RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 SORL1Q92673 2214 aa11.34□□□□□ -0.59
VRK3-207ENST00000594092 SH2D1AO60880 128 aa11.33□□□□□ -0.6
VRK3-207ENST00000594092 HIST1H1AQ02539 215 aaPredicted RBP11.33□□□□□ -0.6
VRK3-207ENST00000594092 LINC00477Q96M19 166 aa11.33□□□□□ -0.6
VRK3-207ENST00000594092 FAM231BA6NCW3 169 aa11.32□□□□□ -0.6
VRK3-207ENST00000594092 HIGD1CA8MV81 97 aa11.32□□□□□ -0.6
VRK3-207ENST00000594092 IGLV1-51P01701 117 aa11.32□□□□□ -0.6
VRK3-207ENST00000594092 ZNF747Q9BV97 191 aa11.32□□□□□ -0.6
VRK3-207ENST00000594092 ZNF256Q9Y2P7 627 aaPredicted RBP11.32□□□□□ -0.6
VRK3-207ENST00000594092 LENEPQ9Y5L5 61 aa11.32□□□□□ -0.6
VRK3-207ENST00000594092 OR4C46A6NHA9 309 aa11.32□□□□□ -0.6
VRK3-207ENST00000594092 SPINK4O60575 86 aa11.32□□□□□ -0.6
VRK3-207ENST00000594092 S100A6P06703 90 aa11.32□□□□□ -0.6
VRK3-207ENST00000594092 COX19Q49B96 90 aa11.32□□□□□ -0.6
VRK3-207ENST00000594092 ACTL10Q5JWF8 245 aa11.32□□□□□ -0.6
VRK3-207ENST00000594092 GDF5OSQ5U4N7 250 aa11.32□□□□□ -0.6
VRK3-207ENST00000594092 NUP35Q8NFH5 326 aa11.32□□□□□ -0.6
VRK3-207ENST00000594092 TRAPPC1Q9Y5R8 145 aa11.32□□□□□ -0.6
VRK3-207ENST00000594092 VWFP04275 2813 aa11.32□□□□□ -0.6
VRK3-207ENST00000594092 MRPL54Q6P161 138 aaKnown RBP11.31□□□□□ -0.6
VRK3-207ENST00000594092 SPATA3Q8NHX4 192 aa11.31□□□□□ -0.6
VRK3-207ENST00000594092 A0A0J9YX75 114 aa11.3□□□□□ -0.6
VRK3-207ENST00000594092 XKRY2A2RUG3 117 aa11.3□□□□□ -0.6
VRK3-207ENST00000594092 TMEM189A5PLL7 270 aa11.3□□□□□ -0.6
VRK3-207ENST00000594092 FABP5P3A8MUU1 101 aa11.3□□□□□ -0.6
VRK3-207ENST00000594092 CD33P20138 364 aa11.3□□□□□ -0.6
VRK3-207ENST00000594092 ZNF80P51504 273 aaPredicted RBP11.3□□□□□ -0.6
VRK3-207ENST00000594092 DEFB131AP59861 70 aa11.3□□□□□ -0.6
VRK3-207ENST00000594092 FABP9Q0Z7S8 132 aa11.3□□□□□ -0.6
VRK3-207ENST00000594092 WDR73Q6P4I2 378 aa11.3□□□□□ -0.6
VRK3-207ENST00000594092 FRZBQ92765 325 aa11.3□□□□□ -0.6
VRK3-207ENST00000594092 PHOX2AO14813 284 aa11.3□□□□□ -0.6
VRK3-207ENST00000594092 RASL11AQ6T310 242 aa11.3□□□□□ -0.6
VRK3-207ENST00000594092 OR2K2Q8NGT1 345 aa11.3□□□□□ -0.6
VRK3-207ENST00000594092 GTSF1Q8WW33 167 aa11.3□□□□□ -0.6
VRK3-207ENST00000594092 TRGC1P0CF51 173 aa11.29□□□□□ -0.6
VRK3-207ENST00000594092 GZMBP10144 247 aa11.29□□□□□ -0.6
VRK3-207ENST00000594092 EBLN2Q6P2I7 272 aa11.29□□□□□ -0.6
VRK3-207ENST00000594092 FOXI2Q6ZQN5 318 aa11.29□□□□□ -0.6
VRK3-207ENST00000594092 ATP5L2Q7Z4Y8 100 aa11.29□□□□□ -0.6
VRK3-207ENST00000594092 C3orf56Q8N813 242 aa11.29□□□□□ -0.6
VRK3-207ENST00000594092 TMEM158Q8WZ71 300 aa11.29□□□□□ -0.6
VRK3-207ENST00000594092 FAM19A4Q96LR4 140 aa11.29□□□□□ -0.6
VRK3-207ENST00000594092 GNB1LQ9BYB4 327 aa11.29□□□□□ -0.6
VRK3-207ENST00000594092 SAV1Q9H4B6 383 aaPredicted RBP11.29□□□□□ -0.6
VRK3-207ENST00000594092 MAP6D1Q9H9H5 199 aa11.29□□□□□ -0.6
VRK3-207ENST00000594092 SNURFLB1AK76 121 aa11.28□□□□□ -0.6
VRK3-207ENST00000594092 HIST1H2BKO60814 126 aa11.28□□□□□ -0.6
VRK3-207ENST00000594092 MT-ND6P03923 174 aa11.28□□□□□ -0.6
VRK3-207ENST00000594092 HIST1H2BJP06899 126 aa11.28□□□□□ -0.6
VRK3-207ENST00000594092 HIST1H2BOP23527 126 aa11.28□□□□□ -0.6
VRK3-207ENST00000594092 HIST1H2BBP33778 126 aa11.28□□□□□ -0.6
VRK3-207ENST00000594092 HIST1H2BDP58876 126 aa11.28□□□□□ -0.6
VRK3-207ENST00000594092 RPS20P60866 119 aaKnown RBP11.28□□□□□ -0.6
VRK3-207ENST00000594092 HIST1H2BCP62807 126 aa11.28□□□□□ -0.6
VRK3-207ENST00000594092 HIST2H2BEQ16778 126 aa11.28□□□□□ -0.6
VRK3-207ENST00000594092 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.28□□□□□ -0.6
VRK3-207ENST00000594092 Q6AWC8 147 aa11.28□□□□□ -0.6
VRK3-207ENST00000594092 HIST1H2BHQ93079 126 aa11.28□□□□□ -0.6
VRK3-207ENST00000594092 PGLYRP4Q96LB8 373 aa11.28□□□□□ -0.6
VRK3-207ENST00000594092 HIST1H2BNQ99877 126 aa11.28□□□□□ -0.6
VRK3-207ENST00000594092 HIST1H2BMQ99879 126 aa11.28□□□□□ -0.6
VRK3-207ENST00000594092 TRBV7-9A0A0J9YWB2 115 aa11.28□□□□□ -0.6
VRK3-207ENST00000594092 FOXA3P55318 350 aaPredicted RBP11.28□□□□□ -0.6
VRK3-207ENST00000594092 C12orf54Q6X4T0 127 aa11.28□□□□□ -0.6
VRK3-207ENST00000594092 ZFAND2AQ8N6M9 145 aa11.28□□□□□ -0.6
VRK3-207ENST00000594092 TMSB15BA0A087X1C1 80 aa11.27□□□□□ -0.61
VRK3-207ENST00000594092 KNCNA6PVL3 124 aa11.27□□□□□ -0.61
VRK3-207ENST00000594092 ORM1P02763 201 aa11.27□□□□□ -0.61
VRK3-207ENST00000594092 FRMD6-AS1P0C7T7 363 aa11.27□□□□□ -0.61
VRK3-207ENST00000594092 RAB4BP61018 213 aa11.27□□□□□ -0.61
VRK3-207ENST00000594092 ODF3L2Q3SX64 289 aa11.27□□□□□ -0.61
VRK3-207ENST00000594092 PRR9Q5T870 116 aa11.27□□□□□ -0.61
VRK3-207ENST00000594092 MRPL18Q9H0U6 180 aaKnown RBP11.27□□□□□ -0.61
VRK3-207ENST00000594092 TRRAPQ9Y4A5 3859 aa11.27□□□□□ -0.61
VRK3-207ENST00000594092 AGRNO00468 2067 aa11.26□□□□□ -0.61
VRK3-207ENST00000594092 DUSP14O95147 198 aaKnown RBP11.26□□□□□ -0.61
VRK3-207ENST00000594092 CRISP2P16562 243 aa11.26□□□□□ -0.61
VRK3-207ENST00000594092 ZNF124Q15973 351 aa11.26□□□□□ -0.61
VRK3-207ENST00000594092 LINC01559Q495D7 138 aa11.26□□□□□ -0.61
VRK3-207ENST00000594092 SHISA2Q6UWI4 295 aa11.26□□□□□ -0.61
VRK3-207ENST00000594092 TMEM136Q6ZRR5 245 aa11.26□□□□□ -0.61
VRK3-207ENST00000594092 STAB1Q9NY15 2570 aa11.26□□□□□ -0.61
VRK3-207ENST00000594092 HLA-DQA1P01909 254 aa11.25□□□□□ -0.61
VRK3-207ENST00000594092 HLA-DRB4P13762 266 aa11.25□□□□□ -0.61
VRK3-207ENST00000594092 INSL3P51460 131 aa11.25□□□□□ -0.61
VRK3-207ENST00000594092 NDUFA6P56556 154 aa11.25□□□□□ -0.61
VRK3-207ENST00000594092 SNRPEP62304 92 aaKnown RBP11.25□□□□□ -0.61
VRK3-207ENST00000594092 BEAN1Q3B7T3 259 aa11.25□□□□□ -0.61
VRK3-207ENST00000594092 C9orf66Q5T8R8 295 aa11.25□□□□□ -0.61
VRK3-207ENST00000594092 APRG1Q8IVJ8 170 aa11.25□□□□□ -0.61
VRK3-207ENST00000594092 BORCS7Q96B45 105 aa11.25□□□□□ -0.61
VRK3-207ENST00000594092 ODF3Q96PU9 254 aa11.25□□□□□ -0.61
VRK3-207ENST00000594092 HLA-DRB4X5D2U9 266 aa11.25□□□□□ -0.61
VRK3-207ENST00000594092 A0A1B0GXF2 115 aa11.25□□□□□ -0.61
VRK3-207ENST00000594092 C5orf52A6NGY3 159 aa11.25□□□□□ -0.61
VRK3-207ENST00000594092 J3KRW8 73 aa11.25□□□□□ -0.61
VRK3-207ENST00000594092 IGKV3-20P01619 116 aa11.25□□□□□ -0.61
VRK3-207ENST00000594092 GPX1P07203 203 aa11.25□□□□□ -0.61
VRK3-207ENST00000594092 HBBP68871 147 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms