RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-242ENST00000593093 CRYGCP07315 174 aa11.19□□□□□ -0.62
CIRBP-242ENST00000593093 Q6AWC8 147 aa11.19□□□□□ -0.62
CIRBP-242ENST00000593093 SRSF9Q13242 221 aaKnown RBP eCLIP11.18□□□□□ -0.623e-7■■□□□ 13.7
CIRBP-242ENST00000593093 TTC9CQ8N5M4 171 aa11.18□□□□□ -0.62
CIRBP-242ENST00000593093 GLMPQ8WWB7 406 aa11.18□□□□□ -0.62
CIRBP-242ENST00000593093 FAM215AQ9Y5M1 114 aa11.18□□□□□ -0.62
CIRBP-242ENST00000593093 C16orf97H3BN30 126 aa11.18□□□□□ -0.62
CIRBP-242ENST00000593093 GAGE13Q4V321 117 aa11.18□□□□□ -0.62
CIRBP-242ENST00000593093 ZNF502Q8TBZ5 544 aa11.18□□□□□ -0.62
CIRBP-242ENST00000593093 K7EM74 188 aa11.18□□□□□ -0.62
CIRBP-242ENST00000593093 EMP1P54849 157 aa11.18□□□□□ -0.62
CIRBP-242ENST00000593093 SPANXN1Q5VSR9 72 aa11.18□□□□□ -0.62
CIRBP-242ENST00000593093 RPL32P62910 135 aaKnown RBP11.17□□□□□ -0.62
CIRBP-242ENST00000593093 C1QTNF4Q9BXJ3 329 aa11.17□□□□□ -0.62
CIRBP-242ENST00000593093 MAPKAPK5-AS1Q8N8E1 139 aa11.17□□□□□ -0.62
CIRBP-242ENST00000593093 PRR25Q96S07 402 aa11.17□□□□□ -0.62
CIRBP-242ENST00000593093 TEX22C9J3V5 150 aa11.17□□□□□ -0.62
CIRBP-242ENST00000593093 KLRD1Q13241 179 aa11.17□□□□□ -0.62
CIRBP-242ENST00000593093 I3L2K1 104 aa11.16□□□□□ -0.62
CIRBP-242ENST00000593093 TEX36Q5VZQ5 186 aa11.16□□□□□ -0.62
CIRBP-242ENST00000593093 GFRALQ6UXV0 394 aa11.16□□□□□ -0.62
CIRBP-242ENST00000593093 VKORC1Q9BQB6 163 aa11.16□□□□□ -0.62
CIRBP-242ENST00000593093 PSMB2P49721 201 aa11.16□□□□□ -0.62
CIRBP-242ENST00000593093 TMEM30BQ3MIR4 351 aa11.16□□□□□ -0.62
CIRBP-242ENST00000593093 PRSS29PA6NIE9 313 aa11.15□□□□□ -0.62
CIRBP-242ENST00000593093 H7C2G1 150 aa11.15□□□□□ -0.62
CIRBP-242ENST00000593093 K7EIM0 57 aa11.15□□□□□ -0.62
CIRBP-242ENST00000593093 FOXC1Q12948 553 aa11.15□□□□□ -0.62
CIRBP-242ENST00000593093 ZNF562Q6V9R5 426 aa11.15□□□□□ -0.62
CIRBP-242ENST00000593093 CEND1Q8N111 149 aa11.15□□□□□ -0.62
CIRBP-242ENST00000593093 SPATA25Q9BR10 227 aa11.15□□□□□ -0.62
CIRBP-242ENST00000593093 LRBAP50851 2863 aa11.15□□□□□ -0.62
CIRBP-242ENST00000593093 IGLL5B9A064 214 aa11.15□□□□□ -0.62
CIRBP-242ENST00000593093 H3BRN7 92 aa11.15□□□□□ -0.62
CIRBP-242ENST00000593093 RAI1Q7Z5J4 1906 aaPredicted RBP11.15□□□□□ -0.62
CIRBP-242ENST00000593093 OR11H12B2RN74 326 aa11.15□□□□□ -0.62
CIRBP-242ENST00000593093 TSPAN13O95857 204 aa11.15□□□□□ -0.62
CIRBP-242ENST00000593093 MFAP4P55083 255 aa11.15□□□□□ -0.62
CIRBP-242ENST00000593093 ATP5J2P56134 94 aa11.15□□□□□ -0.62
CIRBP-242ENST00000593093 OR11H1Q8NG94 326 aa11.15□□□□□ -0.62
CIRBP-242ENST00000593093 OR11H2Q8NH07 326 aa11.15□□□□□ -0.62
CIRBP-242ENST00000593093 MBD3L4A6NDZ8 208 aaPredicted RBP11.14□□□□□ -0.63
CIRBP-242ENST00000593093 MBD3L3A6NE82 208 aaPredicted RBP11.14□□□□□ -0.63
CIRBP-242ENST00000593093 MBD3L5A6NJ08 208 aaPredicted RBP11.14□□□□□ -0.63
CIRBP-242ENST00000593093 BUB1B-PAK6H3BSN5 160 aa11.14□□□□□ -0.63
CIRBP-242ENST00000593093 M0R381 172 aa11.14□□□□□ -0.63
CIRBP-242ENST00000593093 C12orf74Q32Q52 190 aa11.14□□□□□ -0.63
CIRBP-242ENST00000593093 TMEM155Q4W5P6 130 aa11.14□□□□□ -0.63
CIRBP-242ENST00000593093 MBD3L2Q8NHZ7 208 aaPredicted RBP11.14□□□□□ -0.63
CIRBP-242ENST00000593093 TMEM14CQ9P0S9 112 aa11.14□□□□□ -0.63
CIRBP-242ENST00000593093 TRGV3P03979 118 aa11.14□□□□□ -0.63
CIRBP-242ENST00000593093 ECSCRQ19T08 205 aa11.14□□□□□ -0.63
CIRBP-242ENST00000593093 PRAC2D3DTV9 90 aa11.14□□□□□ -0.63
CIRBP-242ENST00000593093 BRI3O95415 125 aa11.14□□□□□ -0.63
CIRBP-242ENST00000593093 SCGB1C2P0DMR2 95 aa11.14□□□□□ -0.63
CIRBP-242ENST00000593093 MRGPRG-AS1Q2M3A8 158 aa11.14□□□□□ -0.63
CIRBP-242ENST00000593093 DTX2Q86UW9 622 aa11.14□□□□□ -0.63
CIRBP-242ENST00000593093 TEX29Q8N6K0 151 aa11.14□□□□□ -0.63
CIRBP-242ENST00000593093 C21orf62Q9NYP8 219 aa11.14□□□□□ -0.63
CIRBP-242ENST00000593093 FABP5P3A8MUU1 101 aa11.13□□□□□ -0.63
CIRBP-242ENST00000593093 MGPP08493 103 aa11.13□□□□□ -0.63
CIRBP-242ENST00000593093 PF4V1P10720 104 aa11.13□□□□□ -0.63
CIRBP-242ENST00000593093 IL17RELQ6ZVW7 336 aa11.13□□□□□ -0.63
CIRBP-242ENST00000593093 RNASE6Q93091 150 aaKnown RBP11.13□□□□□ -0.63
CIRBP-242ENST00000593093 PTH2Q96A98 100 aa11.13□□□□□ -0.63
CIRBP-242ENST00000593093 WI2-2373I1.2A0A1W2PRP0 233 aa11.13□□□□□ -0.63
CIRBP-242ENST00000593093 RPL7P18124 248 aaKnown RBP11.13□□□□□ -0.63
CIRBP-242ENST00000593093 RPL11P62913 178 aaKnown RBP11.13□□□□□ -0.63
CIRBP-242ENST00000593093 SORL1Q92673 2214 aa11.13□□□□□ -0.63
CIRBP-242ENST00000593093 S100A4P26447 101 aaKnown RBP11.13□□□□□ -0.63
CIRBP-242ENST00000593093 C3orf36Q3SXR2 165 aa11.13□□□□□ -0.63
CIRBP-242ENST00000593093 PIP4P1Q86T03 277 aa11.13□□□□□ -0.63
CIRBP-242ENST00000593093 LINC00574Q9H8X3 128 aa11.13□□□□□ -0.63
CIRBP-242ENST00000593093 ERG28Q9UKR5 140 aa11.13□□□□□ -0.63
CIRBP-242ENST00000593093 INS-IGF2F8WCM5 200 aa11.12□□□□□ -0.63
CIRBP-242ENST00000593093 PRRG2O14669 202 aa11.12□□□□□ -0.63
CIRBP-242ENST00000593093 YAE1D1Q9NRH1 226 aa11.12□□□□□ -0.63
CIRBP-242ENST00000593093 ASH1LQ9NR48 2969 aaKnown RBP11.12□□□□□ -0.63
CIRBP-242ENST00000593093 F8W1H4 67 aa11.12□□□□□ -0.63
CIRBP-242ENST00000593093 XGP55808 180 aa11.12□□□□□ -0.63
CIRBP-242ENST00000593093 FOXI2Q6ZQN5 318 aa11.12□□□□□ -0.63
CIRBP-242ENST00000593093 Q6ZQT7 251 aa11.12□□□□□ -0.63
CIRBP-242ENST00000593093 PVRIGQ6DKI7 326 aa11.12□□□□□ -0.63
CIRBP-242ENST00000593093 DYNAPQ8N1N2 210 aa11.12□□□□□ -0.63
CIRBP-242ENST00000593093 NXT2Q9NPJ8 142 aaKnown RBP11.12□□□□□ -0.63
CIRBP-242ENST00000593093 SVEP1Q4LDE5 3571 aa11.11□□□□□ -0.63
CIRBP-242ENST00000593093 TCF15Q12870 199 aa11.11□□□□□ -0.63
CIRBP-242ENST00000593093 ZFAND6Q6FIF0 208 aa11.11□□□□□ -0.63
CIRBP-242ENST00000593093 ZNF493Q6ZR52 646 aa11.11□□□□□ -0.63
CIRBP-242ENST00000593093 HHLA3Q9XRX5 114 aa11.11□□□□□ -0.63
CIRBP-242ENST00000593093 SCGB3A1Q96QR1 104 aa11.1□□□□□ -0.63
CIRBP-242ENST00000593093 ASCL5Q7RTU5 278 aa11.1□□□□□ -0.63
CIRBP-242ENST00000593093 CFHR4Q92496 578 aa11.1□□□□□ -0.63
CIRBP-242ENST00000593093 DPF1Q92782 380 aa11.1□□□□□ -0.63
CIRBP-242ENST00000593093 LINC01549A6NIU2 74 aa11.09□□□□□ -0.63
CIRBP-242ENST00000593093 NBR2O15453 112 aa11.09□□□□□ -0.63
CIRBP-242ENST00000593093 HOXA3O43365 443 aaPredicted RBP11.09□□□□□ -0.63
CIRBP-242ENST00000593093 HLA-DRB4P13762 266 aa11.09□□□□□ -0.63
CIRBP-242ENST00000593093 RAXQ9Y2V3 346 aa11.09□□□□□ -0.63
CIRBP-242ENST00000593093 HLA-DRB4X5D2U9 266 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms