RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 TMEM213A2RRL7 107 aa11.64□□□□□ -0.55
MBD1-217ENST00000588937 SAMD13Q5VXD3 122 aa11.64□□□□□ -0.55
MBD1-217ENST00000588937 Q6YL49 198 aa11.64□□□□□ -0.55
MBD1-217ENST00000588937 OR10J6PQ8NGY7 276 aa11.64□□□□□ -0.55
MBD1-217ENST00000588937 PAM16Q9Y3D7 125 aa11.64□□□□□ -0.55
MBD1-217ENST00000588937 U3KQK5 164 aa11.64□□□□□ -0.55
MBD1-217ENST00000588937 ZFHX3Q15911 3703 aa11.63□□□□□ -0.55
MBD1-217ENST00000588937 IGHV1-24A0A0C4DH33 117 aa11.63□□□□□ -0.55
MBD1-217ENST00000588937 SOCS3O14543 225 aa11.63□□□□□ -0.55
MBD1-217ENST00000588937 LEPROTL1O95214 131 aa11.63□□□□□ -0.55
MBD1-217ENST00000588937 LCNL1Q6ZST4 164 aa11.63□□□□□ -0.55
MBD1-217ENST00000588937 GPHB5Q86YW7 130 aa11.63□□□□□ -0.55
MBD1-217ENST00000588937 KRTAP1-3Q8IUG1 177 aa11.63□□□□□ -0.55
MBD1-217ENST00000588937 ORMDL3Q8N138 153 aa11.63□□□□□ -0.55
MBD1-217ENST00000588937 RHPN1-AS1Q9BWJ2 59 aa11.63□□□□□ -0.55
MBD1-217ENST00000588937 TMEM191AQ9H0A3 160 aa11.63□□□□□ -0.55
MBD1-217ENST00000588937 UNC79Q9P2D8 2635 aa11.63□□□□□ -0.55
MBD1-217ENST00000588937 M0QZ24 198 aa11.62□□□□□ -0.55
MBD1-217ENST00000588937 RPL11P62913 178 aaKnown RBP11.62□□□□□ -0.55
MBD1-217ENST00000588937 TDRG1Q3Y452 100 aa11.62□□□□□ -0.55
MBD1-217ENST00000588937 EBLN2Q6P2I7 272 aa11.62□□□□□ -0.55
MBD1-217ENST00000588937 FA2HQ7L5A8 372 aa11.62□□□□□ -0.55
MBD1-217ENST00000588937 PRSS3P2Q8NHM4 247 aa11.62□□□□□ -0.55
MBD1-217ENST00000588937 TMEM70Q9BUB7 260 aa11.62□□□□□ -0.55
MBD1-217ENST00000588937 SMPXQ9UHP9 88 aa11.62□□□□□ -0.55
MBD1-217ENST00000588937 HSPB8Q9UJY1 196 aa11.62□□□□□ -0.55
MBD1-217ENST00000588937 UFC1Q9Y3C8 167 aa11.62□□□□□ -0.55
MBD1-217ENST00000588937 CR1P17927 2039 aa11.62□□□□□ -0.55
MBD1-217ENST00000588937 C2orf70A6NJV1 201 aa11.62□□□□□ -0.55
MBD1-217ENST00000588937 TMEM95Q3KNT9 176 aa11.62□□□□□ -0.55
MBD1-217ENST00000588937 ZNF575Q86XF7 245 aa11.62□□□□□ -0.55
MBD1-217ENST00000588937 AMN1Q8IY45 258 aa11.62□□□□□ -0.55
MBD1-217ENST00000588937 C20orf173Q96LM9 149 aa11.62□□□□□ -0.55
MBD1-217ENST00000588937 MIEN1Q9BRT3 115 aa11.62□□□□□ -0.55
MBD1-217ENST00000588937 AP5S1Q9NUS5 200 aa11.62□□□□□ -0.55
MBD1-217ENST00000588937 PRRC2AP48634 2157 aaKnown RBP11.61□□□□□ -0.55
MBD1-217ENST00000588937 D6R8Y8 96 aa11.61□□□□□ -0.55
MBD1-217ENST00000588937 CSN3P07498 182 aa11.61□□□□□ -0.55
MBD1-217ENST00000588937 SSTP61278 116 aa11.61□□□□□ -0.55
MBD1-217ENST00000588937 MRPL51Q4U2R6 128 aaKnown RBP11.61□□□□□ -0.55
MBD1-217ENST00000588937 TM4SF20Q53R12 229 aa11.61□□□□□ -0.55
MBD1-217ENST00000588937 PRELID3AQ96N28 172 aa11.61□□□□□ -0.55
MBD1-217ENST00000588937 IGKV3D-20A0A0C4DH25 116 aa11.6□□□□□ -0.55
MBD1-217ENST00000588937 PPBPP02775 128 aa11.6□□□□□ -0.55
MBD1-217ENST00000588937 FOXE3Q13461 319 aa11.6□□□□□ -0.55
MBD1-217ENST00000588937 SPATA45Q537H7 98 aa11.6□□□□□ -0.55
MBD1-217ENST00000588937 KLHDC1Q8N7A1 406 aa11.6□□□□□ -0.55
MBD1-217ENST00000588937 PDZD2O15018 2839 aa11.6□□□□□ -0.55
MBD1-217ENST00000588937 CREBBPQ92793 2442 aa11.59□□□□□ -0.55
MBD1-217ENST00000588937 C20orf202A1L168 122 aa11.59□□□□□ -0.55
MBD1-217ENST00000588937 CRXO43186 299 aaPredicted RBP11.59□□□□□ -0.55
MBD1-217ENST00000588937 ELANEP08246 267 aa11.59□□□□□ -0.55
MBD1-217ENST00000588937 CKS2P33552 79 aa11.59□□□□□ -0.55
MBD1-217ENST00000588937 ID1P41134 155 aa11.59□□□□□ -0.55
MBD1-217ENST00000588937 Q96MF0 132 aa11.59□□□□□ -0.55
MBD1-217ENST00000588937 MAP1LC3CQ9BXW4 147 aa11.59□□□□□ -0.55
MBD1-217ENST00000588937 ITPR2Q14571 2701 aa11.59□□□□□ -0.55
MBD1-217ENST00000588937 MUC21A0A0G2JKD1 596 aa11.59□□□□□ -0.55
MBD1-217ENST00000588937 TRBV7-9A0A0J9YWB2 115 aa11.59□□□□□ -0.55
MBD1-217ENST00000588937 MUC21A0A140T8X8 626 aa11.59□□□□□ -0.55
MBD1-217ENST00000588937 MUC21Q5SSG8 566 aa11.59□□□□□ -0.55
MBD1-217ENST00000588937 MRPL52Q86TS9 123 aaKnown RBP11.59□□□□□ -0.55
MBD1-217ENST00000588937 OR10AG1Q8NH19 301 aa11.59□□□□□ -0.55
MBD1-217ENST00000588937 FLNBO75369 2602 aaKnown RBP11.58□□□□□ -0.56
MBD1-217ENST00000588937 CACNG7P62955 275 aa11.58□□□□□ -0.56
MBD1-217ENST00000588937 ZNF705AQ6ZN79 300 aaPredicted RBP11.58□□□□□ -0.56
MBD1-217ENST00000588937 SMIM15Q7Z3B0 74 aa11.58□□□□□ -0.56
MBD1-217ENST00000588937 TEX29Q8N6K0 151 aa11.58□□□□□ -0.56
MBD1-217ENST00000588937 LAMTOR2Q9Y2Q5 125 aa11.58□□□□□ -0.56
MBD1-217ENST00000588937 TRAV21A0A0B4J279 112 aa11.57□□□□□ -0.56
MBD1-217ENST00000588937 SYS1-DBNDD2H3BUS1 97 aa11.57□□□□□ -0.56
MBD1-217ENST00000588937 C11orf21Q9P2W6 132 aa11.57□□□□□ -0.56
MBD1-217ENST00000588937 TRAV9-2A0A087WT02 112 aa11.56□□□□□ -0.56
MBD1-217ENST00000588937 M0R143 59 aa11.56□□□□□ -0.56
MBD1-217ENST00000588937 HOXA3O43365 443 aaPredicted RBP11.56□□□□□ -0.56
MBD1-217ENST00000588937 IFI27P40305 119 aaPredicted RBP11.56□□□□□ -0.56
MBD1-217ENST00000588937 PET117Q6UWS5 81 aa11.56□□□□□ -0.56
MBD1-217ENST00000588937 OR8A1Q8NGG7 326 aa11.56□□□□□ -0.56
MBD1-217ENST00000588937 FOXC2Q99958 501 aa11.56□□□□□ -0.56
MBD1-217ENST00000588937 C2orf88Q9BSF0 95 aa11.56□□□□□ -0.56
MBD1-217ENST00000588937 ZNF702PQ9H963 129 aa11.56□□□□□ -0.56
MBD1-217ENST00000588937 SIGLEC8Q9NYZ4 499 aa11.56□□□□□ -0.56
MBD1-217ENST00000588937 RPLP1P05386 114 aaKnown RBP11.56□□□□□ -0.56
MBD1-217ENST00000588937 LGALS1P09382 135 aaKnown RBP11.56□□□□□ -0.56
MBD1-217ENST00000588937 LURAP1LQ8IV03 231 aa11.56□□□□□ -0.56
MBD1-217ENST00000588937 UQCR10Q9UDW1 63 aa11.56□□□□□ -0.56
MBD1-217ENST00000588937 IGHV4-4A0A075B6R2 117 aa11.55□□□□□ -0.56
MBD1-217ENST00000588937 LOC389332A0A1B0GUA5 103 aa11.55□□□□□ -0.56
MBD1-217ENST00000588937 SNAI2O43623 268 aa11.55□□□□□ -0.56
MBD1-217ENST00000588937 ZFAND2AQ8N6M9 145 aa11.55□□□□□ -0.56
MBD1-217ENST00000588937 MYOZ3Q8TDC0 251 aa11.55□□□□□ -0.56
MBD1-217ENST00000588937 RNF185Q96GF1 192 aa11.55□□□□□ -0.56
MBD1-217ENST00000588937 FAM19A4Q96LR4 140 aa11.55□□□□□ -0.56
MBD1-217ENST00000588937 UBE2E2Q96LR5 201 aa11.55□□□□□ -0.56
MBD1-217ENST00000588937 CELSR1Q9NYQ6 3014 aa11.55□□□□□ -0.56
MBD1-217ENST00000588937 IGKV3-7A0A075B6H7 116 aa11.54□□□□□ -0.56
MBD1-217ENST00000588937 TCF21O43680 179 aa11.54□□□□□ -0.56
MBD1-217ENST00000588937 APRG1Q8IVJ8 170 aa11.54□□□□□ -0.56
MBD1-217ENST00000588937 RNF152Q8N8N0 203 aa11.54□□□□□ -0.56
MBD1-217ENST00000588937 MAP1LC3AQ9H492 121 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms