RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 DCHS2Q6V1P9 2916 aa7.9□□□□□ -1.15
VPS25-203ENST00000589520 ZNF324O75467 553 aaPredicted RBP7.89□□□□□ -1.15
VPS25-203ENST00000589520 GZMBP10144 247 aa7.89□□□□□ -1.15
VPS25-203ENST00000589520 ERCC8Q13216 396 aa7.89□□□□□ -1.15
VPS25-203ENST00000589520 TMEM95Q3KNT9 176 aa7.89□□□□□ -1.15
VPS25-203ENST00000589520 LYZL1Q6UWQ5 148 aa7.89□□□□□ -1.15
VPS25-203ENST00000589520 Q8TAT8 98 aa7.89□□□□□ -1.15
VPS25-203ENST00000589520 TACC2O95359 2948 aa7.88□□□□□ -1.15
VPS25-203ENST00000589520 TRAV21A0A0B4J279 112 aa7.88□□□□□ -1.15
VPS25-203ENST00000589520 PCP4L1A6NKN8 68 aa7.88□□□□□ -1.15
VPS25-203ENST00000589520 NUPR1O60356 82 aa7.88□□□□□ -1.15
VPS25-203ENST00000589520 HSBP1O75506 76 aa7.88□□□□□ -1.15
VPS25-203ENST00000589520 ARMS2P0C7Q2 107 aa7.88□□□□□ -1.15
VPS25-203ENST00000589520 ZNF80P51504 273 aaPredicted RBP7.88□□□□□ -1.15
VPS25-203ENST00000589520 CACNG7P62955 275 aa7.88□□□□□ -1.15
VPS25-203ENST00000589520 LCNL1Q6ZST4 164 aa7.88□□□□□ -1.15
VPS25-203ENST00000589520 APRG1Q8IVJ8 170 aa7.88□□□□□ -1.15
VPS25-203ENST00000589520 OR8A1Q8NGG7 326 aa7.88□□□□□ -1.15
VPS25-203ENST00000589520 ODF3Q96PU9 254 aa7.88□□□□□ -1.15
VPS25-203ENST00000589520 GSN-AS1Q9NRJ2 163 aa7.88□□□□□ -1.15
VPS25-203ENST00000589520 FBN1P35555 2871 aaKnown RBP7.87□□□□□ -1.15
VPS25-203ENST00000589520 CR1P17927 2039 aa7.87□□□□□ -1.15
VPS25-203ENST00000589520 TRAV2A0A0B4J234 112 aa7.87□□□□□ -1.15
VPS25-203ENST00000589520 TMEM213A2RRL7 107 aa7.87□□□□□ -1.15
VPS25-203ENST00000589520 PPBPP02775 128 aa7.87□□□□□ -1.15
VPS25-203ENST00000589520 OR5AL1P0C617 328 aa7.87□□□□□ -1.15
VPS25-203ENST00000589520 AMTP48728 403 aa7.87□□□□□ -1.15
VPS25-203ENST00000589520 LINC00310P59036 64 aa7.87□□□□□ -1.15
VPS25-203ENST00000589520 PKIAP61925 76 aa7.87□□□□□ -1.15
VPS25-203ENST00000589520 SNRPD3P62318 126 aaKnown RBP7.87□□□□□ -1.15
VPS25-203ENST00000589520 FAM104BQ5XKR9 115 aa7.87□□□□□ -1.15
VPS25-203ENST00000589520 SMIM15Q7Z3B0 74 aa7.87□□□□□ -1.15
VPS25-203ENST00000589520 KLHDC1Q8N7A1 406 aa7.87□□□□□ -1.15
VPS25-203ENST00000589520 C4orf3Q8WVX3 66 aa7.87□□□□□ -1.15
VPS25-203ENST00000589520 FAM19A4Q96LR4 140 aa7.87□□□□□ -1.15
VPS25-203ENST00000589520 SSBP4Q9BWG4 385 aaPredicted RBP7.87□□□□□ -1.15
VPS25-203ENST00000589520 TMEM191AQ9H0A3 160 aa7.87□□□□□ -1.15
VPS25-203ENST00000589520 PEMTQ9UBM1 199 aa7.87□□□□□ -1.15
VPS25-203ENST00000589520 IGHV4-4A0A075B6R2 117 aa7.86□□□□□ -1.15
VPS25-203ENST00000589520 LINC01619G3V211 115 aa7.86□□□□□ -1.15
VPS25-203ENST00000589520 TSTD3H0UI37 97 aa7.86□□□□□ -1.15
VPS25-203ENST00000589520 SCGB1D1O95968 90 aa7.86□□□□□ -1.15
VPS25-203ENST00000589520 LINC00614P0C842 121 aa7.86□□□□□ -1.15
VPS25-203ENST00000589520 MED14OSP0DP75 135 aa7.86□□□□□ -1.15
VPS25-203ENST00000589520 HOXD3P31249 432 aaPredicted RBP7.86□□□□□ -1.15
VPS25-203ENST00000589520 TWIST1Q15672 202 aa7.86□□□□□ -1.15
VPS25-203ENST00000589520 NIT1Q86X76 327 aa7.86□□□□□ -1.15
VPS25-203ENST00000589520 DCANP1Q8TF63 244 aa7.86□□□□□ -1.15
VPS25-203ENST00000589520 DPF1Q92782 380 aa7.86□□□□□ -1.15
VPS25-203ENST00000589520 C20orf173Q96LM9 149 aa7.86□□□□□ -1.15
VPS25-203ENST00000589520 TPPP3Q9BW30 176 aa7.86□□□□□ -1.15
VPS25-203ENST00000589520 NAGKQ9UJ70 344 aa7.86□□□□□ -1.15
VPS25-203ENST00000589520 LAMTOR2Q9Y2Q5 125 aa7.86□□□□□ -1.15
VPS25-203ENST00000589520 U3KQK5 164 aa7.86□□□□□ -1.15
VPS25-203ENST00000589520 IGHV4OR15-8A0A075B7B6 117 aa7.85□□□□□ -1.15
VPS25-203ENST00000589520 A0A087WW49 117 aa7.85□□□□□ -1.15
VPS25-203ENST00000589520 TMSB15BA0A087X1C1 80 aa7.85□□□□□ -1.15
VPS25-203ENST00000589520 IGKV3D-20A0A0C4DH25 116 aa7.85□□□□□ -1.15
VPS25-203ENST00000589520 A0A1B0GUS0 222 aa7.85□□□□□ -1.15
VPS25-203ENST00000589520 SNAI2O43623 268 aa7.85□□□□□ -1.15
VPS25-203ENST00000589520 DUSP14O95147 198 aaKnown RBP7.85□□□□□ -1.15
VPS25-203ENST00000589520 Q71RC1 249 aaPredicted RBP7.85□□□□□ -1.15
VPS25-203ENST00000589520 MS4A6AQ9H2W1 248 aa7.85□□□□□ -1.15
VPS25-203ENST00000589520 C16orf95Q9H693 158 aa7.85□□□□□ -1.15
VPS25-203ENST00000589520 YAE1D1Q9NRH1 226 aa7.85□□□□□ -1.15
VPS25-203ENST00000589520 C2orf70A6NJV1 201 aa7.84□□□□□ -1.15
VPS25-203ENST00000589520 K7EQG2 157 aa7.84□□□□□ -1.15
VPS25-203ENST00000589520 M0R2Z0 102 aa7.84□□□□□ -1.15
VPS25-203ENST00000589520 RNASE1P07998 156 aaKnown RBP7.84□□□□□ -1.15
VPS25-203ENST00000589520 NTF3P20783 257 aa7.84□□□□□ -1.15
VPS25-203ENST00000589520 LEPP41159 167 aa7.84□□□□□ -1.15
VPS25-203ENST00000589520 SYNJ2BPP57105 145 aa7.84□□□□□ -1.15
VPS25-203ENST00000589520 EBLN2Q6P2I7 272 aa7.84□□□□□ -1.15
VPS25-203ENST00000589520 C10orf99Q6UWK7 81 aa7.84□□□□□ -1.15
VPS25-203ENST00000589520 Q6ZSV7 163 aa7.84□□□□□ -1.15
VPS25-203ENST00000589520 ORMDL3Q8N138 153 aa7.84□□□□□ -1.15
VPS25-203ENST00000589520 ZFAND2AQ8N6M9 145 aa7.84□□□□□ -1.15
VPS25-203ENST00000589520 OR1N2Q8NGR9 330 aa7.84□□□□□ -1.15
VPS25-203ENST00000589520 ZNF418Q8TF45 676 aaPredicted RBP7.84□□□□□ -1.15
VPS25-203ENST00000589520 RCHY1Q96PM5 261 aa7.84□□□□□ -1.15
VPS25-203ENST00000589520 JMJD8Q96S16 334 aa7.84□□□□□ -1.15
VPS25-203ENST00000589520 ATRQ13535 2644 aa7.83□□□□□ -1.16
VPS25-203ENST00000589520 CSPG4Q6UVK1 2322 aa7.83□□□□□ -1.16
VPS25-203ENST00000589520 FAM181BA6NEQ2 426 aa7.83□□□□□ -1.16
VPS25-203ENST00000589520 DNAJC9-AS1A6NH13 148 aa7.83□□□□□ -1.16
VPS25-203ENST00000589520 TSPOP30536 169 aa7.83□□□□□ -1.16
VPS25-203ENST00000589520 RNASEKQ6P5S7 137 aaKnown RBP7.83□□□□□ -1.16
VPS25-203ENST00000589520 Q6ZWC4 215 aa7.83□□□□□ -1.16
VPS25-203ENST00000589520 ZNF575Q86XF7 245 aa7.83□□□□□ -1.16
VPS25-203ENST00000589520 KLLNB2CW77 178 aa7.82□□□□□ -1.16
VPS25-203ENST00000589520 ZNF705DP0CH99 300 aaPredicted RBP7.82□□□□□ -1.16
VPS25-203ENST00000589520 ZNF705BP0CI00 300 aaPredicted RBP7.82□□□□□ -1.16
VPS25-203ENST00000589520 CKS2P33552 79 aa7.82□□□□□ -1.16
VPS25-203ENST00000589520 ASIPP42127 132 aa7.82□□□□□ -1.16
VPS25-203ENST00000589520 KRTAP1-1Q07627 177 aa7.82□□□□□ -1.16
VPS25-203ENST00000589520 PMCHL1Q16048 86 aa7.82□□□□□ -1.16
VPS25-203ENST00000589520 FOXI2Q6ZQN5 318 aa7.82□□□□□ -1.16
VPS25-203ENST00000589520 OR11H1Q8NG94 326 aa7.82□□□□□ -1.16
VPS25-203ENST00000589520 PRSS3P2Q8NHM4 247 aa7.82□□□□□ -1.16
VPS25-203ENST00000589520 PRELID3AQ96N28 172 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms