RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 LAMA3Q16787 3333 aa4.87□□□□□ -1.63
SMAD4-212ENST00000591126 A4D1N5 150 aa4.87□□□□□ -1.63
SMAD4-212ENST00000591126 I3L2K1 104 aa4.87□□□□□ -1.63
SMAD4-212ENST00000591126 SH2D1AO60880 128 aa4.87□□□□□ -1.63
SMAD4-212ENST00000591126 DEFB136Q30KP8 78 aa4.87□□□□□ -1.63
SMAD4-212ENST00000591126 PRR25Q96S07 402 aa4.87□□□□□ -1.63
SMAD4-212ENST00000591126 USF3Q68DE3 2245 aa4.87□□□□□ -1.63
SMAD4-212ENST00000591126 IGHV3-53P01767 116 aa4.87□□□□□ -1.63
SMAD4-212ENST00000591126 S100A7L2Q5SY68 101 aa4.87□□□□□ -1.63
SMAD4-212ENST00000591126 TMEM170BQ5T4T1 132 aa4.87□□□□□ -1.63
SMAD4-212ENST00000591126 ADAMTSL5Q6ZMM2 481 aa4.87□□□□□ -1.63
SMAD4-212ENST00000591126 CRIP2P52943 208 aaPredicted RBP4.86□□□□□ -1.63
SMAD4-212ENST00000591126 IGKV2D-24A0A075B6R9 120 aa4.86□□□□□ -1.63
SMAD4-212ENST00000591126 DEFB131BA0A096LNP1 70 aa4.86□□□□□ -1.63
SMAD4-212ENST00000591126 LY6LH3BQJ8 138 aa4.86□□□□□ -1.63
SMAD4-212ENST00000591126 K7EP13 123 aa4.86□□□□□ -1.63
SMAD4-212ENST00000591126 PHOX2AO14813 284 aa4.86□□□□□ -1.63
SMAD4-212ENST00000591126 LAGE3Q14657 143 aa4.86□□□□□ -1.63
SMAD4-212ENST00000591126 HSPB9Q9BQS6 159 aa4.86□□□□□ -1.63
SMAD4-212ENST00000591126 GAGE12JA6NER3 117 aa4.86□□□□□ -1.63
SMAD4-212ENST00000591126 GAGE1Q13065 139 aa4.86□□□□□ -1.63
SMAD4-212ENST00000591126 GAGE4Q13068 117 aa4.86□□□□□ -1.63
SMAD4-212ENST00000591126 GAGE5Q13069 117 aa4.86□□□□□ -1.63
SMAD4-212ENST00000591126 GAGE13Q4V321 117 aa4.86□□□□□ -1.63
SMAD4-212ENST00000591126 SLC25A34Q6PIV7 304 aa4.86□□□□□ -1.63
SMAD4-212ENST00000591126 Q86TA4 180 aa4.86□□□□□ -1.63
SMAD4-212ENST00000591126 NOP10Q9NPE3 64 aaKnown RBP4.86□□□□□ -1.63
SMAD4-212ENST00000591126 KMT2EQ8IZD2 1858 aa4.86□□□□□ -1.63
SMAD4-212ENST00000591126 CXCL3P19876 107 aa4.86□□□□□ -1.63
SMAD4-212ENST00000591126 HNRNPA3P51991 378 aaKnown RBP4.86□□□□□ -1.63
SMAD4-212ENST00000591126 DEFB135Q30KP9 77 aa4.86□□□□□ -1.63
SMAD4-212ENST00000591126 SLC25A2Q9BXI2 301 aa4.86□□□□□ -1.63
SMAD4-212ENST00000591126 ARID1AO14497 2285 aa4.85□□□□□ -1.63
SMAD4-212ENST00000591126 CTSGP08311 255 aa4.85□□□□□ -1.63
SMAD4-212ENST00000591126 PLNP26678 52 aa4.85□□□□□ -1.63
SMAD4-212ENST00000591126 PSMB8P28062 276 aa4.85□□□□□ -1.63
SMAD4-212ENST00000591126 JPT2Q9H910 190 aa4.85□□□□□ -1.63
SMAD4-212ENST00000591126 POLEQ07864 2286 aa4.85□□□□□ -1.63
SMAD4-212ENST00000591126 ARMS2P0C7Q2 107 aa4.85□□□□□ -1.63
SMAD4-212ENST00000591126 GYPEP15421 78 aa4.85□□□□□ -1.63
SMAD4-212ENST00000591126 CHCHD1Q96BP2 118 aaKnown RBP4.85□□□□□ -1.63
SMAD4-212ENST00000591126 ZNF414Q96IQ9 312 aa4.85□□□□□ -1.63
SMAD4-212ENST00000591126 MAP6D1Q9H9H5 199 aa4.85□□□□□ -1.63
SMAD4-212ENST00000591126 U3KQE9 123 aa4.85□□□□□ -1.63
SMAD4-212ENST00000591126 FREM3P0C091 2139 aa4.85□□□□□ -1.63
SMAD4-212ENST00000591126 TRAV4A0A0B4J268 109 aa4.85□□□□□ -1.63
SMAD4-212ENST00000591126 MYMXA0A1B0GTQ4 84 aa4.85□□□□□ -1.63
SMAD4-212ENST00000591126 WI2-2373I1.2A0A1W2PRP0 233 aa4.85□□□□□ -1.63
SMAD4-212ENST00000591126 K7EIM0 57 aa4.85□□□□□ -1.63
SMAD4-212ENST00000591126 BUB3O43684 328 aa4.85□□□□□ -1.63
SMAD4-212ENST00000591126 FABP4P15090 132 aa4.85□□□□□ -1.63
SMAD4-212ENST00000591126 CXCL5P42830 114 aa4.85□□□□□ -1.63
SMAD4-212ENST00000591126 KRTAP10-9P60411 292 aa4.85□□□□□ -1.63
SMAD4-212ENST00000591126 C9orf62Q8N4C0 152 aa4.85□□□□□ -1.63
SMAD4-212ENST00000591126 C7orf33Q8WU49 177 aa4.85□□□□□ -1.63
SMAD4-212ENST00000591126 CHTOPQ9Y3Y2 248 aaKnown RBP4.85□□□□□ -1.63
SMAD4-212ENST00000591126 SCO2A0A1W2PP80 73 aa4.85□□□□□ -1.63
SMAD4-212ENST00000591126 PRSS46E5RG02 174 aa4.85□□□□□ -1.63
SMAD4-212ENST00000591126 K7EQD1 137 aa4.85□□□□□ -1.63
SMAD4-212ENST00000591126 COL4A2P08572 1712 aa4.85□□□□□ -1.63
SMAD4-212ENST00000591126 C5orf52A6NGY3 159 aa4.84□□□□□ -1.63
SMAD4-212ENST00000591126 HIGD1CA8MV81 97 aa4.84□□□□□ -1.63
SMAD4-212ENST00000591126 NXPH4O95158 308 aa4.84□□□□□ -1.63
SMAD4-212ENST00000591126 FSHBP01225 129 aa4.84□□□□□ -1.63
SMAD4-212ENST00000591126 HBDP02042 147 aa4.84□□□□□ -1.63
SMAD4-212ENST00000591126 ANGP03950 147 aaKnown RBP4.84□□□□□ -1.63
SMAD4-212ENST00000591126 TMEM61Q8N0U2 210 aa4.84□□□□□ -1.63
SMAD4-212ENST00000591126 EXOC3-AS1Q8N2X6 119 aa4.84□□□□□ -1.63
SMAD4-212ENST00000591126 ZNF524Q96C55 264 aa4.84□□□□□ -1.63
SMAD4-212ENST00000591126 C20orf78Q9BR46 151 aa4.84□□□□□ -1.63
SMAD4-212ENST00000591126 HHLA3Q9XRX5 114 aa4.84□□□□□ -1.63
SMAD4-212ENST00000591126 H7C423 109 aa4.84□□□□□ -1.63
SMAD4-212ENST00000591126 SNRPCP09234 159 aaKnown RBP4.84□□□□□ -1.63
SMAD4-212ENST00000591126 C4orf48Q5BLP8 95 aa4.84□□□□□ -1.63
SMAD4-212ENST00000591126 LURAP1LQ8IV03 231 aa4.84□□□□□ -1.63
SMAD4-212ENST00000591126 NIT2Q9NQR4 276 aa4.84□□□□□ -1.63
SMAD4-212ENST00000591126 H3BQ85 93 aa4.84□□□□□ -1.63
SMAD4-212ENST00000591126 IGLV2-23P01705 113 aa4.84□□□□□ -1.63
SMAD4-212ENST00000591126 PHLDA1Q8WV24 401 aaPredicted RBP4.84□□□□□ -1.63
SMAD4-212ENST00000591126 MRPL36Q9P0J6 103 aaKnown RBP4.84□□□□□ -1.63
SMAD4-212ENST00000591126 DOCK10Q96BY6 2186 aa4.84□□□□□ -1.64
SMAD4-212ENST00000591126 H2BFSP57053 126 aa4.84□□□□□ -1.64
SMAD4-212ENST00000591126 ZNRF2Q8NHG8 242 aa4.84□□□□□ -1.64
SMAD4-212ENST00000591126 ZNF25P17030 456 aaPredicted RBP4.83□□□□□ -1.64
SMAD4-212ENST00000591126 HERVK_113P63121 156 aa4.83□□□□□ -1.64
SMAD4-212ENST00000591126 GNG5P63218 68 aa4.83□□□□□ -1.64
SMAD4-212ENST00000591126 C9orf47Q6ZRZ4 202 aa4.83□□□□□ -1.64
SMAD4-212ENST00000591126 C8orf49Q96NF6 230 aa4.83□□□□□ -1.64
SMAD4-212ENST00000591126 BDP1A6H8Y1 2624 aa4.83□□□□□ -1.64
SMAD4-212ENST00000591126 IGLV1-40P01703 118 aa4.83□□□□□ -1.64
SMAD4-212ENST00000591126 SSBP2P81877 361 aaPredicted RBP4.83□□□□□ -1.64
SMAD4-212ENST00000591126 MSMPQ1L6U9 139 aa4.83□□□□□ -1.64
SMAD4-212ENST00000591126 ZFP2Q6ZN57 461 aa4.83□□□□□ -1.64
SMAD4-212ENST00000591126 Q8N6K4 173 aa4.83□□□□□ -1.64
SMAD4-212ENST00000591126 DERL1Q9BUN8 251 aa4.83□□□□□ -1.64
SMAD4-212ENST00000591126 VSIRQ9H7M9 311 aa4.83□□□□□ -1.64
SMAD4-212ENST00000591126 TEX22C9J3V5 150 aa4.83□□□□□ -1.64
SMAD4-212ENST00000591126 H0YIZ8 118 aa4.83□□□□□ -1.64
SMAD4-212ENST00000591126 DIAPH2-AS1Q14236 149 aa4.83□□□□□ -1.64
SMAD4-212ENST00000591126 GNB1LQ9BYB4 327 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms