RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 ZFAND2AQ8N6M9 145 aa6.57□□□□□ -1.36
CIRBP-218ENST00000588344 Q8TAT8 98 aa6.57□□□□□ -1.36
CIRBP-218ENST00000588344 C11orf52Q96A22 123 aa6.57□□□□□ -1.36
CIRBP-218ENST00000588344 C11orf68Q9H3H3 251 aaKnown RBP6.57□□□□□ -1.36
CIRBP-218ENST00000588344 SMDT1Q9H4I9 107 aa6.57□□□□□ -1.36
CIRBP-218ENST00000588344 RETNQ9HD89 108 aa6.57□□□□□ -1.36
CIRBP-218ENST00000588344 X6R8D5 127 aa6.57□□□□□ -1.36
CIRBP-218ENST00000588344 DNAH9Q9NYC9 4486 aa6.57□□□□□ -1.36
CIRBP-218ENST00000588344 NBEAL2Q6ZNJ1 2754 aa6.56□□□□□ -1.36
CIRBP-218ENST00000588344 TRAV8-1A0A0A6YYK1 113 aa6.56□□□□□ -1.36
CIRBP-218ENST00000588344 TRAV12-3A0A0B4J271 114 aa6.56□□□□□ -1.36
CIRBP-218ENST00000588344 TMEM250H0YL14 139 aa6.56□□□□□ -1.36
CIRBP-218ENST00000588344 IGLV2-11P01706 119 aa6.56□□□□□ -1.36
CIRBP-218ENST00000588344 PRB4P10163 310 aaPredicted RBP6.56□□□□□ -1.36
CIRBP-218ENST00000588344 Q6AWC8 147 aa6.56□□□□□ -1.36
CIRBP-218ENST00000588344 COX8CQ7Z4L0 72 aa6.56□□□□□ -1.36
CIRBP-218ENST00000588344 Q8NAQ8 132 aa6.56□□□□□ -1.36
CIRBP-218ENST00000588344 SMIM12Q96EX1 92 aa6.56□□□□□ -1.36
CIRBP-218ENST00000588344 LINC00479Q96M42 142 aa6.56□□□□□ -1.36
CIRBP-218ENST00000588344 WWC2-AS2Q96NR7 200 aa6.56□□□□□ -1.36
CIRBP-218ENST00000588344 TRAV34A0A0B4J273 112 aa6.55□□□□□ -1.36
CIRBP-218ENST00000588344 IGHV4-28A0A0C4DH34 117 aa6.55□□□□□ -1.36
CIRBP-218ENST00000588344 LOC102723971A0A1B0GUV8 181 aa6.55□□□□□ -1.36
CIRBP-218ENST00000588344 SCO2A0A1W2PP80 73 aa6.55□□□□□ -1.36
CIRBP-218ENST00000588344 FABP5P3A8MUU1 101 aa6.55□□□□□ -1.36
CIRBP-218ENST00000588344 J3KRW8 73 aa6.55□□□□□ -1.36
CIRBP-218ENST00000588344 RGS13O14921 159 aa6.55□□□□□ -1.36
CIRBP-218ENST00000588344 LTAP01374 205 aa6.55□□□□□ -1.36
CIRBP-218ENST00000588344 PFN1P07737 140 aaKnown RBP6.55□□□□□ -1.36
CIRBP-218ENST00000588344 ANXA2RQ3ZCQ2 193 aa6.55□□□□□ -1.36
CIRBP-218ENST00000588344 ZNF506Q5JVG8 444 aa6.55□□□□□ -1.36
CIRBP-218ENST00000588344 FAM159AQ6UWV7 190 aa6.55□□□□□ -1.36
CIRBP-218ENST00000588344 BAGE2Q86Y30 109 aa6.55□□□□□ -1.36
CIRBP-218ENST00000588344 EIF4E3Q8N5X7 224 aaKnown RBP6.55□□□□□ -1.36
CIRBP-218ENST00000588344 C2CD4CQ8TF44 421 aa6.55□□□□□ -1.36
CIRBP-218ENST00000588344 TVP23CQ96ET8 276 aa6.55□□□□□ -1.36
CIRBP-218ENST00000588344 C16orf74Q96GX8 76 aa6.55□□□□□ -1.36
CIRBP-218ENST00000588344 KCNS1Q96KK3 526 aa6.55□□□□□ -1.36
CIRBP-218ENST00000588344 FAM210AQ96ND0 272 aa6.55□□□□□ -1.36
CIRBP-218ENST00000588344 EIF5A2Q9GZV4 153 aaKnown RBP6.55□□□□□ -1.36
CIRBP-218ENST00000588344 EDA2RQ9HAV5 297 aa6.55□□□□□ -1.36
CIRBP-218ENST00000588344 MED9Q9NWA0 146 aa6.55□□□□□ -1.36
CIRBP-218ENST00000588344 IGHV1OR15-1A0A075B7D0 117 aa6.54□□□□□ -1.36
CIRBP-218ENST00000588344 A0A0J9YWU9 116 aa6.54□□□□□ -1.36
CIRBP-218ENST00000588344 SPART-AS1P0CW21 52 aa6.54□□□□□ -1.36
CIRBP-218ENST00000588344 HTN1P15515 57 aa6.54□□□□□ -1.36
CIRBP-218ENST00000588344 RPL35P42766 123 aaKnown RBP6.54□□□□□ -1.36
CIRBP-218ENST00000588344 BTN1A1Q13410 526 aa6.54□□□□□ -1.36
CIRBP-218ENST00000588344 KIR3DS1Q14943 382 aa6.54□□□□□ -1.36
CIRBP-218ENST00000588344 PEA15Q15121 130 aa6.54□□□□□ -1.36
CIRBP-218ENST00000588344 TDRG1Q3Y452 100 aa6.54□□□□□ -1.36
CIRBP-218ENST00000588344 Q86TA4 180 aa6.54□□□□□ -1.36
CIRBP-218ENST00000588344 TMEM183AQ8IXX5 376 aa6.54□□□□□ -1.36
CIRBP-218ENST00000588344 TMEM263Q8WUH6 116 aaKnown RBP6.54□□□□□ -1.36
CIRBP-218ENST00000588344 SGK494Q96LW2 274 aa6.54□□□□□ -1.36
CIRBP-218ENST00000588344 BIN3Q9NQY0 253 aa6.54□□□□□ -1.36
CIRBP-218ENST00000588344 TIMM8BQ9Y5J9 83 aaPredicted RBP6.54□□□□□ -1.36
CIRBP-218ENST00000588344 CXorf65A6NEN9 183 aa6.53□□□□□ -1.36
CIRBP-218ENST00000588344 CBY3A6NI87 242 aa6.53□□□□□ -1.36
CIRBP-218ENST00000588344 LYRM9A8MSI8 78 aa6.53□□□□□ -1.36
CIRBP-218ENST00000588344 ZNF705GA8MUZ8 300 aaPredicted RBP6.53□□□□□ -1.36
CIRBP-218ENST00000588344 GCGP01275 180 aa6.53□□□□□ -1.36
CIRBP-218ENST00000588344 RBMY1A1P0DJD3 496 aaKnown RBP6.53□□□□□ -1.36
CIRBP-218ENST00000588344 RBMY1CP0DJD4 496 aa6.53□□□□□ -1.36
CIRBP-218ENST00000588344 GNG4P50150 75 aa6.53□□□□□ -1.36
CIRBP-218ENST00000588344 RBMY1FQ15415 496 aaKnown RBP6.53□□□□□ -1.36
CIRBP-218ENST00000588344 CLLU1Q5K131 121 aa6.53□□□□□ -1.36
CIRBP-218ENST00000588344 IBA57Q5T440 356 aaKnown RBP6.53□□□□□ -1.36
CIRBP-218ENST00000588344 FAM162BQ5T6X4 162 aa6.53□□□□□ -1.36
CIRBP-218ENST00000588344 C11orf45Q8TAV5 145 aa6.53□□□□□ -1.36
CIRBP-218ENST00000588344 MLST8Q9BVC4 326 aa6.53□□□□□ -1.36
CIRBP-218ENST00000588344 TP53TG3Q9ULZ0 132 aa6.53□□□□□ -1.36
CIRBP-218ENST00000588344 COL7A1Q02388 2944 aa6.53□□□□□ -1.36
CIRBP-218ENST00000588344 HUWE1Q7Z6Z7 4374 aaKnown RBP6.52□□□□□ -1.37
CIRBP-218ENST00000588344 TRGV11A0A075B6L2 103 aa6.52□□□□□ -1.37
CIRBP-218ENST00000588344 SNURFLB1AK76 121 aa6.52□□□□□ -1.37
CIRBP-218ENST00000588344 AZU1P20160 251 aa6.52□□□□□ -1.37
CIRBP-218ENST00000588344 DAZ2Q13117 558 aaKnown RBP6.52□□□□□ -1.37
CIRBP-218ENST00000588344 TOR2AQ5JU69 321 aa6.52□□□□□ -1.37
CIRBP-218ENST00000588344 PRR9Q5T870 116 aa6.52□□□□□ -1.37
CIRBP-218ENST00000588344 RNASE8Q8TDE3 154 aaKnown RBP6.52□□□□□ -1.37
CIRBP-218ENST00000588344 SDF2L1Q9HCN8 221 aa6.52□□□□□ -1.37
CIRBP-218ENST00000588344 C9JCJ5 164 aa6.51□□□□□ -1.37
CIRBP-218ENST00000588344 C3orf84H3BNL1 204 aa6.51□□□□□ -1.37
CIRBP-218ENST00000588344 EMP1P54849 157 aa6.51□□□□□ -1.37
CIRBP-218ENST00000588344 ZNF674Q2M3X9 581 aa6.51□□□□□ -1.37
CIRBP-218ENST00000588344 FAM74A3Q4VXF1 159 aa6.51□□□□□ -1.37
CIRBP-218ENST00000588344 C8orf49Q96NF6 230 aa6.51□□□□□ -1.37
CIRBP-218ENST00000588344 DKK2Q9UBU2 259 aa6.51□□□□□ -1.37
CIRBP-218ENST00000588344 LY96Q9Y6Y9 160 aa6.51□□□□□ -1.37
CIRBP-218ENST00000588344 TGP01266 2768 aa6.5□□□□□ -1.37
CIRBP-218ENST00000588344 RAB19A4D1S5 217 aa6.5□□□□□ -1.37
CIRBP-218ENST00000588344 DEFB4AO15263 64 aa6.5□□□□□ -1.37
CIRBP-218ENST00000588344 ORM1P02763 201 aa6.5□□□□□ -1.37
CIRBP-218ENST00000588344 ZNF80P51504 273 aaPredicted RBP6.5□□□□□ -1.37
CIRBP-218ENST00000588344 ZNF415Q09FC8 603 aa6.5□□□□□ -1.37
CIRBP-218ENST00000588344 LGALS9BQ3B8N2 356 aa6.5□□□□□ -1.37
CIRBP-218ENST00000588344 CENPWQ5EE01 88 aa6.5□□□□□ -1.37
CIRBP-218ENST00000588344 FAM222AQ5U5X8 452 aa6.5□□□□□ -1.37
CIRBP-218ENST00000588344 MUC7Q8TAX7 377 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms