RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 EDA2RQ9HAV5 297 aa13.83□□□□□ -0.2
DDX39A-214ENST00000590556 SCO2A0A1W2PP80 73 aa13.82□□□□□ -0.2
DDX39A-214ENST00000590556 ZNF705GA8MUZ8 300 aaPredicted RBP13.82□□□□□ -0.2
DDX39A-214ENST00000590556 TAGLN2P37802 199 aaKnown RBP13.82□□□□□ -0.2
DDX39A-214ENST00000590556 AKR1C3P42330 323 aa13.82□□□□□ -0.2
DDX39A-214ENST00000590556 RRN3P1Q2M238 152 aa13.82□□□□□ -0.2
DDX39A-214ENST00000590556 FMC1Q96HJ9 113 aa13.82□□□□□ -0.2
DDX39A-214ENST00000590556 C11orf68Q9H3H3 251 aaKnown RBP13.82□□□□□ -0.2
DDX39A-214ENST00000590556 VAX2Q9UIW0 290 aa13.82□□□□□ -0.2
DDX39A-214ENST00000590556 ZNF324O75467 553 aaPredicted RBP13.81□□□□□ -0.2
DDX39A-214ENST00000590556 HTN1P15515 57 aa13.81□□□□□ -0.2
DDX39A-214ENST00000590556 TAS2R60P59551 318 aa13.81□□□□□ -0.2
DDX39A-214ENST00000590556 UBE2G1P62253 170 aa13.81□□□□□ -0.2
DDX39A-214ENST00000590556 MEF2BQ02080 365 aaPredicted RBP13.81□□□□□ -0.2
DDX39A-214ENST00000590556 SAPCD1Q5SSQ6 148 aa13.81□□□□□ -0.2
DDX39A-214ENST00000590556 KLF12Q9Y4X4 402 aa13.81□□□□□ -0.2
DDX39A-214ENST00000590556 PRM2P04554 102 aa13.8□□□□□ -0.2
DDX39A-214ENST00000590556 Q86TA4 180 aa13.8□□□□□ -0.2
DDX39A-214ENST00000590556 PCNPQ8WW12 178 aaKnown RBP13.8□□□□□ -0.2
DDX39A-214ENST00000590556 WWC2-AS2Q96NR7 200 aa13.8□□□□□ -0.2
DDX39A-214ENST00000590556 LOC102723971A0A1B0GUV8 181 aa13.79□□□□□ -0.2
DDX39A-214ENST00000590556 PDE6DO43924 150 aa13.79□□□□□ -0.2
DDX39A-214ENST00000590556 S100A9P06702 114 aaKnown RBP13.79□□□□□ -0.2
DDX39A-214ENST00000590556 TMEM183BQ1AE95 376 aa13.79□□□□□ -0.2
DDX39A-214ENST00000590556 C2CD4CQ8TF44 421 aa13.79□□□□□ -0.2
DDX39A-214ENST00000590556 C8orf49Q96NF6 230 aa13.79□□□□□ -0.2
DDX39A-214ENST00000590556 PYGO2Q9BRQ0 406 aa13.79□□□□□ -0.2
DDX39A-214ENST00000590556 TRBV6-1A0A0K0K1D8 114 aa13.78□□□□□ -0.2
DDX39A-214ENST00000590556 TMEM189A5PLL7 270 aa13.78□□□□□ -0.2
DDX39A-214ENST00000590556 RBFOX3A6NFN3 312 aa13.78□□□□□ -0.2
DDX39A-214ENST00000590556 EMP1P54849 157 aa13.78□□□□□ -0.2
DDX39A-214ENST00000590556 SMUG1Q53HV7 270 aa13.78□□□□□ -0.2
DDX39A-214ENST00000590556 Q6AWC8 147 aa13.78□□□□□ -0.2
DDX39A-214ENST00000590556 Q6ZQT7 251 aa13.78□□□□□ -0.2
DDX39A-214ENST00000590556 C11orf52Q96A22 123 aa13.78□□□□□ -0.2
DDX39A-214ENST00000590556 ZFP30Q9Y2G7 519 aa13.78□□□□□ -0.2
DDX39A-214ENST00000590556 RGS13O14921 159 aa13.77□□□□□ -0.21
DDX39A-214ENST00000590556 AZU1P20160 251 aa13.77□□□□□ -0.21
DDX39A-214ENST00000590556 TRAV21A0A0B4J279 112 aa13.76□□□□□ -0.21
DDX39A-214ENST00000590556 GCGP01275 180 aa13.76□□□□□ -0.21
DDX39A-214ENST00000590556 ZNF506Q5JVG8 444 aa13.76□□□□□ -0.21
DDX39A-214ENST00000590556 LINC00467Q9BRT7 94 aa13.76□□□□□ -0.21
DDX39A-214ENST00000590556 MED9Q9NWA0 146 aa13.76□□□□□ -0.21
DDX39A-214ENST00000590556 IGHV1OR15-1A0A075B7D0 117 aa13.75□□□□□ -0.21
DDX39A-214ENST00000590556 LTAP01374 205 aa13.75□□□□□ -0.21
DDX39A-214ENST00000590556 RPL35P42766 123 aaKnown RBP13.75□□□□□ -0.21
DDX39A-214ENST00000590556 ZNF493Q6ZR52 646 aa13.75□□□□□ -0.21
DDX39A-214ENST00000590556 EIF4E3Q8N5X7 224 aaKnown RBP13.75□□□□□ -0.21
DDX39A-214ENST00000590556 C16orf74Q96GX8 76 aa13.75□□□□□ -0.21
DDX39A-214ENST00000590556 EIF5A2Q9GZV4 153 aaKnown RBP13.75□□□□□ -0.21
DDX39A-214ENST00000590556 CBY3A6NI87 242 aa13.74□□□□□ -0.21
DDX39A-214ENST00000590556 ZNF80P51504 273 aaPredicted RBP13.74□□□□□ -0.21
DDX39A-214ENST00000590556 RAB14P61106 215 aa13.74□□□□□ -0.21
DDX39A-214ENST00000590556 TOR2AQ5JU69 321 aa13.74□□□□□ -0.21
DDX39A-214ENST00000590556 MUC21Q5SSG8 566 aa13.74□□□□□ -0.21
DDX39A-214ENST00000590556 IL17DQ8TAD2 202 aa13.74□□□□□ -0.21
DDX39A-214ENST00000590556 C11orf45Q8TAV5 145 aa13.74□□□□□ -0.21
DDX39A-214ENST00000590556 TMEM263Q8WUH6 116 aaKnown RBP13.74□□□□□ -0.21
DDX39A-214ENST00000590556 FAM210AQ96ND0 272 aa13.74□□□□□ -0.21
DDX39A-214ENST00000590556 DERL1Q9BUN8 251 aa13.74□□□□□ -0.21
DDX39A-214ENST00000590556 FAM159AQ6UWV7 190 aa13.73□□□□□ -0.21
DDX39A-214ENST00000590556 ZNF767PQ75MW2 155 aa13.73□□□□□ -0.21
DDX39A-214ENST00000590556 BAGE2Q86Y30 109 aa13.73□□□□□ -0.21
DDX39A-214ENST00000590556 TMEM183AQ8IXX5 376 aa13.73□□□□□ -0.21
DDX39A-214ENST00000590556 RNASE8Q8TDE3 154 aaKnown RBP13.73□□□□□ -0.21
DDX39A-214ENST00000590556 NAGKQ9UJ70 344 aa13.73□□□□□ -0.21
DDX39A-214ENST00000590556 CXorf65A6NEN9 183 aa13.72□□□□□ -0.21
DDX39A-214ENST00000590556 PFN1P07737 140 aaKnown RBP13.72□□□□□ -0.21
DDX39A-214ENST00000590556 SPART-AS1P0CW21 52 aa13.72□□□□□ -0.21
DDX39A-214ENST00000590556 IFITM2Q01629 132 aa13.72□□□□□ -0.21
DDX39A-214ENST00000590556 ANXA2RQ3ZCQ2 193 aa13.72□□□□□ -0.21
DDX39A-214ENST00000590556 COX8CQ7Z4L0 72 aa13.72□□□□□ -0.21
DDX39A-214ENST00000590556 ZC2HC1AQ96GY0 325 aa13.72□□□□□ -0.21
DDX39A-214ENST00000590556 DNAH7Q8WXX0 4024 aa13.72□□□□□ -0.21
DDX39A-214ENST00000590556 PLAC8L1A1L4L8 177 aa13.71□□□□□ -0.21
DDX39A-214ENST00000590556 NHLRC2Q8NBF2 726 aa13.71□□□□□ -0.21
DDX39A-214ENST00000590556 MUC7Q8TAX7 377 aa13.71□□□□□ -0.21
DDX39A-214ENST00000590556 TP53TG3Q9ULZ0 132 aa13.71□□□□□ -0.21
DDX39A-214ENST00000590556 CELA1Q9UNI1 258 aa13.71□□□□□ -0.21
DDX39A-214ENST00000590556 TEX48A0A1B0GUV7 120 aa13.7□□□□□ -0.22
DDX39A-214ENST00000590556 RAB19A4D1S5 217 aa13.7□□□□□ -0.22
DDX39A-214ENST00000590556 FABP5P3A8MUU1 101 aa13.7□□□□□ -0.22
DDX39A-214ENST00000590556 TMEM250H0YL14 139 aa13.7□□□□□ -0.22
DDX39A-214ENST00000590556 NANOS2P60321 138 aaKnown RBP13.7□□□□□ -0.22
DDX39A-214ENST00000590556 CENPWQ5EE01 88 aa13.7□□□□□ -0.22
DDX39A-214ENST00000590556 FAM222AQ5U5X8 452 aa13.7□□□□□ -0.22
DDX39A-214ENST00000590556 DKK2Q9UBU2 259 aa13.7□□□□□ -0.22
DDX39A-214ENST00000590556 SNURFLB1AK76 121 aa13.69□□□□□ -0.22
DDX39A-214ENST00000590556 GNG4P50150 75 aa13.69□□□□□ -0.22
DDX39A-214ENST00000590556 TDRG1Q3Y452 100 aa13.69□□□□□ -0.22
DDX39A-214ENST00000590556 FAM162BQ5T6X4 162 aa13.69□□□□□ -0.22
DDX39A-214ENST00000590556 KCNS1Q96KK3 526 aa13.69□□□□□ -0.22
DDX39A-214ENST00000590556 MLST8Q9BVC4 326 aa13.69□□□□□ -0.22
DDX39A-214ENST00000590556 SDF2L1Q9HCN8 221 aa13.69□□□□□ -0.22
DDX39A-214ENST00000590556 NOP10Q9NPE3 64 aaKnown RBP13.69□□□□□ -0.22
DDX39A-214ENST00000590556 GSN-AS1Q9NRJ2 163 aa13.69□□□□□ -0.22
DDX39A-214ENST00000590556 C11orf21Q9P2W6 132 aa13.69□□□□□ -0.22
DDX39A-214ENST00000590556 TIMM8BQ9Y5J9 83 aaPredicted RBP13.69□□□□□ -0.22
DDX39A-214ENST00000590556 TRGV11A0A075B6L2 103 aa13.68□□□□□ -0.22
DDX39A-214ENST00000590556 LYRM9A8MSI8 78 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms