RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 WDR73Q6P4I2 378 aa14.92□□□□□ -0.02
TRIM47-204ENST00000587339 RBPMS2Q6ZRY4 209 aaKnown RBP14.92□□□□□ -0.02
TRIM47-204ENST00000587339 TMEM189A5PLL7 270 aa14.92□□□□□ -0.02
TRIM47-204ENST00000587339 SAV1Q9H4B6 383 aaPredicted RBP14.92□□□□□ -0.02
TRIM47-204ENST00000587339 SETD2Q9BYW2 2564 aaPredicted RBP14.92□□□□□ -0.02
TRIM47-204ENST00000587339 FN1P02751 2386 aaKnown RBP14.91□□□□□ -0.02
TRIM47-204ENST00000587339 XKRY2A2RUG3 117 aa14.91□□□□□ -0.02
TRIM47-204ENST00000587339 C5orf52A6NGY3 159 aa14.91□□□□□ -0.02
TRIM47-204ENST00000587339 CSN3P07498 182 aa14.91□□□□□ -0.02
TRIM47-204ENST00000587339 ZNF688P0C7X2 276 aa14.91□□□□□ -0.02
TRIM47-204ENST00000587339 RASL11AQ6T310 242 aa14.91□□□□□ -0.02
TRIM47-204ENST00000587339 PGLYRP4Q96LB8 373 aa14.91□□□□□ -0.02
TRIM47-204ENST00000587339 MT-ND6P03923 174 aa14.9□□□□□ -0.02
TRIM47-204ENST00000587339 FOXA3P55318 350 aaPredicted RBP14.9□□□□□ -0.02
TRIM47-204ENST00000587339 RAB4BP61018 213 aa14.9□□□□□ -0.02
TRIM47-204ENST00000587339 PSMG4Q5JS54 123 aa14.9□□□□□ -0.02
TRIM47-204ENST00000587339 ATP5L2Q7Z4Y8 100 aa14.9□□□□□ -0.02
TRIM47-204ENST00000587339 NDUFA6P56556 154 aa14.9□□□□□ -0.02
TRIM47-204ENST00000587339 DYNLRB2Q8TF09 96 aa14.9□□□□□ -0.02
TRIM47-204ENST00000587339 MRPL18Q9H0U6 180 aaKnown RBP14.9□□□□□ -0.02
TRIM47-204ENST00000587339 SETXQ7Z333 2677 aaKnown RBP14.89□□□□□ -0.03
TRIM47-204ENST00000587339 TMSB15BA0A087X1C1 80 aa14.89□□□□□ -0.03
TRIM47-204ENST00000587339 TMEM136Q6ZRR5 245 aa14.89□□□□□ -0.03
TRIM47-204ENST00000587339 ORM1P02763 201 aa14.88□□□□□ -0.03
TRIM47-204ENST00000587339 HLA-DQA1P01909 254 aa14.88□□□□□ -0.03
TRIM47-204ENST00000587339 Q6AWC8 147 aa14.88□□□□□ -0.03
TRIM47-204ENST00000587339 CAMPP49913 170 aa14.87□□□□□ -0.03
TRIM47-204ENST00000587339 RPS20P60866 119 aaKnown RBP14.87□□□□□ -0.03
TRIM47-204ENST00000587339 TMEM61Q8N0U2 210 aa14.87□□□□□ -0.03
TRIM47-204ENST00000587339 A0A1B0GXF2 115 aa14.86□□□□□ -0.03
TRIM47-204ENST00000587339 HBBP68871 147 aa14.86□□□□□ -0.03
TRIM47-204ENST00000587339 TPPP3Q9BW30 176 aa14.86□□□□□ -0.03
TRIM47-204ENST00000587339 DEFB114Q30KQ6 69 aa14.86□□□□□ -0.03
TRIM47-204ENST00000587339 ZFAND2AQ8N6M9 145 aa14.86□□□□□ -0.03
TRIM47-204ENST00000587339 FAM19A4Q96LR4 140 aa14.86□□□□□ -0.03
TRIM47-204ENST00000587339 TRBV7-9A0A0J9YWB2 115 aa14.85□□□□□ -0.03
TRIM47-204ENST00000587339 ADARB2-AS1A8MUL3 147 aa14.85□□□□□ -0.03
TRIM47-204ENST00000587339 UBE2CO00762 179 aa14.85□□□□□ -0.03
TRIM47-204ENST00000587339 NSUN5P1Q3KNT7 163 aa14.85□□□□□ -0.03
TRIM47-204ENST00000587339 LINC01559Q495D7 138 aa14.85□□□□□ -0.03
TRIM47-204ENST00000587339 GDF5OSQ5U4N7 250 aa14.85□□□□□ -0.03
TRIM47-204ENST00000587339 A0A1B0GUS0 222 aa14.84□□□□□ -0.03
TRIM47-204ENST00000587339 A0A1B0GUT8 65 aa14.84□□□□□ -0.03
TRIM47-204ENST00000587339 J3KRW8 73 aa14.84□□□□□ -0.03
TRIM47-204ENST00000587339 CD33P20138 364 aa14.84□□□□□ -0.03
TRIM47-204ENST00000587339 PRR9Q5T870 116 aa14.84□□□□□ -0.03
TRIM47-204ENST00000587339 TRAV2A0A0B4J234 112 aa14.84□□□□□ -0.03
TRIM47-204ENST00000587339 GPX1P07203 203 aa14.84□□□□□ -0.03
TRIM47-204ENST00000587339 EBLN2Q6P2I7 272 aa14.84□□□□□ -0.03
TRIM47-204ENST00000587339 A0A0J9YX75 114 aa14.83□□□□□ -0.04
TRIM47-204ENST00000587339 ARMS2P0C7Q2 107 aa14.83□□□□□ -0.04
TRIM47-204ENST00000587339 KRTAP10-3P60369 221 aa14.83□□□□□ -0.04
TRIM47-204ENST00000587339 CD300EQ496F6 205 aaPredicted RBP14.83□□□□□ -0.04
TRIM47-204ENST00000587339 BORCS7Q96B45 105 aa14.83□□□□□ -0.04
TRIM47-204ENST00000587339 PCP4L1A6NKN8 68 aa14.82□□□□□ -0.04
TRIM47-204ENST00000587339 APCSP02743 223 aa14.82□□□□□ -0.04
TRIM47-204ENST00000587339 CRISP2P16562 243 aa14.82□□□□□ -0.04
TRIM47-204ENST00000587339 HOXA5P20719 270 aa14.82□□□□□ -0.04
TRIM47-204ENST00000587339 LYZL1Q6UWQ5 148 aa14.82□□□□□ -0.04
TRIM47-204ENST00000587339 ZNF575Q86XF7 245 aa14.82□□□□□ -0.04
TRIM47-204ENST00000587339 NDUFA11Q86Y39 141 aa14.82□□□□□ -0.04
TRIM47-204ENST00000587339 SIGLEC8Q9NYZ4 499 aa14.82□□□□□ -0.04
TRIM47-204ENST00000587339 C11orf21Q9P2W6 132 aa14.82□□□□□ -0.04
TRIM47-204ENST00000587339 IGKV3D-20A0A0C4DH25 116 aa14.82□□□□□ -0.04
TRIM47-204ENST00000587339 SLAQ13239 276 aa14.82□□□□□ -0.04
TRIM47-204ENST00000587339 RIGQ13278 110 aa14.82□□□□□ -0.04
TRIM47-204ENST00000587339 FER1L6-AS1Q8NA97 138 aa14.82□□□□□ -0.04
TRIM47-204ENST00000587339 BAHCC1Q9P281 2608 aa14.81□□□□□ -0.04
TRIM47-204ENST00000587339 TRAV21A0A0B4J279 112 aa14.81□□□□□ -0.04
TRIM47-204ENST00000587339 GRIFINA4D1Z8 144 aa14.81□□□□□ -0.04
TRIM47-204ENST00000587339 Q6ZQT7 251 aa14.81□□□□□ -0.04
TRIM47-204ENST00000587339 APRG1Q8IVJ8 170 aa14.81□□□□□ -0.04
TRIM47-204ENST00000587339 SSBP4Q9BWG4 385 aaPredicted RBP14.81□□□□□ -0.04
TRIM47-204ENST00000587339 F8P00451 2351 aa14.81□□□□□ -0.04
TRIM47-204ENST00000587339 KIAA1644Q3SXP7 199 aa14.8□□□□□ -0.04
TRIM47-204ENST00000587339 FOXI2Q6ZQN5 318 aa14.8□□□□□ -0.04
TRIM47-204ENST00000587339 SPAG8Q99932 426 aaPredicted RBP14.8□□□□□ -0.04
TRIM47-204ENST00000587339 C2CD3Q4AC94 2353 aa14.8□□□□□ -0.04
TRIM47-204ENST00000587339 IGLC6P0CF74 106 aa14.8□□□□□ -0.04
TRIM47-204ENST00000587339 RNASE4P34096 147 aaKnown RBP14.8□□□□□ -0.04
TRIM47-204ENST00000587339 S100A12P80511 92 aa14.8□□□□□ -0.04
TRIM47-204ENST00000587339 TRAV25A0A0B4J276 109 aa14.79□□□□□ -0.04
TRIM47-204ENST00000587339 A0A1B0GW15 77 aa14.79□□□□□ -0.04
TRIM47-204ENST00000587339 OR4C46A6NHA9 309 aa14.79□□□□□ -0.04
TRIM47-204ENST00000587339 DUSP14O95147 198 aaKnown RBP14.79□□□□□ -0.04
TRIM47-204ENST00000587339 AKR1D1P51857 326 aa14.79□□□□□ -0.04
TRIM47-204ENST00000587339 DEFB131AP59861 70 aa14.79□□□□□ -0.04
TRIM47-204ENST00000587339 KIR3DS1Q14943 382 aa14.79□□□□□ -0.04
TRIM47-204ENST00000587339 GFI1BQ5VTD9 330 aa14.79□□□□□ -0.04
TRIM47-204ENST00000587339 ODF3Q96PU9 254 aa14.79□□□□□ -0.04
TRIM47-204ENST00000587339 KLLNB2CW77 178 aa14.78□□□□□ -0.04
TRIM47-204ENST00000587339 IGKV3-20P01619 116 aa14.78□□□□□ -0.04
TRIM47-204ENST00000587339 S100A8P05109 93 aa14.78□□□□□ -0.04
TRIM47-204ENST00000587339 CTRLP40313 264 aa14.78□□□□□ -0.04
TRIM47-204ENST00000587339 COA6Q5JTJ3 125 aaKnown RBP14.78□□□□□ -0.04
TRIM47-204ENST00000587339 SSTP61278 116 aa14.78□□□□□ -0.04
TRIM47-204ENST00000587339 NAGKQ9UJ70 344 aa14.78□□□□□ -0.04
TRIM47-204ENST00000587339 WNK1Q9H4A3 2382 aa14.77□□□□□ -0.05
TRIM47-204ENST00000587339 MUC21A0A0G2JKD1 596 aa14.76□□□□□ -0.05
TRIM47-204ENST00000587339 MUC21A0A140T8X8 626 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms