1A1Q13410 526 aa12.68□□□□□ -0.38
PDE4C-208ENST00000595343 Q6ZRG5 221 aa12.68□□□□□ -0.38
PDE4C-208ENST00000595343 NFE4Q86UQ8 179 aa12.68□□□□□ -0.38
PDE4C-208ENST00000595343 MRPL53Q96EL3 112 aaKnown RBP12.68□□□□□ -0.38
PDE4C-208ENST00000595343 MYCBP2O75592 4640 aa12.67□□□□□ -0.38
PDE4C-208ENST00000595343 A0A087WTM6 91 aa12.67□□□□□ -0.38
PDE4C-208ENST00000595343 M0R3E3 92 aa12.67□□□□□ -0.38
PDE4C-208ENST00000595343 IGHV3-53P01767 116 aa12.67□□□□□ -0.38
PDE4C-208ENST00000595343 RAB31Q13636 194 aa12.67□□□□□ -0.38
PDE4C-208ENST00000595343 MIC13Q5XKP0 118 aa12.67□□□□□ -0.38
PDE4C-208ENST00000595343 OR2G3Q8NGZ4 309 aa12.67□□□□□ -0.38
PDE4C-208ENST00000595343 FAM19A4Q96LR4 140 aa12.67□□□□□ -0.38
PDE4C-208ENST00000595343 WDR61Q9GZS3 305 aaKnown RBP12.67□□□□□ -0.38
PDE4C-208ENST00000595343 RNASE4P34096 147 aaKnown RBP12.66□□□□□ -0.38
PDE4C-208ENST00000595343 TOR2AQ5JU69 321 aa12.66□□□□□ -0.38
PDE4C-208ENST00000595343 LYPD5Q6UWN5 251 aa12.66□□□□□ -0.38
PDE4C-208ENST00000595343 OR1L4Q8NGR5 311 aa12.66□□□□□ -0.38
PDE4C-208ENST00000595343 AGPAT4-IT1Q9H0P7 198 aa12.66□□□□□ -0.38
PDE4C-208ENST00000595343 UQCC1Q9NVA1 299 aa12.66□□□□□ -0.38
PDE4C-208ENST00000595343 PRO0255Q9UI72 69 aa12.66□□□□□ -0.38
PDE4C-208ENST00000595343 SRRM2Q9UQ35 2752 aaKnown RBP12.66□□□□□ -0.38
PDE4C-208ENST00000595343 TRBV19A0A075B6N1 114 aa12.65□□□□□ -0.38
PDE4C-208ENST00000595343 MPDU1O75352 247 aa12.65□□□□□ -0.38
PDE4C-208ENST00000595343 IBA57Q5T440 356 aaKnown RBP12.65□□□□□ -0.38
PDE4C-208ENST00000595343 LINC00477Q96M19 166 aa12.65□□□□□ -0.38
PDE4C-208ENST00000595343 PFDN5Q99471 154 aa12.65□□□□□ -0.38
PDE4C-208ENST00000595343 SH3BGRL3Q9H299 93 aa12.65□□□□□ -0.38
PDE4C-208ENST00000595343 TRAV9-2A0A087WT02 112 aa12.64□□□□□ -0.39
PDE4C-208ENST00000595343 NDUFB4O95168 129 aa12.64□□□□□ -0.39
PDE4C-208ENST00000595343 GPX1P07203 203 aa12.64□□□□□ -0.39
PDE4C-208ENST00000595343 CRISP2P16562 243 aa12.64□□□□□ -0.39
PDE4C-208ENST00000595343 CRYBA4P53673 196 aa12.64□□□□□ -0.39
PDE4C-208ENST00000595343 SLAQ13239 276 aa12.64□□□□□ -0.39
PDE4C-208ENST00000595343 ICAM4Q14773 271 aa12.64□□□□□ -0.39
PDE4C-208ENST00000595343 MRPL23Q16540 153 aaKnown RBP12.64□□□□□ -0.39
PDE4C-208ENST00000595343 AKR1C8PQ5T2L2 129 aa12.64□□□□□ -0.39
PDE4C-208ENST00000595343 MRPL16Q9NX20 251 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms