RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 A0A0G2JLM5 398 aa9.53□□□□□ -0.88
SCAF1-202ENST00000595242 IZUMO1RA6ND01 250 aa9.53□□□□□ -0.88
SCAF1-202ENST00000595242 DIRC3C9JPN6 131 aa9.53□□□□□ -0.88
SCAF1-202ENST00000595242 K7EQM0 130 aa9.53□□□□□ -0.88
SCAF1-202ENST00000595242 NDUFA4O00483 81 aa9.53□□□□□ -0.88
SCAF1-202ENST00000595242 HOXA5P20719 270 aa9.53□□□□□ -0.88
SCAF1-202ENST00000595242 MEOX2P50222 304 aa9.53□□□□□ -0.88
SCAF1-202ENST00000595242 COA6Q5JTJ3 125 aaKnown RBP9.53□□□□□ -0.88
SCAF1-202ENST00000595242 OR8I2Q8N0Y5 310 aa9.53□□□□□ -0.88
SCAF1-202ENST00000595242 GRAMD2BQ96HH9 432 aa9.53□□□□□ -0.88
SCAF1-202ENST00000595242 SIGLEC8Q9NYZ4 499 aa9.53□□□□□ -0.88
SCAF1-202ENST00000595242 ZFP30Q9Y2G7 519 aa9.53□□□□□ -0.88
SCAF1-202ENST00000595242 NPIPB6E9PJ23 425 aa9.52□□□□□ -0.89
SCAF1-202ENST00000595242 GATCO43716 136 aaKnown RBP9.52□□□□□ -0.89
SCAF1-202ENST00000595242 ARL3P36405 182 aa9.52□□□□□ -0.89
SCAF1-202ENST00000595242 RPL19P84098 196 aaKnown RBP9.52□□□□□ -0.89
SCAF1-202ENST00000595242 FABP9Q0Z7S8 132 aa9.52□□□□□ -0.89
SCAF1-202ENST00000595242 PSG3Q16557 428 aa9.52□□□□□ -0.89
SCAF1-202ENST00000595242 C16orf54Q6UWD8 224 aa9.52□□□□□ -0.89
SCAF1-202ENST00000595242 GOLT1AQ6ZVE7 132 aa9.52□□□□□ -0.89
SCAF1-202ENST00000595242 COX8CQ7Z4L0 72 aa9.52□□□□□ -0.89
SCAF1-202ENST00000595242 NHLRC2Q8NBF2 726 aa9.52□□□□□ -0.89
SCAF1-202ENST00000595242 NUDT10Q8NFP7 164 aa9.52□□□□□ -0.89
SCAF1-202ENST00000595242 OR9G4Q8NGQ1 327 aa9.52□□□□□ -0.89
SCAF1-202ENST00000595242 NUDT11Q96G61 164 aa9.52□□□□□ -0.89
SCAF1-202ENST00000595242 METTL26Q96S19 204 aa9.52□□□□□ -0.89
SCAF1-202ENST00000595242 SLC50A1Q9BRV3 221 aa9.52□□□□□ -0.89
SCAF1-202ENST00000595242 ZNF331Q9NQX6 463 aaPredicted RBP9.52□□□□□ -0.89
SCAF1-202ENST00000595242 DNAH2Q9P225 4427 aa9.52□□□□□ -0.89
SCAF1-202ENST00000595242 RPH3ALQ9UNE2 315 aa9.52□□□□□ -0.89
SCAF1-202ENST00000595242 S100A8P05109 93 aa9.51□□□□□ -0.89
SCAF1-202ENST00000595242 SMUG1Q53HV7 270 aa9.51□□□□□ -0.89
SCAF1-202ENST00000595242 RASL11AQ6T310 242 aa9.51□□□□□ -0.89
SCAF1-202ENST00000595242 DEFB125Q8N687 156 aa9.51□□□□□ -0.89
SCAF1-202ENST00000595242 OR4B1Q8NGF8 309 aa9.51□□□□□ -0.89
SCAF1-202ENST00000595242 MRPL53Q96EL3 112 aaKnown RBP9.51□□□□□ -0.89
SCAF1-202ENST00000595242 ZNF705GA8MUZ8 300 aaPredicted RBP9.5□□□□□ -0.89
SCAF1-202ENST00000595242 MT-ND6P03923 174 aa9.5□□□□□ -0.89
SCAF1-202ENST00000595242 CSN1S1P47710 185 aa9.5□□□□□ -0.89
SCAF1-202ENST00000595242 KLF5Q13887 457 aaPredicted RBP9.5□□□□□ -0.89
SCAF1-202ENST00000595242 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.5□□□□□ -0.89
SCAF1-202ENST00000595242 TSKUQ8WUA8 353 aa9.5□□□□□ -0.89
SCAF1-202ENST00000595242 OVOL2Q9BRP0 275 aa9.5□□□□□ -0.89
SCAF1-202ENST00000595242 GNB1LQ9BYB4 327 aa9.5□□□□□ -0.89
SCAF1-202ENST00000595242 GFRA4Q9GZZ7 299 aa9.5□□□□□ -0.89
SCAF1-202ENST00000595242 PSG8Q9UQ74 426 aa9.5□□□□□ -0.89
SCAF1-202ENST00000595242 DYNC1H1Q14204 4646 aaKnown RBP9.5□□□□□ -0.89
SCAF1-202ENST00000595242 TRAV8-1A0A0A6YYK1 113 aa9.49□□□□□ -0.89
SCAF1-202ENST00000595242 IGHV3-35A0A0C4DH35 117 aa9.49□□□□□ -0.89
SCAF1-202ENST00000595242 A0A0J9YWU9 116 aa9.49□□□□□ -0.89
SCAF1-202ENST00000595242 RBAKDNA6NC62 111 aa9.49□□□□□ -0.89
SCAF1-202ENST00000595242 FAM231BA6NCW3 169 aa9.49□□□□□ -0.89
SCAF1-202ENST00000595242 M0R3E3 92 aa9.49□□□□□ -0.89
SCAF1-202ENST00000595242 NDUFA6P56556 154 aa9.49□□□□□ -0.89
SCAF1-202ENST00000595242 WDR73Q6P4I2 378 aa9.49□□□□□ -0.89
SCAF1-202ENST00000595242 GLMPQ8WWB7 406 aa9.49□□□□□ -0.89
SCAF1-202ENST00000595242 WFDC10AQ9H1F0 79 aa9.49□□□□□ -0.89
SCAF1-202ENST00000595242 RPP21Q9H633 154 aaKnown RBP9.49□□□□□ -0.89
SCAF1-202ENST00000595242 CLEC5AQ9NY25 188 aa9.49□□□□□ -0.89
SCAF1-202ENST00000595242 TRAPPC1Q9Y5R8 145 aa9.49□□□□□ -0.89
SCAF1-202ENST00000595242 ZNF785A8K8V0 405 aa9.48□□□□□ -0.89
SCAF1-202ENST00000595242 TRBV12-3P01733 135 aa9.48□□□□□ -0.89
SCAF1-202ENST00000595242 CSN3P07498 182 aa9.48□□□□□ -0.89
SCAF1-202ENST00000595242 CD7P09564 240 aa9.48□□□□□ -0.89
SCAF1-202ENST00000595242 SYNJ2BPP57105 145 aa9.48□□□□□ -0.89
SCAF1-202ENST00000595242 PRNTQ86SH4 94 aa9.48□□□□□ -0.89
SCAF1-202ENST00000595242 LINC00518Q8N0U6 118 aa9.48□□□□□ -0.89
SCAF1-202ENST00000595242 SGK494Q96LW2 274 aa9.48□□□□□ -0.89
SCAF1-202ENST00000595242 NAT8BQ9UHF3 227 aa9.48□□□□□ -0.89
SCAF1-202ENST00000595242 A0A1B0GVY2 172 aa9.47□□□□□ -0.89
SCAF1-202ENST00000595242 A8MWL6 223 aa9.47□□□□□ -0.89
SCAF1-202ENST00000595242 OR11H12B2RN74 326 aa9.47□□□□□ -0.89
SCAF1-202ENST00000595242 CHEK1O14757 476 aa9.47□□□□□ -0.89
SCAF1-202ENST00000595242 P01737 135 aa9.47□□□□□ -0.89
SCAF1-202ENST00000595242 APOHP02749 345 aaPredicted RBP9.47□□□□□ -0.89
SCAF1-202ENST00000595242 PRR27Q6MZM9 219 aa9.47□□□□□ -0.89
SCAF1-202ENST00000595242 ATP5L2Q7Z4Y8 100 aa9.47□□□□□ -0.89
SCAF1-202ENST00000595242 HIST3H2BBQ8N257 126 aa9.47□□□□□ -0.89
SCAF1-202ENST00000595242 GBGT1Q8N5D6 347 aa9.47□□□□□ -0.89
SCAF1-202ENST00000595242 PKD1P98161 4303 aa9.47□□□□□ -0.89
SCAF1-202ENST00000595242 DNAH17Q9UFH2 4485 aa9.46□□□□□ -0.89
SCAF1-202ENST00000595242 IGHV3OR16-8A0A075B7F1 116 aa9.46□□□□□ -0.9
SCAF1-202ENST00000595242 IFITM10A6NMD0 228 aa9.46□□□□□ -0.9
SCAF1-202ENST00000595242 K7EMT4 169 aa9.46□□□□□ -0.9
SCAF1-202ENST00000595242 HLA-DQA1P01909 254 aa9.46□□□□□ -0.9
SCAF1-202ENST00000595242 AKR1D1P51857 326 aa9.46□□□□□ -0.9
SCAF1-202ENST00000595242 SAPCD1Q5SSQ6 148 aa9.46□□□□□ -0.9
SCAF1-202ENST00000595242 UNQ9165/PRO28630Q6UXU0 137 aa9.46□□□□□ -0.9
SCAF1-202ENST00000595242 TMEM136Q6ZRR5 245 aa9.46□□□□□ -0.9
SCAF1-202ENST00000595242 ZC2HC1AQ96GY0 325 aa9.46□□□□□ -0.9
SCAF1-202ENST00000595242 NEU1Q99519 415 aa9.46□□□□□ -0.9
SCAF1-202ENST00000595242 TRAV8-2A0A0B4J237 113 aa9.45□□□□□ -0.9
SCAF1-202ENST00000595242 A0A1B0GXF2 115 aa9.45□□□□□ -0.9
SCAF1-202ENST00000595242 A0A1W2PS18 150 aa9.45□□□□□ -0.9
SCAF1-202ENST00000595242 CA1P00915 261 aaPredicted RBP9.45□□□□□ -0.9
SCAF1-202ENST00000595242 SMIM6P0DI80 62 aa9.45□□□□□ -0.9
SCAF1-202ENST00000595242 CBLN1P23435 193 aa9.45□□□□□ -0.9
SCAF1-202ENST00000595242 FOXA3P55318 350 aaPredicted RBP9.45□□□□□ -0.9
SCAF1-202ENST00000595242 TCL1AP56279 114 aa9.45□□□□□ -0.9
SCAF1-202ENST00000595242 LINC00336Q6ZUF6 198 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms