RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 GNG5P63218 68 aa5.87□□□□□ -1.47
VMP1-204ENST00000587259 Q6AWC8 147 aa5.87□□□□□ -1.47
VMP1-204ENST00000587259 WDR73Q6P4I2 378 aa5.87□□□□□ -1.47
VMP1-204ENST00000587259 EXOC3-AS1Q8N2X6 119 aa5.87□□□□□ -1.47
VMP1-204ENST00000587259 GBGT1Q8N5D6 347 aa5.87□□□□□ -1.47
VMP1-204ENST00000587259 GLMPQ8WWB7 406 aa5.87□□□□□ -1.47
VMP1-204ENST00000587259 MLST8Q9BVC4 326 aa5.87□□□□□ -1.47
VMP1-204ENST00000587259 GFRA4Q9GZZ7 299 aa5.87□□□□□ -1.47
VMP1-204ENST00000587259 V9GYV3 84 aa5.87□□□□□ -1.47
VMP1-204ENST00000587259 TGIF2-C20orf24A0A0A6YYL0 155 aa5.86□□□□□ -1.47
VMP1-204ENST00000587259 IGHV3-35A0A0C4DH35 117 aa5.86□□□□□ -1.47
VMP1-204ENST00000587259 IGHV7-4-1A0A0J9YVY3 117 aa5.86□□□□□ -1.47
VMP1-204ENST00000587259 ZNF320A2RRD8 509 aa5.86□□□□□ -1.47
VMP1-204ENST00000587259 IZUMO1RA6ND01 250 aa5.86□□□□□ -1.47
VMP1-204ENST00000587259 A8MWL6 223 aa5.86□□□□□ -1.47
VMP1-204ENST00000587259 SLC17A3O00476 420 aa5.86□□□□□ -1.47
VMP1-204ENST00000587259 EREGO14944 169 aa5.86□□□□□ -1.47
VMP1-204ENST00000587259 IGLV2-8P01709 118 aa5.86□□□□□ -1.47
VMP1-204ENST00000587259 P01737 135 aa5.86□□□□□ -1.47
VMP1-204ENST00000587259 CXCL1P09341 107 aa5.86□□□□□ -1.47
VMP1-204ENST00000587259 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.86□□□□□ -1.47
VMP1-204ENST00000587259 COX8CQ7Z4L0 72 aa5.86□□□□□ -1.47
VMP1-204ENST00000587259 ATP5L2Q7Z4Y8 100 aa5.86□□□□□ -1.47
VMP1-204ENST00000587259 PRNTQ86SH4 94 aa5.86□□□□□ -1.47
VMP1-204ENST00000587259 KRTAP9-9Q9BYP9 154 aa5.86□□□□□ -1.47
VMP1-204ENST00000587259 KRTAP9-4Q9BYQ2 154 aa5.86□□□□□ -1.47
VMP1-204ENST00000587259 RPP21Q9H633 154 aaKnown RBP5.86□□□□□ -1.47
VMP1-204ENST00000587259 NAT8BQ9UHF3 227 aa5.86□□□□□ -1.47
VMP1-204ENST00000587259 PSG8Q9UQ74 426 aa5.86□□□□□ -1.47
VMP1-204ENST00000587259 SELENOKQ9Y6D0 94 aa5.86□□□□□ -1.47
VMP1-204ENST00000587259 TRAV34A0A0B4J273 112 aa5.85□□□□□ -1.47
VMP1-204ENST00000587259 SMIM27A0A1W2PRY6 76 aa5.85□□□□□ -1.47
VMP1-204ENST00000587259 H3BTX0 84 aa5.85□□□□□ -1.47
VMP1-204ENST00000587259 CHEK1O14757 476 aa5.85□□□□□ -1.47
VMP1-204ENST00000587259 IGLV1-51P01701 117 aa5.85□□□□□ -1.47
VMP1-204ENST00000587259 S100A8P05109 93 aa5.85□□□□□ -1.47
VMP1-204ENST00000587259 ID1P41134 155 aa5.85□□□□□ -1.47
VMP1-204ENST00000587259 OR5I1Q13606 314 aa5.85□□□□□ -1.47
VMP1-204ENST00000587259 TSKUQ8WUA8 353 aa5.85□□□□□ -1.47
VMP1-204ENST00000587259 C16orf92Q96LL3 132 aa5.85□□□□□ -1.47
VMP1-204ENST00000587259 WFDC10AQ9H1F0 79 aa5.85□□□□□ -1.47
VMP1-204ENST00000587259 NRN1Q9NPD7 142 aa5.85□□□□□ -1.47
VMP1-204ENST00000587259 PEMTQ9UBM1 199 aa5.85□□□□□ -1.47
VMP1-204ENST00000587259 LENEPQ9Y5L5 61 aa5.85□□□□□ -1.47
VMP1-204ENST00000587259 TRBV7-9A0A0J9YWB2 115 aa5.84□□□□□ -1.47
VMP1-204ENST00000587259 A0A1B0GW15 77 aa5.84□□□□□ -1.47
VMP1-204ENST00000587259 C19orf71A6NCJ1 209 aa5.84□□□□□ -1.47
VMP1-204ENST00000587259 NPIPB6E9PJ23 425 aa5.84□□□□□ -1.47
VMP1-204ENST00000587259 IGLV2-11P01706 119 aa5.84□□□□□ -1.47
VMP1-204ENST00000587259 TRBV12-3P01733 135 aa5.84□□□□□ -1.47
VMP1-204ENST00000587259 HLA-DQA1P01909 254 aa5.84□□□□□ -1.47
VMP1-204ENST00000587259 SNRPCP09234 159 aaKnown RBP5.84□□□□□ -1.47
VMP1-204ENST00000587259 EDN2P20800 178 aa5.84□□□□□ -1.47
VMP1-204ENST00000587259 RPS20P60866 119 aaKnown RBP5.84□□□□□ -1.47
VMP1-204ENST00000587259 ACTL10Q5JWF8 245 aa5.84□□□□□ -1.47
VMP1-204ENST00000587259 FAM162BQ5T6X4 162 aa5.84□□□□□ -1.47
VMP1-204ENST00000587259 TMEM78Q5T7P6 136 aa5.84□□□□□ -1.47
VMP1-204ENST00000587259 LCN12Q6JVE5 192 aa5.84□□□□□ -1.47
VMP1-204ENST00000587259 PRR27Q6MZM9 219 aa5.84□□□□□ -1.47
VMP1-204ENST00000587259 UNQ9165/PRO28630Q6UXU0 137 aa5.84□□□□□ -1.47
VMP1-204ENST00000587259 NUDT10Q8NFP7 164 aa5.84□□□□□ -1.47
VMP1-204ENST00000587259 BORCS7Q96B45 105 aa5.84□□□□□ -1.47
VMP1-204ENST00000587259 NUDT11Q96G61 164 aa5.84□□□□□ -1.47
VMP1-204ENST00000587259 LINC00479Q96M42 142 aa5.84□□□□□ -1.47
VMP1-204ENST00000587259 C17orf77Q96MU5 243 aa5.84□□□□□ -1.47
VMP1-204ENST00000587259 SPATA25Q9BR10 227 aa5.84□□□□□ -1.47
VMP1-204ENST00000587259 RHPN1-AS1Q9BWJ2 59 aa5.84□□□□□ -1.47
VMP1-204ENST00000587259 RNASE7Q9H1E1 156 aaKnown RBP5.84□□□□□ -1.47
VMP1-204ENST00000587259 PPP1R14DQ9NXH3 145 aa5.84□□□□□ -1.47
VMP1-204ENST00000587259 SMPXQ9UHP9 88 aa5.84□□□□□ -1.47
VMP1-204ENST00000587259 IGHV3OR16-8A0A075B7F1 116 aa5.83□□□□□ -1.48
VMP1-204ENST00000587259 M0R3E3 92 aa5.83□□□□□ -1.48
VMP1-204ENST00000587259 ZNF207O43670 478 aaKnown RBP5.83□□□□□ -1.48
VMP1-204ENST00000587259 SYNJ2BPP57105 145 aa5.83□□□□□ -1.48
VMP1-204ENST00000587259 PAFAH1B2P68402 229 aa5.83□□□□□ -1.48
VMP1-204ENST00000587259 SMUG1Q53HV7 270 aa5.83□□□□□ -1.48
VMP1-204ENST00000587259 RBPMS2Q6ZRY4 209 aaKnown RBP5.83□□□□□ -1.48
VMP1-204ENST00000587259 C9orf47Q6ZRZ4 202 aa5.83□□□□□ -1.48
VMP1-204ENST00000587259 NHLRC2Q8NBF2 726 aa5.83□□□□□ -1.48
VMP1-204ENST00000587259 OR10J6PQ8NGY7 276 aa5.83□□□□□ -1.48
VMP1-204ENST00000587259 GNB1LQ9BYB4 327 aa5.83□□□□□ -1.48
VMP1-204ENST00000587259 TRAPPC1Q9Y5R8 145 aa5.83□□□□□ -1.48
VMP1-204ENST00000587259 TRAV8-1A0A0A6YYK1 113 aa5.82□□□□□ -1.48
VMP1-204ENST00000587259 TRAV2A0A0B4J234 112 aa5.82□□□□□ -1.48
VMP1-204ENST00000587259 LOC105371267A0A1B0GV96 52 aa5.82□□□□□ -1.48
VMP1-204ENST00000587259 A8MZ25 164 aa5.82□□□□□ -1.48
VMP1-204ENST00000587259 TRGC2P03986 189 aa5.82□□□□□ -1.48
VMP1-204ENST00000587259 ZNF138P52744 262 aa5.82□□□□□ -1.48
VMP1-204ENST00000587259 SNRPD3P62318 126 aaKnown RBP5.82□□□□□ -1.48
VMP1-204ENST00000587259 RPL11P62913 178 aaKnown RBP5.82□□□□□ -1.48
VMP1-204ENST00000587259 DEFB125Q8N687 156 aa5.82□□□□□ -1.48
VMP1-204ENST00000587259 ZNF738Q8NE65 137 aa5.82□□□□□ -1.48
VMP1-204ENST00000587259 ZC2HC1AQ96GY0 325 aa5.82□□□□□ -1.48
VMP1-204ENST00000587259 LINC00477Q96M19 166 aa5.82□□□□□ -1.48
VMP1-204ENST00000587259 PLECQ15149 4684 aaKnown RBP5.82□□□□□ -1.48
VMP1-204ENST00000587259 ALMS1Q8TCU4 4167 aa5.81□□□□□ -1.48
VMP1-204ENST00000587259 IGKV2-40A0A087WW87 121 aaPredicted RBP5.81□□□□□ -1.48
VMP1-204ENST00000587259 IGHV3-49A0A0A0MS15 119 aa5.81□□□□□ -1.48
VMP1-204ENST00000587259 IGHV3-66A0A0C4DH42 116 aa5.81□□□□□ -1.48
VMP1-204ENST00000587259 TMEM213A2RRL7 107 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms