RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 TRAV12-2A0A075B6T6 113 aa12.37□□□□□ -0.43
PRKCSH-203ENST00000586486 C7orf71A4D174 169 aa12.37□□□□□ -0.43
PRKCSH-203ENST00000586486 C9JCJ5 164 aa12.37□□□□□ -0.43
PRKCSH-203ENST00000586486 CENPWQ5EE01 88 aa12.37□□□□□ -0.43
PRKCSH-203ENST00000586486 COMMD7Q86VX2 200 aa12.37□□□□□ -0.43
PRKCSH-203ENST00000586486 BAGE2Q86Y30 109 aa12.37□□□□□ -0.43
PRKCSH-203ENST00000586486 TMEM183AQ8IXX5 376 aa12.37□□□□□ -0.43
PRKCSH-203ENST00000586486 MLST8Q9BVC4 326 aa12.37□□□□□ -0.43
PRKCSH-203ENST00000586486 FBN3Q75N90 2809 aa12.36□□□□□ -0.43
PRKCSH-203ENST00000586486 GNG4P50150 75 aa12.36□□□□□ -0.43
PRKCSH-203ENST00000586486 SMUG1Q53HV7 270 aa12.36□□□□□ -0.43
PRKCSH-203ENST00000586486 Q6AWC8 147 aa12.36□□□□□ -0.43
PRKCSH-203ENST00000586486 SBSPONQ8IVN8 264 aa12.36□□□□□ -0.43
PRKCSH-203ENST00000586486 C8orf49Q96NF6 230 aa12.36□□□□□ -0.43
PRKCSH-203ENST00000586486 TP53TG1Q9Y2A0 90 aa12.36□□□□□ -0.43
PRKCSH-203ENST00000586486 J3KRW8 73 aa12.35□□□□□ -0.43
PRKCSH-203ENST00000586486 CEBPGP53567 150 aa12.35□□□□□ -0.43
PRKCSH-203ENST00000586486 BTN1A1Q13410 526 aa12.35□□□□□ -0.43
PRKCSH-203ENST00000586486 DEFB135Q30KP9 77 aa12.35□□□□□ -0.43
PRKCSH-203ENST00000586486 RBMY1A1P0DJD3 496 aaKnown RBP12.34□□□□□ -0.43
PRKCSH-203ENST00000586486 RBMY1CP0DJD4 496 aa12.34□□□□□ -0.43
PRKCSH-203ENST00000586486 RBMY1FQ15415 496 aaKnown RBP12.34□□□□□ -0.43
PRKCSH-203ENST00000586486 ZNF674Q2M3X9 581 aa12.34□□□□□ -0.43
PRKCSH-203ENST00000586486 FAM74A3Q4VXF1 159 aa12.34□□□□□ -0.43
PRKCSH-203ENST00000586486 ZNF705AQ6ZN79 300 aaPredicted RBP12.34□□□□□ -0.43
PRKCSH-203ENST00000586486 C1orf158Q8N1D5 194 aa12.34□□□□□ -0.43
PRKCSH-203ENST00000586486 TMEM256Q8N2U0 113 aa12.34□□□□□ -0.43
PRKCSH-203ENST00000586486 RNF183Q96D59 192 aa12.34□□□□□ -0.43
PRKCSH-203ENST00000586486 RCHY1Q96PM5 261 aa12.34□□□□□ -0.43
PRKCSH-203ENST00000586486 SMIM7Q9BQ49 75 aa12.34□□□□□ -0.43
PRKCSH-203ENST00000586486 TM2D3Q9BRN9 247 aa12.34□□□□□ -0.43
PRKCSH-203ENST00000586486 ZNF324O75467 553 aaPredicted RBP12.33□□□□□ -0.43
PRKCSH-203ENST00000586486 RNASE4P34096 147 aaKnown RBP12.33□□□□□ -0.43
PRKCSH-203ENST00000586486 ZC2HC1AQ96GY0 325 aa12.33□□□□□ -0.43
PRKCSH-203ENST00000586486 NIPSNAP3BQ9BS92 247 aa12.33□□□□□ -0.43
PRKCSH-203ENST00000586486 GOLT1BQ9Y3E0 138 aa12.33□□□□□ -0.43
PRKCSH-203ENST00000586486 TRAV12-3A0A0B4J271 114 aa12.33□□□□□ -0.44
PRKCSH-203ENST00000586486 ZNF727A8MUV8 499 aa12.33□□□□□ -0.44
PRKCSH-203ENST00000586486 GCGP01275 180 aa12.33□□□□□ -0.44
PRKCSH-203ENST00000586486 IGLV2-8P01709 118 aa12.33□□□□□ -0.44
PRKCSH-203ENST00000586486 NHLRC2Q8NBF2 726 aa12.33□□□□□ -0.44
PRKCSH-203ENST00000586486 SPATA25Q9BR10 227 aa12.33□□□□□ -0.44
PRKCSH-203ENST00000586486 LY96Q9Y6Y9 160 aa12.33□□□□□ -0.44
PRKCSH-203ENST00000586486 TRAV21A0A0B4J279 112 aa12.32□□□□□ -0.44
PRKCSH-203ENST00000586486 H7BYZ3 331 aa12.32□□□□□ -0.44
PRKCSH-203ENST00000586486 PFN1P07737 140 aaKnown RBP12.32□□□□□ -0.44
PRKCSH-203ENST00000586486 SFTA3P0C7M3 94 aa12.32□□□□□ -0.44
PRKCSH-203ENST00000586486 ZNF80P51504 273 aaPredicted RBP12.32□□□□□ -0.44
PRKCSH-203ENST00000586486 SOHLH1Q5JUK2 328 aa12.32□□□□□ -0.44
PRKCSH-203ENST00000586486 SPRY2O43597 315 aa12.31□□□□□ -0.44
PRKCSH-203ENST00000586486 OVOL2Q9BRP0 275 aa12.31□□□□□ -0.44
PRKCSH-203ENST00000586486 PRKDCP78527 4128 aaKnown RBP12.31□□□□□ -0.44
PRKCSH-203ENST00000586486 PGPEP1LA6NFU8 196 aa12.3□□□□□ -0.44
PRKCSH-203ENST00000586486 FAM162BQ5T6X4 162 aa12.3□□□□□ -0.44
PRKCSH-203ENST00000586486 NEU1Q99519 415 aa12.3□□□□□ -0.44
PRKCSH-203ENST00000586486 PYGO2Q9BRQ0 406 aa12.3□□□□□ -0.44
PRKCSH-203ENST00000586486 LINC00467Q9BRT7 94 aa12.3□□□□□ -0.44
PRKCSH-203ENST00000586486 TMEM208Q9BTX3 173 aa12.3□□□□□ -0.44
PRKCSH-203ENST00000586486 CRIP1P50238 77 aa12.29□□□□□ -0.44
PRKCSH-203ENST00000586486 Q6ZQT7 251 aa12.29□□□□□ -0.44
PRKCSH-203ENST00000586486 BIN3Q9NQY0 253 aa12.29□□□□□ -0.44
PRKCSH-203ENST00000586486 FABP5P3A8MUU1 101 aa12.29□□□□□ -0.44
PRKCSH-203ENST00000586486 OCC1Q8TAD7 63 aa12.29□□□□□ -0.44
PRKCSH-203ENST00000586486 LINC01587Q99440 93 aa12.29□□□□□ -0.44
PRKCSH-203ENST00000586486 RETNQ9HD89 108 aa12.29□□□□□ -0.44
PRKCSH-203ENST00000586486 X6R8D5 127 aa12.29□□□□□ -0.44
PRKCSH-203ENST00000586486 NBEAL2Q6ZNJ1 2754 aa12.28□□□□□ -0.44
PRKCSH-203ENST00000586486 IGHV3OR16-12A0A075B7B8 117 aa12.28□□□□□ -0.44
PRKCSH-203ENST00000586486 TMEM218A2RU14 115 aa12.28□□□□□ -0.44
PRKCSH-203ENST00000586486 SMIM9A6NGZ8 99 aa12.28□□□□□ -0.44
PRKCSH-203ENST00000586486 SH2D1AO60880 128 aa12.28□□□□□ -0.44
PRKCSH-203ENST00000586486 NHLRC4P0CG21 123 aaPredicted RBP12.28□□□□□ -0.44
PRKCSH-203ENST00000586486 MGST1P10620 155 aaKnown RBP12.28□□□□□ -0.44
PRKCSH-203ENST00000586486 TMEM241Q24JQ0 296 aa12.28□□□□□ -0.44
PRKCSH-203ENST00000586486 TDRG1Q3Y452 100 aa12.28□□□□□ -0.44
PRKCSH-203ENST00000586486 LINC01551Q86U37 167 aa12.28□□□□□ -0.44
PRKCSH-203ENST00000586486 OR11H2Q8NH07 326 aa12.28□□□□□ -0.44
PRKCSH-203ENST00000586486 ZMAT4Q9H898 229 aa12.28□□□□□ -0.44
PRKCSH-203ENST00000586486 NAT8Q9UHE5 227 aa12.28□□□□□ -0.44
PRKCSH-203ENST00000586486 IGHV1OR15-1A0A075B7D0 117 aa12.27□□□□□ -0.44
PRKCSH-203ENST00000586486 K7EN84 100 aa12.27□□□□□ -0.44
PRKCSH-203ENST00000586486 MIFP14174 115 aa12.26□□□□□ -0.45
PRKCSH-203ENST00000586486 NDUFA5Q16718 116 aa12.26□□□□□ -0.45
PRKCSH-203ENST00000586486 PRR27Q6MZM9 219 aa12.26□□□□□ -0.45
PRKCSH-203ENST00000586486 C11orf21Q9P2W6 132 aa12.26□□□□□ -0.45
PRKCSH-203ENST00000586486 DNAH9Q9NYC9 4486 aa12.26□□□□□ -0.45
PRKCSH-203ENST00000586486 C19orf71A6NCJ1 209 aa12.26□□□□□ -0.45
PRKCSH-203ENST00000586486 ANXA2RQ3ZCQ2 193 aa12.26□□□□□ -0.45
PRKCSH-203ENST00000586486 FAM159AQ6UWV7 190 aa12.26□□□□□ -0.45
PRKCSH-203ENST00000586486 KCNS1Q96KK3 526 aa12.26□□□□□ -0.45
PRKCSH-203ENST00000586486 ADCYAP1P18509 176 aa12.25□□□□□ -0.45
PRKCSH-203ENST00000586486 OR5I1Q13606 314 aa12.25□□□□□ -0.45
PRKCSH-203ENST00000586486 RRN3P1Q2M238 152 aa12.25□□□□□ -0.45
PRKCSH-203ENST00000586486 LINC01559Q495D7 138 aa12.25□□□□□ -0.45
PRKCSH-203ENST00000586486 MUC21Q5SSG8 566 aa12.25□□□□□ -0.45
PRKCSH-203ENST00000586486 SEC11CQ9BY50 192 aa12.25□□□□□ -0.45
PRKCSH-203ENST00000586486 SDF2L1Q9HCN8 221 aa12.25□□□□□ -0.45
PRKCSH-203ENST00000586486 ZNF705GA8MUZ8 300 aaPredicted RBP12.24□□□□□ -0.45
PRKCSH-203ENST00000586486 RPL23P62829 140 aaKnown RBP12.24□□□□□ -0.45
PRKCSH-203ENST00000586486 Q8NAQ8 132 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms