RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 PRNTQ86SH4 94 aa10.74□□□□□ -0.69
DDX39A-221ENST00000593026 C11orf45Q8TAV5 145 aa10.74□□□□□ -0.69
DDX39A-221ENST00000593026 LINC00479Q96M42 142 aa10.74□□□□□ -0.69
DDX39A-221ENST00000593026 TRAV34A0A0B4J273 112 aa10.73□□□□□ -0.69
DDX39A-221ENST00000593026 C11orf94C9JXX5 98 aa10.73□□□□□ -0.69
DDX39A-221ENST00000593026 ZNF324O75467 553 aaPredicted RBP10.73□□□□□ -0.69
DDX39A-221ENST00000593026 IFNA1P01562 189 aa10.73□□□□□ -0.69
DDX39A-221ENST00000593026 PRM2P04554 102 aa10.73□□□□□ -0.69
DDX39A-221ENST00000593026 TVP23CQ96ET8 276 aa10.73□□□□□ -0.69
DDX39A-221ENST00000593026 PYGO2Q9BRQ0 406 aa10.73□□□□□ -0.69
DDX39A-221ENST00000593026 AZU1P20160 251 aa10.72□□□□□ -0.69
DDX39A-221ENST00000593026 C16orf74Q96GX8 76 aa10.72□□□□□ -0.69
DDX39A-221ENST00000593026 CXorf65A6NEN9 183 aa10.71□□□□□ -0.69
DDX39A-221ENST00000593026 C3orf84H3BNL1 204 aa10.71□□□□□ -0.69
DDX39A-221ENST00000593026 RGS13O14921 159 aa10.71□□□□□ -0.69
DDX39A-221ENST00000593026 AKR1C3P42330 323 aa10.71□□□□□ -0.69
DDX39A-221ENST00000593026 NANOS2P60321 138 aaKnown RBP10.71□□□□□ -0.69
DDX39A-221ENST00000593026 UBE2G1P62253 170 aa10.71□□□□□ -0.69
DDX39A-221ENST00000593026 PMS2P11Q13670 270 aa10.71□□□□□ -0.69
DDX39A-221ENST00000593026 SAPCD1Q5SSQ6 148 aa10.71□□□□□ -0.69
DDX39A-221ENST00000593026 Q6AWC8 147 aa10.71□□□□□ -0.69
DDX39A-221ENST00000593026 Q6ZQT7 251 aa10.71□□□□□ -0.69
DDX39A-221ENST00000593026 ZNF493Q6ZR52 646 aa10.71□□□□□ -0.69
DDX39A-221ENST00000593026 Q86TA4 180 aa10.71□□□□□ -0.69
DDX39A-221ENST00000593026 TMEM263Q8WUH6 116 aaKnown RBP10.71□□□□□ -0.69
DDX39A-221ENST00000593026 FMC1Q96HJ9 113 aa10.71□□□□□ -0.69
DDX39A-221ENST00000593026 CELA1Q9UNI1 258 aa10.71□□□□□ -0.69
DDX39A-221ENST00000593026 TEX48A0A1B0GUV7 120 aa10.7□□□□□ -0.7
DDX39A-221ENST00000593026 SCO2A0A1W2PP80 73 aa10.7□□□□□ -0.7
DDX39A-221ENST00000593026 SPART-AS1P0CW21 52 aa10.7□□□□□ -0.7
DDX39A-221ENST00000593026 BCL2P10415 239 aa10.7□□□□□ -0.7
DDX39A-221ENST00000593026 FAM222AQ5U5X8 452 aa10.7□□□□□ -0.7
DDX39A-221ENST00000593026 ZFAND6Q6FIF0 208 aa10.7□□□□□ -0.7
DDX39A-221ENST00000593026 TEX261Q6UWH6 196 aa10.7□□□□□ -0.7
DDX39A-221ENST00000593026 RNASE8Q8TDE3 154 aaKnown RBP10.7□□□□□ -0.7
DDX39A-221ENST00000593026 C8orf49Q96NF6 230 aa10.7□□□□□ -0.7
DDX39A-221ENST00000593026 TXNDC17Q9BRA2 123 aa10.7□□□□□ -0.7
DDX39A-221ENST00000593026 LINC00467Q9BRT7 94 aa10.7□□□□□ -0.7
DDX39A-221ENST00000593026 DKK2Q9UBU2 259 aa10.7□□□□□ -0.7
DDX39A-221ENST00000593026 KLF12Q9Y4X4 402 aa10.7□□□□□ -0.7
DDX39A-221ENST00000593026 IGHV1OR15-1A0A075B7D0 117 aa10.69□□□□□ -0.7
DDX39A-221ENST00000593026 TRAV21A0A0B4J279 112 aa10.69□□□□□ -0.7
DDX39A-221ENST00000593026 PLAC8L1A1L4L8 177 aa10.69□□□□□ -0.7
DDX39A-221ENST00000593026 CBY3A6NI87 242 aa10.69□□□□□ -0.7
DDX39A-221ENST00000593026 MEF2BQ02080 365 aaPredicted RBP10.69□□□□□ -0.7
DDX39A-221ENST00000593026 TMEM183BQ1AE95 376 aa10.69□□□□□ -0.7
DDX39A-221ENST00000593026 SMUG1Q53HV7 270 aa10.69□□□□□ -0.7
DDX39A-221ENST00000593026 EIF4E3Q8N5X7 224 aaKnown RBP10.69□□□□□ -0.7
DDX39A-221ENST00000593026 C2CD4CQ8TF44 421 aa10.69□□□□□ -0.7
DDX39A-221ENST00000593026 VAX2Q9UIW0 290 aa10.69□□□□□ -0.7
DDX39A-221ENST00000593026 TRBV6-1A0A0K0K1D8 114 aa10.68□□□□□ -0.7
DDX39A-221ENST00000593026 GCGP01275 180 aa10.68□□□□□ -0.7
DDX39A-221ENST00000593026 S100A9P06702 114 aaKnown RBP10.68□□□□□ -0.7
DDX39A-221ENST00000593026 TAGLN2P37802 199 aaKnown RBP10.68□□□□□ -0.7
DDX39A-221ENST00000593026 ANXA2RQ3ZCQ2 193 aa10.68□□□□□ -0.7
DDX39A-221ENST00000593026 MUC21Q5SSG8 566 aa10.68□□□□□ -0.7
DDX39A-221ENST00000593026 ZNF680Q8NEM1 530 aa10.68□□□□□ -0.7
DDX39A-221ENST00000593026 LYPD6BQ8NI32 183 aa10.68□□□□□ -0.7
DDX39A-221ENST00000593026 ZFP30Q9Y2G7 519 aa10.68□□□□□ -0.7
DDX39A-221ENST00000593026 TIMM8BQ9Y5J9 83 aaPredicted RBP10.68□□□□□ -0.7
DDX39A-221ENST00000593026 LYRM9A8MSI8 78 aa10.67□□□□□ -0.7
DDX39A-221ENST00000593026 SNURFLB1AK76 121 aa10.67□□□□□ -0.7
DDX39A-221ENST00000593026 PDE6DO43924 150 aa10.67□□□□□ -0.7
DDX39A-221ENST00000593026 CASC10Q5T4H9 136 aa10.67□□□□□ -0.7
DDX39A-221ENST00000593026 FAM159AQ6UWV7 190 aa10.67□□□□□ -0.7
DDX39A-221ENST00000593026 ZNF767PQ75MW2 155 aa10.67□□□□□ -0.7
DDX39A-221ENST00000593026 C11orf52Q96A22 123 aa10.67□□□□□ -0.7
DDX39A-221ENST00000593026 NAGKQ9UJ70 344 aa10.67□□□□□ -0.7
DDX39A-221ENST00000593026 LTAP01374 205 aa10.66□□□□□ -0.7
DDX39A-221ENST00000593026 PFN1P07737 140 aaKnown RBP10.66□□□□□ -0.7
DDX39A-221ENST00000593026 ZNF80P51504 273 aaPredicted RBP10.66□□□□□ -0.7
DDX39A-221ENST00000593026 C12orf74Q32Q52 190 aa10.66□□□□□ -0.7
DDX39A-221ENST00000593026 Q6ZTC4 211 aa10.66□□□□□ -0.7
DDX39A-221ENST00000593026 PHLDA1Q8WV24 401 aaPredicted RBP10.66□□□□□ -0.7
DDX39A-221ENST00000593026 NOP10Q9NPE3 64 aaKnown RBP10.66□□□□□ -0.7
DDX39A-221ENST00000593026 TP53TG3Q9ULZ0 132 aa10.66□□□□□ -0.7
DDX39A-221ENST00000593026 DNAH7Q8WXX0 4024 aa10.66□□□□□ -0.7
DDX39A-221ENST00000593026 NUPR2A6NF83 97 aa10.65□□□□□ -0.7
DDX39A-221ENST00000593026 DAD1P61803 113 aa10.65□□□□□ -0.7
DDX39A-221ENST00000593026 IBA57Q5T440 356 aaKnown RBP10.65□□□□□ -0.7
DDX39A-221ENST00000593026 C11orf72Q8NBR9 251 aa10.65□□□□□ -0.7
DDX39A-221ENST00000593026 GSN-AS1Q9NRJ2 163 aa10.65□□□□□ -0.7
DDX39A-221ENST00000593026 TRGV11A0A075B6L2 103 aa10.64□□□□□ -0.71
DDX39A-221ENST00000593026 RBFOX3A6NFN3 312 aa10.64□□□□□ -0.71
DDX39A-221ENST00000593026 RPL35P42766 123 aaKnown RBP10.64□□□□□ -0.71
DDX39A-221ENST00000593026 ZNF415Q09FC8 603 aa10.64□□□□□ -0.71
DDX39A-221ENST00000593026 TDRG1Q3Y452 100 aa10.64□□□□□ -0.71
DDX39A-221ENST00000593026 CEMP1Q6PRD7 247 aaPredicted RBP10.64□□□□□ -0.71
DDX39A-221ENST00000593026 COX8CQ7Z4L0 72 aa10.64□□□□□ -0.71
DDX39A-221ENST00000593026 TMEM183AQ8IXX5 376 aa10.64□□□□□ -0.71
DDX39A-221ENST00000593026 ZC2HC1AQ96GY0 325 aa10.64□□□□□ -0.71
DDX39A-221ENST00000593026 KCNS1Q96KK3 526 aa10.64□□□□□ -0.71
DDX39A-221ENST00000593026 DERL1Q9BUN8 251 aa10.64□□□□□ -0.71
DDX39A-221ENST00000593026 SDF2L1Q9HCN8 221 aa10.64□□□□□ -0.71
DDX39A-221ENST00000593026 TRAV10A0A0B4J240 114 aa10.63□□□□□ -0.71
DDX39A-221ENST00000593026 FABP5P3A8MUU1 101 aa10.63□□□□□ -0.71
DDX39A-221ENST00000593026 DEFB130BP0DP73 79 aa10.63□□□□□ -0.71
DDX39A-221ENST00000593026 DEFB130AP0DP74 79 aa10.63□□□□□ -0.71
DDX39A-221ENST00000593026 TCL1AP56279 114 aa10.63□□□□□ -0.71
DDX39A-221ENST00000593026 DAZ2Q13117 558 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms