RNA–Protein interactions for RNA: ENST00000589116.1

CCBE1-203, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 1 (best)

Gene CCBE1, Length 1,691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-203ENST00000589116 HIGD1CA8MV81 97 aa9.04□□□□□ -0.96
CCBE1-203ENST00000589116 RPS20P60866 119 aaKnown RBP9.04□□□□□ -0.96
CCBE1-203ENST00000589116 HIST1H1AQ02539 215 aaPredicted RBP9.04□□□□□ -0.96
CCBE1-203ENST00000589116 DEFB114Q30KQ6 69 aa9.04□□□□□ -0.96
CCBE1-203ENST00000589116 RASL11AQ6T310 242 aa9.04□□□□□ -0.96
CCBE1-203ENST00000589116 NUP35Q8NFH5 326 aa9.04□□□□□ -0.96
CCBE1-203ENST00000589116 FABP5P3A8MUU1 101 aa9.04□□□□□ -0.96
CCBE1-203ENST00000589116 TRGC2P03986 189 aa9.04□□□□□ -0.96
CCBE1-203ENST00000589116 ZNF688P0C7X2 276 aa9.04□□□□□ -0.96
CCBE1-203ENST00000589116 TFPI2P48307 235 aa9.04□□□□□ -0.96
CCBE1-203ENST00000589116 PSMG4Q5JS54 123 aa9.04□□□□□ -0.96
CCBE1-203ENST00000589116 Q6AWC8 147 aa9.04□□□□□ -0.96
CCBE1-203ENST00000589116 C12orf54Q6X4T0 127 aa9.04□□□□□ -0.96
CCBE1-203ENST00000589116 ATP5L2Q7Z4Y8 100 aa9.04□□□□□ -0.96
CCBE1-203ENST00000589116 TMEM61Q8N0U2 210 aa9.04□□□□□ -0.96
CCBE1-203ENST00000589116 FAM19A4Q96LR4 140 aa9.04□□□□□ -0.96
CCBE1-203ENST00000589116 TMEM189A5PLL7 270 aa9.03□□□□□ -0.96
CCBE1-203ENST00000589116 MT-ND6P03923 174 aa9.03□□□□□ -0.96
CCBE1-203ENST00000589116 ZNF80P51504 273 aaPredicted RBP9.03□□□□□ -0.96
CCBE1-203ENST00000589116 FOXA3P55318 350 aaPredicted RBP9.03□□□□□ -0.96
CCBE1-203ENST00000589116 KRTAP10-3P60369 221 aa9.03□□□□□ -0.96
CCBE1-203ENST00000589116 NSUN5P1Q3KNT7 163 aa9.03□□□□□ -0.96
CCBE1-203ENST00000589116 ACTL10Q5JWF8 245 aa9.03□□□□□ -0.96
CCBE1-203ENST00000589116 WDR73Q6P4I2 378 aa9.03□□□□□ -0.96
CCBE1-203ENST00000589116 ODF3Q96PU9 254 aa9.03□□□□□ -0.96
CCBE1-203ENST00000589116 SPAG8Q99932 426 aaPredicted RBP9.03□□□□□ -0.96
CCBE1-203ENST00000589116 A0A0J9YX75 114 aa9.02□□□□□ -0.97
CCBE1-203ENST00000589116 OR4C46A6NHA9 309 aa9.02□□□□□ -0.97
CCBE1-203ENST00000589116 PHOX2AO14813 284 aa9.02□□□□□ -0.97
CCBE1-203ENST00000589116 ZNF705DP0CH99 300 aaPredicted RBP9.02□□□□□ -0.97
CCBE1-203ENST00000589116 ZNF705BP0CI00 300 aaPredicted RBP9.02□□□□□ -0.97
CCBE1-203ENST00000589116 CRISP2P16562 243 aa9.02□□□□□ -0.97
CCBE1-203ENST00000589116 LINC01559Q495D7 138 aa9.02□□□□□ -0.97
CCBE1-203ENST00000589116 EBLN2Q6P2I7 272 aa9.02□□□□□ -0.97
CCBE1-203ENST00000589116 FOXI2Q6ZQN5 318 aa9.02□□□□□ -0.97
CCBE1-203ENST00000589116 APRG1Q8IVJ8 170 aa9.02□□□□□ -0.97
CCBE1-203ENST00000589116 ZFP82Q8N141 532 aa9.02□□□□□ -0.97
CCBE1-203ENST00000589116 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.02□□□□□ -0.97
CCBE1-203ENST00000589116 GTSF1Q8WW33 167 aa9.02□□□□□ -0.97
CCBE1-203ENST00000589116 GNB1LQ9BYB4 327 aa9.02□□□□□ -0.97
CCBE1-203ENST00000589116 TGP01266 2768 aa9.01□□□□□ -0.97
CCBE1-203ENST00000589116 F6UB75 175 aa9.01□□□□□ -0.97
CCBE1-203ENST00000589116 DUSP14O95147 198 aaKnown RBP9.01□□□□□ -0.97
CCBE1-203ENST00000589116 CD300EQ496F6 205 aaPredicted RBP9.01□□□□□ -0.97
CCBE1-203ENST00000589116 ZFAND2AQ8N6M9 145 aa9.01□□□□□ -0.97
CCBE1-203ENST00000589116 TRAPPC1Q9Y5R8 145 aa9.01□□□□□ -0.97
CCBE1-203ENST00000589116 DEFB1P60022 68 aa9□□□□□ -0.97
CCBE1-203ENST00000589116 MRPL54Q6P161 138 aaKnown RBP9□□□□□ -0.97
CCBE1-203ENST00000589116 OR2K2Q8NGT1 345 aa9□□□□□ -0.97
CCBE1-203ENST00000589116 FRZBQ92765 325 aa9□□□□□ -0.97
CCBE1-203ENST00000589116 A0A1B0GXF2 115 aa9□□□□□ -0.97
CCBE1-203ENST00000589116 SNURFLB1AK76 121 aa9□□□□□ -0.97
CCBE1-203ENST00000589116 HLA-DQA1P01909 254 aa9□□□□□ -0.97
CCBE1-203ENST00000589116 TRAV21A0A0B4J279 112 aa8.99□□□□□ -0.97
CCBE1-203ENST00000589116 KLLNB2CW77 178 aa8.99□□□□□ -0.97
CCBE1-203ENST00000589116 SPINK4O60575 86 aa8.99□□□□□ -0.97
CCBE1-203ENST00000589116 HIST1H2BKO60814 126 aa8.99□□□□□ -0.97
CCBE1-203ENST00000589116 ORM1P02763 201 aa8.99□□□□□ -0.97
CCBE1-203ENST00000589116 PF4P02776 101 aa8.99□□□□□ -0.97
CCBE1-203ENST00000589116 S100A6P06703 90 aa8.99□□□□□ -0.97
CCBE1-203ENST00000589116 HIST1H2BJP06899 126 aa8.99□□□□□ -0.97
CCBE1-203ENST00000589116 GPX1P07203 203 aa8.99□□□□□ -0.97
CCBE1-203ENST00000589116 TRGC1P0CF51 173 aa8.99□□□□□ -0.97
CCBE1-203ENST00000589116 GZMBP10144 247 aa8.99□□□□□ -0.97
CCBE1-203ENST00000589116 HIST1H2BOP23527 126 aa8.99□□□□□ -0.97
CCBE1-203ENST00000589116 HIST1H2BBP33778 126 aa8.99□□□□□ -0.97
CCBE1-203ENST00000589116 LEPP41159 167 aa8.99□□□□□ -0.97
CCBE1-203ENST00000589116 HIST1H2BDP58876 126 aa8.99□□□□□ -0.97
CCBE1-203ENST00000589116 HIST1H2BCP62807 126 aa8.99□□□□□ -0.97
CCBE1-203ENST00000589116 HBBP68871 147 aa8.99□□□□□ -0.97
CCBE1-203ENST00000589116 FABP9Q0Z7S8 132 aa8.99□□□□□ -0.97
CCBE1-203ENST00000589116 HIST2H2BEQ16778 126 aa8.99□□□□□ -0.97
CCBE1-203ENST00000589116 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.99□□□□□ -0.97
CCBE1-203ENST00000589116 TMEM136Q6ZRR5 245 aa8.99□□□□□ -0.97
CCBE1-203ENST00000589116 HIST1H2BHQ93079 126 aa8.99□□□□□ -0.97
CCBE1-203ENST00000589116 PGLYRP4Q96LB8 373 aa8.99□□□□□ -0.97
CCBE1-203ENST00000589116 HIST1H2BNQ99877 126 aa8.99□□□□□ -0.97
CCBE1-203ENST00000589116 HIST1H2BMQ99879 126 aa8.99□□□□□ -0.97
CCBE1-203ENST00000589116 A0A1B0GUT8 65 aa8.98□□□□□ -0.97
CCBE1-203ENST00000589116 A0A1B0GW15 77 aa8.98□□□□□ -0.97
CCBE1-203ENST00000589116 PRR9Q5T870 116 aa8.98□□□□□ -0.97
CCBE1-203ENST00000589116 GDF5OSQ5U4N7 250 aa8.98□□□□□ -0.97
CCBE1-203ENST00000589116 BORCS7Q96B45 105 aa8.98□□□□□ -0.97
CCBE1-203ENST00000589116 CITED1Q99966 193 aa8.98□□□□□ -0.97
CCBE1-203ENST00000589116 MRPL18Q9H0U6 180 aaKnown RBP8.98□□□□□ -0.97
CCBE1-203ENST00000589116 ZNF256Q9Y2P7 627 aaPredicted RBP8.98□□□□□ -0.97
CCBE1-203ENST00000589116 TMSB15BA0A087X1C1 80 aa8.97□□□□□ -0.97
CCBE1-203ENST00000589116 LOC105371267A0A1B0GV96 52 aa8.97□□□□□ -0.97
CCBE1-203ENST00000589116 A8MTW9 85 aa8.97□□□□□ -0.97
CCBE1-203ENST00000589116 SAP30O75446 220 aa8.97□□□□□ -0.97
CCBE1-203ENST00000589116 IGLV1-51P01701 117 aa8.97□□□□□ -0.97
CCBE1-203ENST00000589116 S100A8P05109 93 aa8.97□□□□□ -0.97
CCBE1-203ENST00000589116 IGLC6P0CF74 106 aa8.97□□□□□ -0.97
CCBE1-203ENST00000589116 TSPOP30536 169 aa8.97□□□□□ -0.97
CCBE1-203ENST00000589116 CTRLP40313 264 aa8.97□□□□□ -0.97
CCBE1-203ENST00000589116 DEFB131AP59861 70 aa8.97□□□□□ -0.97
CCBE1-203ENST00000589116 RIGQ13278 110 aa8.97□□□□□ -0.97
CCBE1-203ENST00000589116 LINC00482Q8N8I6 264 aa8.97□□□□□ -0.97
CCBE1-203ENST00000589116 MAP6D1Q9H9H5 199 aa8.97□□□□□ -0.97
CCBE1-203ENST00000589116 IGKV3D-20A0A0C4DH25 116 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms