RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 IGHV3-53P01767 116 aa12.92□□□□□ -0.34
TRIM47-205ENST00000587774 UBE2L3P68036 154 aaKnown RBP12.92□□□□□ -0.34
TRIM47-205ENST00000587774 SPATA12Q7Z6I5 190 aa12.92□□□□□ -0.34
TRIM47-205ENST00000587774 TRBV7-9A0A0J9YWB2 115 aa12.91□□□□□ -0.34
TRIM47-205ENST00000587774 RANP62826 216 aaKnown RBP12.91□□□□□ -0.34
TRIM47-205ENST00000587774 ZNF415Q09FC8 603 aa12.91□□□□□ -0.34
TRIM47-205ENST00000587774 FFAR4Q5NUL3 377 aa12.91□□□□□ -0.34
TRIM47-205ENST00000587774 MARVELD1Q9BSK0 173 aa12.91□□□□□ -0.34
TRIM47-205ENST00000587774 HSPB11Q9Y547 144 aa12.91□□□□□ -0.34
TRIM47-205ENST00000587774 RBAKDNA6NC62 111 aa12.9□□□□□ -0.34
TRIM47-205ENST00000587774 MPC2O95563 127 aa12.9□□□□□ -0.34
TRIM47-205ENST00000587774 CSN1S1P47710 185 aa12.9□□□□□ -0.34
TRIM47-205ENST00000587774 MUC21Q5SSG8 566 aa12.9□□□□□ -0.34
TRIM47-205ENST00000587774 SMIM3Q9BZL3 60 aa12.9□□□□□ -0.34
TRIM47-205ENST00000587774 ICOSQ9Y6W8 199 aa12.9□□□□□ -0.34
TRIM47-205ENST00000587774 PAX4O43316 350 aa12.89□□□□□ -0.35
TRIM47-205ENST00000587774 PET100P0DJ07 73 aa12.89□□□□□ -0.35
TRIM47-205ENST00000587774 ZNF266Q14584 549 aa12.89□□□□□ -0.35
TRIM47-205ENST00000587774 KHDC3LQ587J8 217 aa12.89□□□□□ -0.35
TRIM47-205ENST00000587774 LYPD1Q8N2G4 141 aa12.89□□□□□ -0.35
TRIM47-205ENST00000587774 PTTG2Q9NZH5 202 aa12.89□□□□□ -0.35
TRIM47-205ENST00000587774 SSNA1O43805 119 aa12.88□□□□□ -0.35
TRIM47-205ENST00000587774 EIF3GO75821 320 aaKnown RBP eCLIP12.88□□□□□ -0.35
TRIM47-205ENST00000587774 LINC00315P59091 139 aa12.88□□□□□ -0.35
TRIM47-205ENST00000587774 MBD2Q9UBB5 411 aa12.88□□□□□ -0.35
TRIM47-205ENST00000587774 PRO0255Q9UI72 69 aa12.88□□□□□ -0.35
TRIM47-205ENST00000587774 A6NHS1 94 aa12.87□□□□□ -0.35
TRIM47-205ENST00000587774 DIRC3C9JPN6 131 aa12.87□□□□□ -0.35
TRIM47-205ENST00000587774 SIVA1O15304 175 aa12.87□□□□□ -0.35
TRIM47-205ENST00000587774 BTF3P20290 206 aaKnown RBP12.87□□□□□ -0.35
TRIM47-205ENST00000587774 RPL12P30050 165 aaKnown RBP12.87□□□□□ -0.35
TRIM47-205ENST00000587774 CRYBA4P53673 196 aa12.87□□□□□ -0.35
TRIM47-205ENST00000587774 KRTAP10-2P60368 255 aa12.87□□□□□ -0.35
TRIM47-205ENST00000587774 MDFICQ9P1T7 246 aa12.87□□□□□ -0.35
TRIM47-205ENST00000587774 NXPH4O95158 308 aa12.86□□□□□ -0.35
TRIM47-205ENST00000587774 IFNA5P01569 189 aa12.86□□□□□ -0.35
TRIM47-205ENST00000587774 TAS2R45P59539 299 aa12.86□□□□□ -0.35
TRIM47-205ENST00000587774 FHL2Q14192 279 aa12.86□□□□□ -0.35
TRIM47-205ENST00000587774 Q6AWC8 147 aa12.86□□□□□ -0.35
TRIM47-205ENST00000587774 Q6ZRN7 208 aaPredicted RBP12.86□□□□□ -0.35
TRIM47-205ENST00000587774 MAPKAPK5-AS1Q8N8E1 139 aa12.86□□□□□ -0.35
TRIM47-205ENST00000587774 SCGB1C1Q8TD33 95 aa12.86□□□□□ -0.35
TRIM47-205ENST00000587774 C8orf49Q96NF6 230 aa12.86□□□□□ -0.35
TRIM47-205ENST00000587774 HYLS1Q96M11 299 aa12.85□□□□□ -0.35
TRIM47-205ENST00000587774 HHLA3Q9XRX5 114 aa12.85□□□□□ -0.35
TRIM47-205ENST00000587774 LENEPQ9Y5L5 61 aa12.85□□□□□ -0.35
TRIM47-205ENST00000587774 SFTA3P0C7M3 94 aa12.84□□□□□ -0.35
TRIM47-205ENST00000587774 DEFA1P59665 94 aa12.84□□□□□ -0.35
TRIM47-205ENST00000587774 DEFA3P59666 94 aa12.84□□□□□ -0.35
TRIM47-205ENST00000587774 SLAQ13239 276 aa12.84□□□□□ -0.35
TRIM47-205ENST00000587774 TMEM183BQ1AE95 376 aa12.84□□□□□ -0.35
TRIM47-205ENST00000587774 TMEM183AQ8IXX5 376 aa12.84□□□□□ -0.35
TRIM47-205ENST00000587774 WFDC1Q9HC57 220 aa12.84□□□□□ -0.35
TRIM47-205ENST00000587774 RPH3ALQ9UNE2 315 aa12.84□□□□□ -0.35
TRIM47-205ENST00000587774 TRGV4A0A0C4DH28 118 aa12.83□□□□□ -0.36
TRIM47-205ENST00000587774 MRPL23Q16540 153 aaKnown RBP12.83□□□□□ -0.36
TRIM47-205ENST00000587774 FAM159AQ6UWV7 190 aa12.83□□□□□ -0.36
TRIM47-205ENST00000587774 TMED6Q8WW62 240 aa12.83□□□□□ -0.36
TRIM47-205ENST00000587774 ZNF479Q96JC4 524 aa12.83□□□□□ -0.36
TRIM47-205ENST00000587774 OTORQ9NRC9 128 aa12.83□□□□□ -0.36
TRIM47-205ENST00000587774 NAGKQ9UJ70 344 aa12.83□□□□□ -0.36
TRIM47-205ENST00000587774 TRGV11A0A075B6L2 103 aa12.82□□□□□ -0.36
TRIM47-205ENST00000587774 LYPD5Q6UWN5 251 aa12.82□□□□□ -0.36
TRIM47-205ENST00000587774 OR10G4Q8NGN3 311 aa12.82□□□□□ -0.36
TRIM47-205ENST00000587774 PGPA6NDG6 321 aa12.81□□□□□ -0.36
TRIM47-205ENST00000587774 RAB2AP61019 212 aa12.81□□□□□ -0.36
TRIM47-205ENST00000587774 ACOT6Q3I5F7 207 aaPredicted RBP12.81□□□□□ -0.36
TRIM47-205ENST00000587774 TDRG1Q3Y452 100 aa12.81□□□□□ -0.36
TRIM47-205ENST00000587774 NEGR1Q7Z3B1 354 aa12.81□□□□□ -0.36
TRIM47-205ENST00000587774 CMTM2Q8TAZ6 248 aa12.81□□□□□ -0.36
TRIM47-205ENST00000587774 RASL10AQ92737 203 aa12.81□□□□□ -0.36
TRIM47-205ENST00000587774 SPXQ9BT56 116 aa12.81□□□□□ -0.36
TRIM47-205ENST00000587774 F6UZH7 168 aa12.8□□□□□ -0.36
TRIM47-205ENST00000587774 K7EQD1 137 aa12.8□□□□□ -0.36
TRIM47-205ENST00000587774 HMGB3O15347 200 aaKnown RBP12.8□□□□□ -0.36
TRIM47-205ENST00000587774 FAM74A1Q5RGS3 127 aa12.8□□□□□ -0.36
TRIM47-205ENST00000587774 PQLC2Q6ZP29 291 aa12.8□□□□□ -0.36
TRIM47-205ENST00000587774 GOLT1AQ6ZVE7 132 aa12.8□□□□□ -0.36
TRIM47-205ENST00000587774 IQCF2Q8IXL9 164 aa12.8□□□□□ -0.36
TRIM47-205ENST00000587774 TRAV8-1A0A0A6YYK1 113 aa12.79□□□□□ -0.36
TRIM47-205ENST00000587774 A0A1W2PPV4 95 aa12.79□□□□□ -0.36
TRIM47-205ENST00000587774 SRIP30626 198 aa12.79□□□□□ -0.36
TRIM47-205ENST00000587774 GNG5P63218 68 aa12.79□□□□□ -0.36
TRIM47-205ENST00000587774 TNFRSF18Q9Y5U5 241 aa12.79□□□□□ -0.36
TRIM47-205ENST00000587774 GYPEP15421 78 aa12.78□□□□□ -0.36
TRIM47-205ENST00000587774 WFDC10BQ8IUB3 73 aa12.78□□□□□ -0.36
TRIM47-205ENST00000587774 PCNPQ8WW12 178 aaKnown RBP12.78□□□□□ -0.36
TRIM47-205ENST00000587774 TVP23CQ96ET8 276 aa12.78□□□□□ -0.36
TRIM47-205ENST00000587774 TRAV4A0A0B4J268 109 aa12.77□□□□□ -0.37
TRIM47-205ENST00000587774 TRAV21A0A0B4J279 112 aa12.77□□□□□ -0.37
TRIM47-205ENST00000587774 IGHV3-16A0A0C4DH30 117 aa12.77□□□□□ -0.37
TRIM47-205ENST00000587774 GNRH2O43555 120 aa12.77□□□□□ -0.37
TRIM47-205ENST00000587774 TYMSP04818 313 aa12.77□□□□□ -0.37
TRIM47-205ENST00000587774 ARL14EPLP0DKL9 152 aa12.77□□□□□ -0.37
TRIM47-205ENST00000587774 Q8N1X5 172 aa12.77□□□□□ -0.37
TRIM47-205ENST00000587774 ARL6IP6Q8N6S5 226 aa12.77□□□□□ -0.37
TRIM47-205ENST00000587774 OR10G9Q8NGN4 311 aa12.77□□□□□ -0.37
TRIM47-205ENST00000587774 OR10G7Q8NGN6 311 aa12.77□□□□□ -0.37
TRIM47-205ENST00000587774 LY96Q9Y6Y9 160 aa12.77□□□□□ -0.37
TRIM47-205ENST00000587774 M0R2P5 195 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms