RNA–Protein interactions for RNA: ENST00000592546.5

RFX2-222, Transcript of regulatory factor X2, human

APPRIS ALT1 TSL 2 BASIC

Gene RFX2, Length 2,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-222	ENST00000592546	MRPL35	Q9NZE8	188 aa	Known RBP	11.23	□□□□□ -0.61
RFX2-222	ENST00000592546	CSMD1	Q96PZ7	3565 aa		11.23	□□□□□ -0.61
RFX2-222	ENST00000592546	NBAS	A2RRP1	2371 aa		11.23	□□□□□ -0.61
RFX2-222	ENST00000592546	TRAV26-1	A0A087WT03	109 aa		11.23	□□□□□ -0.61
RFX2-222	ENST00000592546	IGLV2-18	A0A075B6J9	118 aa		11.22	□□□□□ -0.61
RFX2-222	ENST00000592546	IGHV1-3	A0A0C4DH29	117 aa		11.22	□□□□□ -0.61
RFX2-222	ENST00000592546		A0A1B0GWB2	263 aa		11.22	□□□□□ -0.61
RFX2-222	ENST00000592546	GATA1	P15976	413 aa	Predicted RBP	11.22	□□□□□ -0.61
RFX2-222	ENST00000592546	GRN	P28799	593 aa	Known RBP	11.22	□□□□□ -0.61
RFX2-222	ENST00000592546		Q8TAT8	98 aa		11.22	□□□□□ -0.61
RFX2-222	ENST00000592546	HIST1H4G	Q99525	98 aa		11.22	□□□□□ -0.61
RFX2-222	ENST00000592546	TRBV7-3	A0A075B6L6	115 aa		11.22	□□□□□ -0.61
RFX2-222	ENST00000592546		Q8N8P6	123 aa		11.22	□□□□□ -0.61
RFX2-222	ENST00000592546	C20orf78	Q9BR46	151 aa		11.22	□□□□□ -0.61
RFX2-222	ENST00000592546	PRSS47	A8MTI9	375 aa		11.21	□□□□□ -0.61
RFX2-222	ENST00000592546	SRSF2	Q01130	221 aa	Known RBP	11.21	□□□□□ -0.61
RFX2-222	ENST00000592546	RALY	Q9UKM9	306 aa	Known RBP	11.21	□□□□□ -0.61
RFX2-222	ENST00000592546	NCOR2	Q9Y618	2525 aa		11.21	□□□□□ -0.62
RFX2-222	ENST00000592546	IGLV1-47	P01700	117 aa		11.21	□□□□□ -0.62
RFX2-222	ENST00000592546	CD3E	P07766	207 aa		11.21	□□□□□ -0.62
RFX2-222	ENST00000592546	CRYBA4	P53673	196 aa		11.21	□□□□□ -0.62
RFX2-222	ENST00000592546	SRSF8	Q9BRL6	282 aa	Known RBP	11.21	□□□□□ -0.62
RFX2-222	ENST00000592546	APOM	O95445	188 aa		11.2	□□□□□ -0.62
RFX2-222	ENST00000592546	MRPL16	Q9NX20	251 aa	Known RBP	11.2	□□□□□ -0.62
RFX2-222	ENST00000592546		B9A039	149 aa		11.2	□□□□□ -0.62
RFX2-222	ENST00000592546	ORM1	P02763	201 aa		11.2	□□□□□ -0.62
RFX2-222	ENST00000592546	COX7A1	P24310	79 aa		11.2	□□□□□ -0.62
RFX2-222	ENST00000592546	GEMIN7	Q9H840	131 aa	Known RBP	11.2	□□□□□ -0.62
RFX2-222	ENST00000592546	ARHGAP32	A7KAX9	2087 aa		11.19	□□□□□ -0.62
RFX2-222	ENST00000592546	CHD8	Q9HCK8	2581 aa		11.19	□□□□□ -0.62
RFX2-222	ENST00000592546	PIEZO1	Q92508	2521 aa		11.19	□□□□□ -0.62
RFX2-222	ENST00000592546	FOXI1	Q12951	378 aa		11.19	□□□□□ -0.62
RFX2-222	ENST00000592546	DTX2	Q86UW9	622 aa		11.19	□□□□□ -0.62
RFX2-222	ENST00000592546	VKORC1	Q9BQB6	163 aa		11.19	□□□□□ -0.62
RFX2-222	ENST00000592546		A0A087WX48	190 aa		11.19	□□□□□ -0.62
RFX2-222	ENST00000592546	FAM90A27P	A6NNH2	459 aa		11.19	□□□□□ -0.62
RFX2-222	ENST00000592546	LINC01619	G3V211	115 aa		11.19	□□□□□ -0.62
RFX2-222	ENST00000592546	BUB1B-PAK6	H3BSN5	160 aa		11.19	□□□□□ -0.62
RFX2-222	ENST00000592546	LY6H	O94772	140 aa		11.19	□□□□□ -0.62
RFX2-222	ENST00000592546	MYOZ3	Q8TDC0	251 aa		11.19	□□□□□ -0.62
RFX2-222	ENST00000592546	CDIP1	Q9H305	208 aa		11.19	□□□□□ -0.62
RFX2-222	ENST00000592546	KLRB1	Q12918	225 aa		11.18	□□□□□ -0.62
RFX2-222	ENST00000592546	MORN3	Q6PF18	240 aa	Predicted RBP	11.18	□□□□□ -0.62
RFX2-222	ENST00000592546	C8orf86	Q6ZUL3	223 aa		11.18	□□□□□ -0.62
RFX2-222	ENST00000592546	IGFBPL1	Q8WX77	278 aa		11.18	□□□□□ -0.62
RFX2-222	ENST00000592546	C1QTNF4	Q9BXJ3	329 aa		11.18	□□□□□ -0.62
RFX2-222	ENST00000592546	RAB1B	Q9H0U4	201 aa		11.18	□□□□□ -0.62
RFX2-222	ENST00000592546		S4R3C0	116 aa		11.18	□□□□□ -0.62
RFX2-222	ENST00000592546	ANKHD1	Q8IWZ3	2542 aa	Known RBP	11.18	□□□□□ -0.62
RFX2-222	ENST00000592546	NCBP2L	A6PVI3	153 aa	Known RBP	11.18	□□□□□ -0.62
RFX2-222	ENST00000592546	CNIH1	O95406	144 aa		11.18	□□□□□ -0.62
RFX2-222	ENST00000592546	IGHG4	P01861	327 aa		11.18	□□□□□ -0.62
RFX2-222	ENST00000592546	PPIF	P30405	207 aa	Known RBP	11.18	□□□□□ -0.62
RFX2-222	ENST00000592546	SYT8	Q8NBV8	401 aa		11.18	□□□□□ -0.62
RFX2-222	ENST00000592546	ATP6V0E2	Q8NHE4	81 aa		11.18	□□□□□ -0.62
RFX2-222	ENST00000592546	ZNF418	Q8TF45	676 aa	Predicted RBP	11.17	□□□□□ -0.62
RFX2-222	ENST00000592546	RPE	Q96AT9	228 aa		11.17	□□□□□ -0.62
RFX2-222	ENST00000592546	FABP5P3	A8MUU1	101 aa		11.17	□□□□□ -0.62
RFX2-222	ENST00000592546	PLN	P26678	52 aa		11.17	□□□□□ -0.62
RFX2-222	ENST00000592546	SMCP	P49901	116 aa	Predicted RBP	11.17	□□□□□ -0.62
RFX2-222	ENST00000592546	KLRD1	Q13241	179 aa		11.17	□□□□□ -0.62
RFX2-222	ENST00000592546	CDSN	Q15517	529 aa		11.17	□□□□□ -0.62
RFX2-222	ENST00000592546	CFAP126	Q5VTH2	177 aa		11.17	□□□□□ -0.62
RFX2-222	ENST00000592546	SVEP1	Q4LDE5	3571 aa		11.16	□□□□□ -0.62
RFX2-222	ENST00000592546	NDUFA3	O95167	84 aa		11.16	□□□□□ -0.62
RFX2-222	ENST00000592546	RPL7	P18124	248 aa	Known RBP	11.16	□□□□□ -0.62
RFX2-222	ENST00000592546	LAGE3	Q14657	143 aa		11.16	□□□□□ -0.62
RFX2-222	ENST00000592546	HLA-DMB	P28068	263 aa		11.16	□□□□□ -0.62
RFX2-222	ENST00000592546	IGFL4	Q6B9Z1	124 aa		11.16	□□□□□ -0.62
RFX2-222	ENST00000592546	CYSLTR1	Q9Y271	337 aa		11.16	□□□□□ -0.62
RFX2-222	ENST00000592546	ATRX	P46100	2492 aa		11.15	□□□□□ -0.62
RFX2-222	ENST00000592546	NRAC	Q8N912	160 aa		11.15	□□□□□ -0.62
RFX2-222	ENST00000592546	RNF5	Q99942	180 aa		11.15	□□□□□ -0.62
RFX2-222	ENST00000592546	MYMX	A0A1B0GTQ4	84 aa		11.15	□□□□□ -0.63
RFX2-222	ENST00000592546	HOXA3	O43365	443 aa	Predicted RBP	11.15	□□□□□ -0.63
RFX2-222	ENST00000592546	SPINK8	P0C7L1	97 aa		11.15	□□□□□ -0.63
RFX2-222	ENST00000592546	ZNF672	Q499Z4	452 aa	Predicted RBP	11.15	□□□□□ -0.63
RFX2-222	ENST00000592546	LCNL1	Q6ZST4	164 aa		11.15	□□□□□ -0.63
RFX2-222	ENST00000592546	NFE4	Q86UQ8	179 aa		11.15	□□□□□ -0.63
RFX2-222	ENST00000592546		F8W735	103 aa	Predicted RBP	11.14	□□□□□ -0.63
RFX2-222	ENST00000592546	EFNA4	P52798	201 aa		11.14	□□□□□ -0.63
RFX2-222	ENST00000592546	FHL3	Q13643	280 aa		11.14	□□□□□ -0.63
RFX2-222	ENST00000592546	PGPEP1	Q9NXJ5	209 aa		11.14	□□□□□ -0.63
RFX2-222	ENST00000592546	SMAD5-AS1	Q9Y6J3	95 aa		11.14	□□□□□ -0.63
RFX2-222	ENST00000592546	OR11H12	B2RN74	326 aa		11.14	□□□□□ -0.63
RFX2-222	ENST00000592546		F8VRH5	84 aa		11.14	□□□□□ -0.63
RFX2-222	ENST00000592546	TRGV3	P03979	118 aa		11.14	□□□□□ -0.63
RFX2-222	ENST00000592546	MFAP4	P55083	255 aa		11.14	□□□□□ -0.63
RFX2-222	ENST00000592546	OR11H1	Q8NG94	326 aa		11.14	□□□□□ -0.63
RFX2-222	ENST00000592546	OR11H2	Q8NH07	326 aa		11.14	□□□□□ -0.63
RFX2-222	ENST00000592546	DLX4	Q92988	240 aa	Predicted RBP	11.14	□□□□□ -0.63
RFX2-222	ENST00000592546	ZNF48	Q96MX3	618 aa	Predicted RBP	11.14	□□□□□ -0.63
RFX2-222	ENST00000592546	ONECUT1	Q9UBC0	465 aa		11.14	□□□□□ -0.63
RFX2-222	ENST00000592546	MT-ATP8	P03928	68 aa		11.13	□□□□□ -0.63
RFX2-222	ENST00000592546	IL17REL	Q6ZVW7	336 aa		11.13	□□□□□ -0.63
RFX2-222	ENST00000592546	FANCD2OS	Q96PS1	177 aa		11.13	□□□□□ -0.63
RFX2-222	ENST00000592546	ASH1L	Q9NR48	2969 aa	Known RBP	11.13	□□□□□ -0.63
RFX2-222	ENST00000592546	TRAV12-1	A0A0B4J245	112 aa		11.13	□□□□□ -0.63
RFX2-222	ENST00000592546	LY6L	H3BQJ8	138 aa		11.13	□□□□□ -0.63
RFX2-222	ENST00000592546		H7C1H1	209 aa		11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms