RNA–Protein interactions for RNA: ENST00000593099.5

LIG3-216, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 4,664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-216ENST00000593099 IGKV2D-40P01614 121 aaPredicted RBP7.74□□□□□ -1.17
LIG3-216ENST00000593099 FLNBO75369 2602 aaKnown RBP7.74□□□□□ -1.17
LIG3-216ENST00000593099 TRAV2A0A0B4J234 112 aa7.74□□□□□ -1.17
LIG3-216ENST00000593099 IGHV7-4-1A0A0J9YVY3 117 aa7.74□□□□□ -1.17
LIG3-216ENST00000593099 DEFB136Q30KP8 78 aa7.74□□□□□ -1.17
LIG3-216ENST00000593099 CYYR1Q96J86 154 aa7.74□□□□□ -1.17
LIG3-216ENST00000593099 RETNQ9HD89 108 aa7.74□□□□□ -1.17
LIG3-216ENST00000593099 CYTL1Q9NRR1 136 aa7.74□□□□□ -1.17
LIG3-216ENST00000593099 INSP01308 110 aa7.73□□□□□ -1.17
LIG3-216ENST00000593099 C9orf66Q5T8R8 295 aa7.73□□□□□ -1.17
LIG3-216ENST00000593099 Q6AWC8 147 aa7.73□□□□□ -1.17
LIG3-216ENST00000593099 TRAV9-2A0A087WT02 112 aa7.73□□□□□ -1.17
LIG3-216ENST00000593099 EVI2AP22794 236 aa7.73□□□□□ -1.17
LIG3-216ENST00000593099 RPP21Q9H633 154 aaKnown RBP7.73□□□□□ -1.17
LIG3-216ENST00000593099 K7EP13 123 aa7.73□□□□□ -1.17
LIG3-216ENST00000593099 AMBPP02760 352 aa7.73□□□□□ -1.17
LIG3-216ENST00000593099 PRSS2P07478 247 aa7.73□□□□□ -1.17
LIG3-216ENST00000593099 HIST3H2BBQ8N257 126 aa7.73□□□□□ -1.17
LIG3-216ENST00000593099 ZNF664Q8N3J9 261 aa7.73□□□□□ -1.17
LIG3-216ENST00000593099 TRAV1-1A0A0B4J248 108 aa7.72□□□□□ -1.17
LIG3-216ENST00000593099 TCRAP04437 139 aa7.72□□□□□ -1.17
LIG3-216ENST00000593099 MYCNOSP40205 109 aa7.72□□□□□ -1.17
LIG3-216ENST00000593099 CRIP3Q6Q6R5 217 aa7.72□□□□□ -1.17
LIG3-216ENST00000593099 RNASE8Q8TDE3 154 aaKnown RBP7.72□□□□□ -1.17
LIG3-216ENST00000593099 PSMG3-AS1Q96PY0 264 aa7.72□□□□□ -1.17
LIG3-216ENST00000593099 F5H768 121 aa7.72□□□□□ -1.17
LIG3-216ENST00000593099 OR10J3Q5JRS4 329 aa7.72□□□□□ -1.17
LIG3-216ENST00000593099 IGFL4Q6B9Z1 124 aa7.72□□□□□ -1.17
LIG3-216ENST00000593099 LYPD6BQ8NI32 183 aa7.72□□□□□ -1.17
LIG3-216ENST00000593099 NXT2Q9NPJ8 142 aaKnown RBP7.72□□□□□ -1.17
LIG3-216ENST00000593099 SMPXQ9UHP9 88 aa7.72□□□□□ -1.17
LIG3-216ENST00000593099 IGLV11-55A0A075B6I3 123 aa7.72□□□□□ -1.17
LIG3-216ENST00000593099 THAP8Q8NA92 274 aa7.72□□□□□ -1.17
LIG3-216ENST00000593099 TNFRSF18Q9Y5U5 241 aa7.72□□□□□ -1.17
LIG3-216ENST00000593099 A0A1B0GUT8 65 aa7.72□□□□□ -1.17
LIG3-216ENST00000593099 HIST1H2BKO60814 126 aa7.72□□□□□ -1.17
LIG3-216ENST00000593099 HIST1H2BJP06899 126 aa7.72□□□□□ -1.17
LIG3-216ENST00000593099 HIST1H2BOP23527 126 aa7.72□□□□□ -1.17
LIG3-216ENST00000593099 SRIP30626 198 aa7.72□□□□□ -1.17
LIG3-216ENST00000593099 HIST1H2BBP33778 126 aa7.72□□□□□ -1.17
LIG3-216ENST00000593099 HIST1H2BDP58876 126 aa7.72□□□□□ -1.17
LIG3-216ENST00000593099 HIST1H2BCP62807 126 aa7.72□□□□□ -1.17
LIG3-216ENST00000593099 RBM3P98179 157 aaKnown RBP7.72□□□□□ -1.17
LIG3-216ENST00000593099 HIST2H2BEQ16778 126 aa7.72□□□□□ -1.17
LIG3-216ENST00000593099 ANXA2RQ3ZCQ2 193 aa7.72□□□□□ -1.17
LIG3-216ENST00000593099 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.72□□□□□ -1.17
LIG3-216ENST00000593099 HIST1H2BHQ93079 126 aa7.72□□□□□ -1.17
LIG3-216ENST00000593099 C20orf173Q96LM9 149 aa7.72□□□□□ -1.17
LIG3-216ENST00000593099 HIST1H2BNQ99877 126 aa7.72□□□□□ -1.17
LIG3-216ENST00000593099 HIST1H2BMQ99879 126 aa7.72□□□□□ -1.17
LIG3-216ENST00000593099 NAA38Q9BRA0 125 aaKnown RBP7.72□□□□□ -1.17
LIG3-216ENST00000593099 IGLV2-23P01705 113 aa7.71□□□□□ -1.17
LIG3-216ENST00000593099 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.71□□□□□ -1.18
LIG3-216ENST00000593099 TRGV4A0A0C4DH28 118 aa7.71□□□□□ -1.18
LIG3-216ENST00000593099 LOC389332A0A1B0GUA5 103 aa7.71□□□□□ -1.18
LIG3-216ENST00000593099 PPP1R17O96001 155 aa7.71□□□□□ -1.18
LIG3-216ENST00000593099 FXYD7P58549 80 aa7.71□□□□□ -1.18
LIG3-216ENST00000593099 SPANXB1Q9NS25 103 aaPredicted RBP7.71□□□□□ -1.18
LIG3-216ENST00000593099 SLURP1P55000 103 aa7.7□□□□□ -1.18
LIG3-216ENST00000593099 APOC4P55056 127 aa7.7□□□□□ -1.18
LIG3-216ENST00000593099 DYNAPQ8N1N2 210 aa7.7□□□□□ -1.18
LIG3-216ENST00000593099 OR11H2Q8NH07 326 aa7.7□□□□□ -1.18
LIG3-216ENST00000593099 AJUBAQ96IF1 538 aa7.7□□□□□ -1.18
LIG3-216ENST00000593099 KIR2DL4Q99706 377 aa7.7□□□□□ -1.18
LIG3-216ENST00000593099 TRAV12-3A0A0B4J271 114 aa7.7□□□□□ -1.18
LIG3-216ENST00000593099 PRB4P10163 310 aaPredicted RBP7.7□□□□□ -1.18
LIG3-216ENST00000593099 HBBP68871 147 aa7.7□□□□□ -1.18
LIG3-216ENST00000593099 TRBV20OR9-2A0A075B6H5 130 aa7.7□□□□□ -1.18
LIG3-216ENST00000593099 ZNF491Q8N8L2 437 aa7.7□□□□□ -1.18
LIG3-216ENST00000593099 MUC21A0A0G2JKD1 596 aa7.69□□□□□ -1.18
LIG3-216ENST00000593099 MUC21A0A140T8X8 626 aa7.69□□□□□ -1.18
LIG3-216ENST00000593099 H3BRN7 92 aa7.69□□□□□ -1.18
LIG3-216ENST00000593099 K7EIM0 57 aa7.69□□□□□ -1.18
LIG3-216ENST00000593099 CRYGCP07315 174 aa7.69□□□□□ -1.18
LIG3-216ENST00000593099 TRBV9A0A0B4J1U6 114 aa7.69□□□□□ -1.18
LIG3-216ENST00000593099 A0A0U1RQV1 116 aa7.69□□□□□ -1.18
LIG3-216ENST00000593099 HIST1H4AP62805 103 aaKnown RBP7.69□□□□□ -1.18
LIG3-216ENST00000593099 C1orf195Q5TG92 126 aa7.69□□□□□ -1.18
LIG3-216ENST00000593099 OR9G4Q8NGQ1 327 aa7.69□□□□□ -1.18
LIG3-216ENST00000593099 KLK15Q9H2R5 256 aa7.69□□□□□ -1.18
LIG3-216ENST00000593099 TRAV8-6A0A0B4J262 113 aa7.69□□□□□ -1.18
LIG3-216ENST00000593099 ODF1Q14990 250 aa7.69□□□□□ -1.18
LIG3-216ENST00000593099 Q8TAT8 98 aa7.69□□□□□ -1.18
LIG3-216ENST00000593099 RCHY1Q96PM5 261 aa7.69□□□□□ -1.18
LIG3-216ENST00000593099 XCL2Q9UBD3 114 aa7.69□□□□□ -1.18
LIG3-216ENST00000593099 I3L2K1 104 aa7.69□□□□□ -1.18
LIG3-216ENST00000593099 CFHR4Q92496 578 aa7.69□□□□□ -1.18
LIG3-216ENST00000593099 IL36BQ9NZH7 164 aa7.69□□□□□ -1.18
LIG3-216ENST00000593099 TRANK1O15050 2925 aa7.68□□□□□ -1.18
LIG3-216ENST00000593099 TEX22C9J3V5 150 aa7.68□□□□□ -1.18
LIG3-216ENST00000593099 RNASE1P07998 156 aaKnown RBP7.68□□□□□ -1.18
LIG3-216ENST00000593099 MPV17L2Q567V2 206 aa7.68□□□□□ -1.18
LIG3-216ENST00000593099 OSTCQ9NRP0 149 aa7.68□□□□□ -1.18
LIG3-216ENST00000593099 IGHV4OR15-8A0A075B7B6 117 aa7.68□□□□□ -1.18
LIG3-216ENST00000593099 A0A087WW49 117 aa7.68□□□□□ -1.18
LIG3-216ENST00000593099 DPM2O94777 84 aa7.68□□□□□ -1.18
LIG3-216ENST00000593099 MKI67P46013 3256 aaKnown RBP7.68□□□□□ -1.18
LIG3-216ENST00000593099 TRBV19A0A075B6N1 114 aa7.68□□□□□ -1.18
LIG3-216ENST00000593099 VWC2LB2RUY7 222 aa7.68□□□□□ -1.18
LIG3-216ENST00000593099 CACNG7P62955 275 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms