RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 NMBP08949 121 aa7.91□□□□□ -1.14
SMAD4-211ENST00000590499 RANP62826 216 aaKnown RBP7.91□□□□□ -1.14
SMAD4-211ENST00000590499 CD300CQ08708 224 aa7.91□□□□□ -1.14
SMAD4-211ENST00000590499 PRR9Q5T870 116 aa7.91□□□□□ -1.14
SMAD4-211ENST00000590499 LINC00612Q8N6U2 182 aa7.91□□□□□ -1.14
SMAD4-211ENST00000590499 INO80EQ8NBZ0 244 aaPredicted RBP7.91□□□□□ -1.14
SMAD4-211ENST00000590499 OR10G4Q8NGN3 311 aa7.91□□□□□ -1.14
SMAD4-211ENST00000590499 OR10G9Q8NGN4 311 aa7.91□□□□□ -1.14
SMAD4-211ENST00000590499 OR10G7Q8NGN6 311 aa7.91□□□□□ -1.14
SMAD4-211ENST00000590499 FAM210BQ96KR6 192 aa7.91□□□□□ -1.14
SMAD4-211ENST00000590499 PYGO2Q9BRQ0 406 aa7.91□□□□□ -1.14
SMAD4-211ENST00000590499 NDUFAF3Q9BU61 184 aa7.91□□□□□ -1.14
SMAD4-211ENST00000590499 KRTAP3-1Q9BYR8 98 aa7.91□□□□□ -1.14
SMAD4-211ENST00000590499 SH3BGRL3Q9H299 93 aa7.91□□□□□ -1.14
SMAD4-211ENST00000590499 FAT2Q9NYQ8 4349 aa7.91□□□□□ -1.14
SMAD4-211ENST00000590499 A0A1W2PPV4 95 aa7.9□□□□□ -1.14
SMAD4-211ENST00000590499 RBAKDNA6NC62 111 aa7.9□□□□□ -1.14
SMAD4-211ENST00000590499 STAG3L2P0CL84 134 aa7.9□□□□□ -1.14
SMAD4-211ENST00000590499 STAG3L3P0CL85 134 aa7.9□□□□□ -1.14
SMAD4-211ENST00000590499 HTN1P15515 57 aa7.9□□□□□ -1.14
SMAD4-211ENST00000590499 CDC34P49427 236 aaPredicted RBP7.9□□□□□ -1.14
SMAD4-211ENST00000590499 SERF2P84101 59 aa7.9□□□□□ -1.14
SMAD4-211ENST00000590499 BTN1A1Q13410 526 aa7.9□□□□□ -1.14
SMAD4-211ENST00000590499 TMEM78Q5T7P6 136 aa7.9□□□□□ -1.14
SMAD4-211ENST00000590499 RPL7L1Q6DKI1 246 aaKnown RBP7.9□□□□□ -1.14
SMAD4-211ENST00000590499 LINC00467Q9BRT7 94 aa7.9□□□□□ -1.14
SMAD4-211ENST00000590499 OTORQ9NRC9 128 aa7.9□□□□□ -1.14
SMAD4-211ENST00000590499 TIMM8BQ9Y5J9 83 aaPredicted RBP7.9□□□□□ -1.14
SMAD4-211ENST00000590499 HECTD4Q9Y4D8 3996 aa7.89□□□□□ -1.15
SMAD4-211ENST00000590499 DIRC3C9JPN6 131 aa7.89□□□□□ -1.15
SMAD4-211ENST00000590499 HMGB3O15347 200 aaKnown RBP7.89□□□□□ -1.15
SMAD4-211ENST00000590499 ARL14EPLP0DKL9 152 aa7.89□□□□□ -1.15
SMAD4-211ENST00000590499 DEFB130BP0DP73 79 aa7.89□□□□□ -1.15
SMAD4-211ENST00000590499 DEFB130AP0DP74 79 aa7.89□□□□□ -1.15
SMAD4-211ENST00000590499 HTN3P15516 51 aa7.89□□□□□ -1.15
SMAD4-211ENST00000590499 CSN1S1P47710 185 aa7.89□□□□□ -1.15
SMAD4-211ENST00000590499 ZNF138P52744 262 aa7.89□□□□□ -1.15
SMAD4-211ENST00000590499 C11orf72Q8NBR9 251 aa7.89□□□□□ -1.15
SMAD4-211ENST00000590499 Q8TAT8 98 aa7.89□□□□□ -1.15
SMAD4-211ENST00000590499 SUN5Q8TC36 379 aa7.89□□□□□ -1.15
SMAD4-211ENST00000590499 RAB24Q969Q5 203 aa7.89□□□□□ -1.15
SMAD4-211ENST00000590499 NOP10Q9NPE3 64 aaKnown RBP7.89□□□□□ -1.15
SMAD4-211ENST00000590499 NACAE9PAV3 2078 aa7.89□□□□□ -1.15
SMAD4-211ENST00000590499 MUC4Q99102 2169 aa7.88□□□□□ -1.15
SMAD4-211ENST00000590499 MBP02144 154 aa7.88□□□□□ -1.15
SMAD4-211ENST00000590499 RNASE4P34096 147 aaKnown RBP7.88□□□□□ -1.15
SMAD4-211ENST00000590499 ANXA2RQ3ZCQ2 193 aa7.88□□□□□ -1.15
SMAD4-211ENST00000590499 TMEM88Q6PEY1 159 aa7.88□□□□□ -1.15
SMAD4-211ENST00000590499 Q6ZQT7 251 aa7.88□□□□□ -1.15
SMAD4-211ENST00000590499 SSX7Q7RTT5 188 aa7.88□□□□□ -1.15
SMAD4-211ENST00000590499 CCDC28AQ8IWP9 274 aa7.88□□□□□ -1.15
SMAD4-211ENST00000590499 ARL6IP6Q8N6S5 226 aa7.88□□□□□ -1.15
SMAD4-211ENST00000590499 RXFP4Q8TDU9 374 aa7.88□□□□□ -1.15
SMAD4-211ENST00000590499 TMED6Q8WW62 240 aa7.88□□□□□ -1.15
SMAD4-211ENST00000590499 GNPNAT1Q96EK6 184 aaPredicted RBP7.88□□□□□ -1.15
SMAD4-211ENST00000590499 CYTL1Q9NRR1 136 aa7.88□□□□□ -1.15
SMAD4-211ENST00000590499 BORCS7-ASMTA0A0B4J1R7 106 aa7.87□□□□□ -1.15
SMAD4-211ENST00000590499 PGPA6NDG6 321 aa7.87□□□□□ -1.15
SMAD4-211ENST00000590499 CBY3A6NI87 242 aa7.87□□□□□ -1.15
SMAD4-211ENST00000590499 SMLR1H3BR10 107 aa7.87□□□□□ -1.15
SMAD4-211ENST00000590499 ARPC5O15511 151 aa7.87□□□□□ -1.15
SMAD4-211ENST00000590499 GPX1P07203 203 aa7.87□□□□□ -1.15
SMAD4-211ENST00000590499 P0DMU3 169 aa7.87□□□□□ -1.15
SMAD4-211ENST00000590499 FAM231AP0DMU4 169 aa7.87□□□□□ -1.15
SMAD4-211ENST00000590499 FAM231CP0DMU5 169 aa7.87□□□□□ -1.15
SMAD4-211ENST00000590499 GCHFRP30047 84 aa7.87□□□□□ -1.15
SMAD4-211ENST00000590499 DAZ2Q13117 558 aaKnown RBP7.87□□□□□ -1.15
SMAD4-211ENST00000590499 ZNF726P1Q15940 193 aa7.87□□□□□ -1.15
SMAD4-211ENST00000590499 LENEPQ9Y5L5 61 aa7.87□□□□□ -1.15
SMAD4-211ENST00000590499 SNURFLB1AK76 121 aa7.86□□□□□ -1.15
SMAD4-211ENST00000590499 TAAR5O14804 337 aa7.86□□□□□ -1.15
SMAD4-211ENST00000590499 ATP5G1P05496 136 aa7.86□□□□□ -1.15
SMAD4-211ENST00000590499 ATP5G3P48201 142 aa7.86□□□□□ -1.15
SMAD4-211ENST00000590499 EIF4E3Q8N5X7 224 aaKnown RBP7.86□□□□□ -1.15
SMAD4-211ENST00000590499 POM121L12Q8N7R1 296 aa7.86□□□□□ -1.15
SMAD4-211ENST00000590499 ZNF680Q8NEM1 530 aa7.86□□□□□ -1.15
SMAD4-211ENST00000590499 ST6GAL2Q96JF0 529 aa7.86□□□□□ -1.15
SMAD4-211ENST00000590499 HYLS1Q96M11 299 aa7.86□□□□□ -1.15
SMAD4-211ENST00000590499 IGHV1OR15-1A0A075B7D0 117 aa7.85□□□□□ -1.15
SMAD4-211ENST00000590499 GGTLC3B5MD39 225 aa7.85□□□□□ -1.15
SMAD4-211ENST00000590499 GNG5P63218 68 aa7.85□□□□□ -1.15
SMAD4-211ENST00000590499 ZNF345Q14585 488 aa7.85□□□□□ -1.15
SMAD4-211ENST00000590499 FAM74A1Q5RGS3 127 aa7.85□□□□□ -1.15
SMAD4-211ENST00000590499 Q6AWC8 147 aa7.85□□□□□ -1.15
SMAD4-211ENST00000590499 Q6ZTI0 123 aa7.85□□□□□ -1.15
SMAD4-211ENST00000590499 GOLT1AQ6ZVE7 132 aa7.85□□□□□ -1.15
SMAD4-211ENST00000590499 C15orf53Q8NAA6 179 aa7.85□□□□□ -1.15
SMAD4-211ENST00000590499 NUDT10Q8NFP7 164 aa7.85□□□□□ -1.15
SMAD4-211ENST00000590499 OR11H4Q8NGC9 324 aa7.85□□□□□ -1.15
SMAD4-211ENST00000590499 CMTM2Q8TAZ6 248 aa7.85□□□□□ -1.15
SMAD4-211ENST00000590499 NUDT11Q96G61 164 aa7.85□□□□□ -1.15
SMAD4-211ENST00000590499 ACTR3CQ9C0K3 210 aaPredicted RBP7.85□□□□□ -1.15
SMAD4-211ENST00000590499 GSN-AS1Q9NRJ2 163 aa7.85□□□□□ -1.15
SMAD4-211ENST00000590499 TP53TG3Q9ULZ0 132 aa7.85□□□□□ -1.15
SMAD4-211ENST00000590499 TRAV8-1A0A0A6YYK1 113 aa7.84□□□□□ -1.15
SMAD4-211ENST00000590499 F5H768 121 aa7.84□□□□□ -1.15
SMAD4-211ENST00000590499 CXorf1O96002 111 aa7.84□□□□□ -1.15
SMAD4-211ENST00000590499 TCL1AP56279 114 aa7.84□□□□□ -1.15
SMAD4-211ENST00000590499 IBA57Q5T440 356 aaKnown RBP7.84□□□□□ -1.15
SMAD4-211ENST00000590499 KCNRGQ8N5I3 272 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms