RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 TRAV9-2A0A087WT02 112 aa11.38□□□□□ -0.59
RETREG3-208ENST00000589797 TRBV12-3P01733 135 aa11.38□□□□□ -0.59
RETREG3-208ENST00000589797 PRSS2P07478 247 aa11.38□□□□□ -0.59
RETREG3-208ENST00000589797 KLHL30-AS1Q8NEE0 82 aa11.38□□□□□ -0.59
RETREG3-208ENST00000589797 IFI27L1Q96BM0 104 aa11.38□□□□□ -0.59
RETREG3-208ENST00000589797 C1orf159Q96HA4 380 aa11.38□□□□□ -0.59
RETREG3-208ENST00000589797 RAX2Q96IS3 184 aa11.38□□□□□ -0.59
RETREG3-208ENST00000589797 JMJD8Q96S16 334 aa11.38□□□□□ -0.59
RETREG3-208ENST00000589797 TSPOP30536 169 aa11.38□□□□□ -0.59
RETREG3-208ENST00000589797 SPINK13Q1W4C9 94 aa11.38□□□□□ -0.59
RETREG3-208ENST00000589797 UBE2E2Q96LR5 201 aa11.38□□□□□ -0.59
RETREG3-208ENST00000589797 KNCNA6PVL3 124 aa11.38□□□□□ -0.59
RETREG3-208ENST00000589797 HBDP02042 147 aa11.38□□□□□ -0.59
RETREG3-208ENST00000589797 EGR2P11161 476 aaPredicted RBP11.38□□□□□ -0.59
RETREG3-208ENST00000589797 STPG4Q8N801 248 aa11.38□□□□□ -0.59
RETREG3-208ENST00000589797 SYT8Q8NBV8 401 aa11.38□□□□□ -0.59
RETREG3-208ENST00000589797 PDE6HQ13956 83 aa11.37□□□□□ -0.59
RETREG3-208ENST00000589797 C1orf194Q5T5A4 169 aa11.37□□□□□ -0.59
RETREG3-208ENST00000589797 AGPAT4-IT1Q9H0P7 198 aa11.37□□□□□ -0.59
RETREG3-208ENST00000589797 CFAP46Q8IYW2 2715 aa11.37□□□□□ -0.59
RETREG3-208ENST00000589797 TET2Q6N021 2002 aaPredicted RBP11.37□□□□□ -0.59
RETREG3-208ENST00000589797 DMDP11532 3685 aa11.37□□□□□ -0.59
RETREG3-208ENST00000589797 HOXA3O43365 443 aaPredicted RBP11.37□□□□□ -0.59
RETREG3-208ENST00000589797 FOXE3Q13461 319 aa11.37□□□□□ -0.59
RETREG3-208ENST00000589797 NDUFS8O00217 210 aa11.37□□□□□ -0.59
RETREG3-208ENST00000589797 EREGO14944 169 aa11.37□□□□□ -0.59
RETREG3-208ENST00000589797 GATA1P15976 413 aaPredicted RBP11.37□□□□□ -0.59
RETREG3-208ENST00000589797 MRPL27Q9P0M9 148 aaKnown RBP11.37□□□□□ -0.59
RETREG3-208ENST00000589797 IGKV3D-20A0A0C4DH25 116 aa11.36□□□□□ -0.59
RETREG3-208ENST00000589797 PF4P02776 101 aa11.36□□□□□ -0.59
RETREG3-208ENST00000589797 KLK9Q9UKQ9 250 aa11.36□□□□□ -0.59
RETREG3-208ENST00000589797 SLC25A16P16260 332 aa11.36□□□□□ -0.59
RETREG3-208ENST00000589797 DEFB131AP59861 70 aa11.36□□□□□ -0.59
RETREG3-208ENST00000589797 Q0VG73 95 aa11.36□□□□□ -0.59
RETREG3-208ENST00000589797 C9orf139Q6ZV77 190 aa11.36□□□□□ -0.59
RETREG3-208ENST00000589797 NEGR1Q7Z3B1 354 aa11.36□□□□□ -0.59
RETREG3-208ENST00000589797 C10orf105Q8TEF2 133 aa11.36□□□□□ -0.59
RETREG3-208ENST00000589797 WIPF2Q8TF74 440 aaPredicted RBP11.36□□□□□ -0.59
RETREG3-208ENST00000589797 GTSF1Q8WW33 167 aa11.36□□□□□ -0.59
RETREG3-208ENST00000589797 USMG5Q96IX5 58 aa11.36□□□□□ -0.59
RETREG3-208ENST00000589797 SIRPDQ9H106 197 aa11.36□□□□□ -0.59
RETREG3-208ENST00000589797 DSCR9P59020 149 aa11.35□□□□□ -0.59
RETREG3-208ENST00000589797 NPBQ8NG41 125 aa11.35□□□□□ -0.59
RETREG3-208ENST00000589797 HIST1H4GQ99525 98 aa11.35□□□□□ -0.59
RETREG3-208ENST00000589797 A0A087X0K7 114 aa11.35□□□□□ -0.59
RETREG3-208ENST00000589797 SYS1-DBNDD2H3BUS1 97 aa11.35□□□□□ -0.59
RETREG3-208ENST00000589797 LTAP01374 205 aa11.35□□□□□ -0.59
RETREG3-208ENST00000589797 DNLZQ5SXM8 178 aa11.35□□□□□ -0.59
RETREG3-208ENST00000589797 LINC00173Q6ZV60 143 aa11.35□□□□□ -0.59
RETREG3-208ENST00000589797 DCHS1Q96JQ0 3298 aa11.35□□□□□ -0.59
RETREG3-208ENST00000589797 TMEM14CQ9P0S9 112 aa11.35□□□□□ -0.59
RETREG3-208ENST00000589797 CBY1Q9Y3M2 126 aa11.35□□□□□ -0.59
RETREG3-208ENST00000589797 TACC2O95359 2948 aa11.35□□□□□ -0.59
RETREG3-208ENST00000589797 A0A1B0GW15 77 aa11.34□□□□□ -0.59
RETREG3-208ENST00000589797 C12orf54Q6X4T0 127 aa11.34□□□□□ -0.59
RETREG3-208ENST00000589797 FAM231DQ6ZW35 169 aa11.34□□□□□ -0.59
RETREG3-208ENST00000589797 IGHV3-64A0A075B6Q5 118 aa11.34□□□□□ -0.59
RETREG3-208ENST00000589797 OVOL1O14753 267 aa11.34□□□□□ -0.59
RETREG3-208ENST00000589797 RRN3P1Q2M238 152 aa11.34□□□□□ -0.59
RETREG3-208ENST00000589797 UNQ9165/PRO28630Q6UXU0 137 aa11.34□□□□□ -0.59
RETREG3-208ENST00000589797 GTSCR1Q86UQ5 136 aa11.34□□□□□ -0.59
RETREG3-208ENST00000589797 FAM223BA6NKX1 122 aa11.34□□□□□ -0.59
RETREG3-208ENST00000589797 FAM223AQ8IWN6 122 aa11.34□□□□□ -0.59
RETREG3-208ENST00000589797 IGF2BP2-AS1Q96M15 143 aa11.34□□□□□ -0.59
RETREG3-208ENST00000589797 CRYGCP07315 174 aa11.33□□□□□ -0.59
RETREG3-208ENST00000589797 TMEM158Q8WZ71 300 aa11.33□□□□□ -0.59
RETREG3-208ENST00000589797 CFHR4Q92496 578 aa11.33□□□□□ -0.59
RETREG3-208ENST00000589797 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.33□□□□□ -0.6
RETREG3-208ENST00000589797 IGHV3-53P01767 116 aa11.33□□□□□ -0.6
RETREG3-208ENST00000589797 MRPL51Q4U2R6 128 aaKnown RBP11.33□□□□□ -0.6
RETREG3-208ENST00000589797 LY6G5BQ8NDX9 201 aa11.33□□□□□ -0.6
RETREG3-208ENST00000589797 MPV17L2Q567V2 206 aa11.33□□□□□ -0.6
RETREG3-208ENST00000589797 BUB3O43684 328 aa11.32□□□□□ -0.6
RETREG3-208ENST00000589797 PAX1P15863 534 aa11.32□□□□□ -0.6
RETREG3-208ENST00000589797 FAM104BQ5XKR9 115 aa11.32□□□□□ -0.6
RETREG3-208ENST00000589797 C5orf56Q8N8D9 126 aa11.32□□□□□ -0.6
RETREG3-208ENST00000589797 CHCHD1Q96BP2 118 aaKnown RBP11.32□□□□□ -0.6
RETREG3-208ENST00000589797 AJUBAQ96IF1 538 aa11.32□□□□□ -0.6
RETREG3-208ENST00000589797 PRORYQ9H606 182 aa11.32□□□□□ -0.6
RETREG3-208ENST00000589797 ZNF492Q9P255 531 aa11.32□□□□□ -0.6
RETREG3-208ENST00000589797 LOC107984156A0A0G2JMH3 177 aa11.32□□□□□ -0.6
RETREG3-208ENST00000589797 OR11H12B2RN74 326 aa11.32□□□□□ -0.6
RETREG3-208ENST00000589797 GNRH2O43555 120 aa11.32□□□□□ -0.6
RETREG3-208ENST00000589797 NPYP01303 97 aa11.32□□□□□ -0.6
RETREG3-208ENST00000589797 PCP4P48539 62 aa11.32□□□□□ -0.6
RETREG3-208ENST00000589797 ARL17AQ8IVW1 177 aa11.32□□□□□ -0.6
RETREG3-208ENST00000589797 OR11H1Q8NG94 326 aa11.32□□□□□ -0.6
RETREG3-208ENST00000589797 OR11H2Q8NH07 326 aa11.32□□□□□ -0.6
RETREG3-208ENST00000589797 ZNF418Q8TF45 676 aaPredicted RBP11.32□□□□□ -0.6
RETREG3-208ENST00000589797 A6NDN8 102 aa11.32□□□□□ -0.6
RETREG3-208ENST00000589797 TNFRSF6BO95407 300 aa11.32□□□□□ -0.6
RETREG3-208ENST00000589797 HERVK_113P61574 105 aa11.32□□□□□ -0.6
RETREG3-208ENST00000589797 ANXA2RQ3ZCQ2 193 aa11.32□□□□□ -0.6
RETREG3-208ENST00000589797 RASL11AQ6T310 242 aa11.32□□□□□ -0.6
RETREG3-208ENST00000589797 IGLV2-8P01709 118 aa11.31□□□□□ -0.6
RETREG3-208ENST00000589797 TNFRSF18Q9Y5U5 241 aa11.31□□□□□ -0.6
RETREG3-208ENST00000589797 CD300EQ496F6 205 aaPredicted RBP11.31□□□□□ -0.6
RETREG3-208ENST00000589797 TCTEX1D4Q5JR98 221 aa11.31□□□□□ -0.6
RETREG3-208ENST00000589797 SAP30O75446 220 aa11.31□□□□□ -0.6
RETREG3-208ENST00000589797 XCL2Q9UBD3 114 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms